RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 PLOD1Q02809 727 aaPredicted RBP9.05□□□□□ -0.96
CDH8-203ENST00000577390 ANKRD13AQ8IZ07 590 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 HEMGNQ9BXL5 484 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 CHMP1AQ9HD42 196 aaPredicted RBP9.05□□□□□ -0.96
CDH8-203ENST00000577390 WBP11Q9Y2W2 641 aaKnown RBP9.05□□□□□ -0.96
CDH8-203ENST00000577390 TTC3P53804 2025 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 PCP4L1A6NKN8 68 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 PGM2Q96G03 612 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 NCKAP5LQ9HCH0 1330 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 SH3D21A4FU49 640 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 ANO7Q6IWH7 933 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 GRAMD1CQ8IYS0 662 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 BTBD10Q9BSF8 475 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 WWP1Q9H0M0 922 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 A6NHS1 94 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 MBL2P11226 248 aaPredicted RBP9.05□□□□□ -0.96
CDH8-203ENST00000577390 MYL4P12829 197 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 ENO3P13929 434 aaPredicted RBP9.05□□□□□ -0.96
CDH8-203ENST00000577390 RPL9P32969 192 aaKnown RBP9.05□□□□□ -0.96
CDH8-203ENST00000577390 KDSRQ06136 332 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.05□□□□□ -0.96
CDH8-203ENST00000577390 MRPS31Q92665 395 aaKnown RBP9.05□□□□□ -0.96
CDH8-203ENST00000577390 TRABDQ9H4I3 376 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 C20orf96Q9NUD7 363 aaPredicted RBP9.05□□□□□ -0.96
CDH8-203ENST00000577390 FAM20BO75063 409 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 URODP06132 367 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 PTPN7P35236 360 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 RTP1P59025 263 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 MPP2Q14168 576 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 AASDHQ4L235 1098 aaPredicted RBP9.04□□□□□ -0.96
CDH8-203ENST00000577390 CLEC4GQ6UXB4 293 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 CYFIP1Q7L576 1253 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 SSH3Q8TE77 659 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 CHST12Q9NRB3 414 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 TUBGCP6Q96RT7 1819 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 RRN3P2A6NIE6 340 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 CPSF4O95639 269 aaKnown RBP9.04□□□□□ -0.96
CDH8-203ENST00000577390 ASNSP08243 561 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 STARP49675 285 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 CERCAMQ5T4B2 595 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 TTC33Q6PID6 262 aaPredicted RBP9.04□□□□□ -0.96
CDH8-203ENST00000577390 APOBEC3FQ8IUX4 373 aaKnown RBP9.04□□□□□ -0.96
CDH8-203ENST00000577390 TAMM41Q96BW9 452 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 ZNF560Q96MR9 790 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 TRIM51Q9BSJ1 452 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 TNKS2Q9H2K2 1166 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 NOL6Q9H6R4 1146 aaKnown RBP9.04□□□□□ -0.96
CDH8-203ENST00000577390 GPR75-ASB3A0A0A6YYF3 556 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 TEX46H3BTG2 121 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 PHF2O75151 1096 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 PTPN12Q05209 780 aaKnown RBP9.04□□□□□ -0.96
CDH8-203ENST00000577390 ZNF846Q147U1 533 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 PDK3Q15120 406 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 KIAA1324Q6UXG2 1013 aaKnown RBP9.04□□□□□ -0.96
CDH8-203ENST00000577390 LRRC6Q86X45 466 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 MS4A14Q96JA4 679 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 TLR7Q9NYK1 1049 aaKnown RBP9.04□□□□□ -0.96
CDH8-203ENST00000577390 EFR3BQ9Y2G0 817 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 ZNF510Q9Y2H8 683 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 ASB3Q9Y575 518 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 E7EWF7 191 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 KLHL41O60662 606 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 ZC3H11AO75152 810 aaKnown RBP eCLIP9.04□□□□□ -0.96
CDH8-203ENST00000577390 STAG3L1P0CL83 205 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 MSH3P20585 1137 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 RGS1Q08116 209 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 GPS1Q13098 491 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 FNDC3BQ53EP0 1204 aaKnown RBP9.04□□□□□ -0.96
CDH8-203ENST00000577390 CACHD1Q5VU97 1274 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 LIN54Q6MZP7 749 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 ALKBH5Q6P6C2 394 aaKnown RBP9.04□□□□□ -0.96
CDH8-203ENST00000577390 TMC7Q7Z402 723 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 GALNT7Q86SF2 657 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 RHOT2Q8IXI1 618 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 MAGEE2Q8TD90 523 aaPredicted RBP9.04□□□□□ -0.96
CDH8-203ENST00000577390 GPRASP2Q96D09 838 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 ROGDIQ9GZN7 287 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 ETNK2Q9NVF9 386 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 MCUBQ9NWR8 336 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 SLC9A2Q9UBY0 812 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 ATP10DQ9P241 1426 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 MAGI3Q5TCQ9 1506 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 KCNN4O15554 427 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 GEMIN4P57678 1058 aaKnown RBP9