RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 SEPT11Q9NVA2 429 aaKnown RBP20.05■□□□□ 0.8
SS18-208ENST00000577751 POLR3BQ9NW08 1133 aaPredicted RBP20.05■□□□□ 0.8
SS18-208ENST00000577751 TMEM51Q9NW97 253 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 ADAM22Q9P0K1 906 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 CAPN11Q9UMQ6 739 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 PCDHGA2Q9Y5H1 932 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 MYO15AQ9UKN7 3530 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 LILRB5O75023 590 aa20.04■□□□□ 0.8
SS18-208ENST00000577751 MOCS2O96007 188 aaPredicted RBP20.04■□□□□ 0.8
SS18-208ENST00000577751 TPM3P06753 285 aa20.04■□□□□ 0.8
SS18-208ENST00000577751 TNFAIP3P21580 790 aa20.04■□□□□ 0.8
SS18-208ENST00000577751 HOXC13P31276 330 aa20.04■□□□□ 0.8
SS18-208ENST00000577751 C1QBPQ07021 282 aaKnown RBP20.04■□□□□ 0.8
SS18-208ENST00000577751 NME3Q13232 169 aa20.04■□□□□ 0.8
SS18-208ENST00000577751 MTA1Q13330 715 aa20.04■□□□□ 0.8
SS18-208ENST00000577751 DMC1Q14565 340 aa20.04■□□□□ 0.8
SS18-208ENST00000577751 MS4A13Q5J8X5 152 aa20.04■□□□□ 0.8
SS18-208ENST00000577751 ZNF571Q7Z3V5 609 aaPredicted RBP20.04■□□□□ 0.8
SS18-208ENST00000577751 CAMKK1Q8N5S9 505 aa20.04■□□□□ 0.8
SS18-208ENST00000577751 SYN2Q92777 582 aaPredicted RBP20.04■□□□□ 0.8
SS18-208ENST00000577751 MYEOVQ96EZ4 313 aa20.04■□□□□ 0.8
SS18-208ENST00000577751 PRICKLE1Q96MT3 831 aaPredicted RBP20.04■□□□□ 0.8
SS18-208ENST00000577751 PRMT1Q99873 361 aaKnown RBP20.04■□□□□ 0.8
SS18-208ENST00000577751 METTL5Q9NRN9 209 aaKnown RBP20.04■□□□□ 0.8
SS18-208ENST00000577751 PIGVQ9NUD9 493 aa20.04■□□□□ 0.8
SS18-208ENST00000577751 SLC12A6Q9UHW9 1150 aa20.04■□□□□ 0.8
SS18-208ENST00000577751 MMP17Q9ULZ9 603 aa20.04■□□□□ 0.8
SS18-208ENST00000577751 SLC8A2Q9UPR5 921 aa20.04■□□□□ 0.8
SS18-208ENST00000577751 SYNJ2BP-COX16A0A087WUM0 186 aa20.03■□□□□ 0.8
SS18-208ENST00000577751 TCRBV5S1A1TA0A578 114 aa20.03■□□□□ 0.8
SS18-208ENST00000577751 F9P00740 461 aa20.03■□□□□ 0.8
SS18-208ENST00000577751 GYPCP04921 128 aa20.03■□□□□ 0.8
SS18-208ENST00000577751 CALB1P05937 261 aa20.03■□□□□ 0.8
SS18-208ENST00000577751 ABCB4P21439 1286 aa20.03■□□□□ 0.8
SS18-208ENST00000577751 TIE1P35590 1138 aa20.03■□□□□ 0.8
SS18-208ENST00000577751 CXCR3P49682 368 aa20.03■□□□□ 0.8
SS18-208ENST00000577751 SULT1E1P49888 294 aa20.03■□□□□ 0.8
SS18-208ENST00000577751 ZBED6P86452 979 aa20.03■□□□□ 0.8
SS18-208ENST00000577751 DMWDQ09019 674 aa20.03■□□□□ 0.8
SS18-208ENST00000577751 KLHL30Q0D2K2 578 aa20.03■□□□□ 0.8
SS18-208ENST00000577751 GEN1Q17RS7 908 aa20.03■□□□□ 0.8
SS18-208ENST00000577751 ZC3H14Q6PJT7 736 aaKnown RBP20.03■□□□□ 0.8
SS18-208ENST00000577751 ALLCQ8N6M5 410 aa20.03■□□□□ 0.8
SS18-208ENST00000577751 TBCBQ99426 244 aa20.03■□□□□ 0.8
SS18-208ENST00000577751 COX16Q9P0S2 106 aa20.03■□□□□ 0.8
SS18-208ENST00000577751 R4GN57 208 aa20.03■□□□□ 0.8
SS18-208ENST00000577751 CCDC163A0A0D9SF12 145 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 CBFA2T2O43439 604 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 ADAM23O75077 832 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 ENDOD1O94919 500 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 TACR2P21452 398 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 CRY1Q16526 586 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 BRMS1LQ5PSV4 323 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 RAP1GAP2Q684P5 730 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 HGSNATQ68CP4 663 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 PPP1R2P3Q6NXS1 205 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 KIAA0907Q7Z7F0 614 aaPredicted RBP20.02■□□□□ 0.8
SS18-208ENST00000577751 PHLDB2Q86SQ0 1253 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 MCOLN2Q8IZK6 566 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 CCDC33Q8N5R6 958 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 EMC1Q8N766 993 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 ZNF513Q8N8E2 541 aaPredicted RBP20.02■□□□□ 0.8
SS18-208ENST00000577751 TXNDC5Q8NBS9 432 aaKnown RBP20.02■□□□□ 0.8
SS18-208ENST00000577751 C3orf20Q8ND61 904 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 JOSD2Q8TAC2 188 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 RNF34Q969K3 372 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 VCPIP1Q96JH7 1222 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 CFAP57Q96MR6 1250 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 SEMA4AQ9H3S1 761 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 WDCPQ9H6R7 721 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 ARHGEF38Q9NXL2 777 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 TAS2R14Q9NYV8 317 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 DMDP11532 3685 aa20.02■□□□□ 0.8
SS18-208ENST00000577751 C2CD4BA6NLJ0 364 aa20.01■□□□□ 0.79
SS18-208ENST00000577751 SIGLEC16A6NMB1 481 aa20.01■□□□□ 0.79
SS18-208ENST00000577751 SGK1O00141 431 aa20.01■□□□□ 0.79
SS18-208ENST00000577751 TBL1XO60907 577 aa20.01■□□□□ 0.79
SS18-208ENST00000577751 KLF8O95600 359 aaPredicted RBP20.01■□□□□ 0.79
SS18-208ENST00000577751 KRT3P12035 628 aa20.01■□□□□ 0.79
SS18-208ENST00000577751 GZMAP12544 262 aa20.01■□□□□ 0.79
SS18-208ENST00000577751 SKILP12757 684 aa20.01■□□□□ 0.79
SS18-208ENST00000577751 HNRNPLP14866 589 aaKnown RBP eCLIP20.01■□□□□ 0.791e-9■■■■■ 30.1
SS18-208ENST00000577751 HLA-FP30511 346 aa20.01■□□□□ 0.79
SS18-208ENST00000577751 FNTBP49356 437 aa20.01■□□□□ 0.79
SS18-208ENST00000577751 RPS24P62847 133 aaKnown RBP20.01■□□□□ 0.79
SS18-208ENST00000577751 DEUP1Q05D60 604 aa20.01■□□□□ 0.79
SS18-208ENST00000577751 EOGTQ5NDL2 527 aa20.01■□□□□ 0.79
SS18-208ENST00000577751 EGFLAMQ63HQ2 1017 aa20.01■□□□□ 0.79
SS18-208ENST00000577751 ANKS1BQ7Z6G8 1248 aa20.01■□□□□ 0.79
SS18-208ENST00000577751 LONP2Q86WA8 852 aa20.01■□□□□ 0.79
SS18-208ENST00000577751 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.01■□□□□ 0.79
SS18-208ENST00000577751 HJURPQ8NCD3 748 aaPredicted RBP20.01■□□□□ 0.79
SS18-208ENST00000577751 CPLX3Q8WVH0 158 aa20.01■□□□□ 0.79
SS18-208ENST00000577751 ATRIPQ8WXE1 791 aa20.01■□□□□ 0.79
SS18-208ENST00000577751 ZDHHC4Q9NPG8 344 aa20.01■□□□□ 0.79
SS18-208ENST00000577751 ANLNQ9NQW6 1124 aa20.01■□□□□ 0.79
SS18-208ENST00000577751 LUC7L2Q9Y383 392 aaKnown RBP20.01■□□□□ 0.79
SS18-208ENST00000577751 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.01■□□□□ 0.79
SS18-208ENST00000577751 BZW2Q9Y6E2 419 aaKnown RBP20.01■□□□□ 0.79
SS18-208ENST00000577751 USP34Q70CQ2 3546 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms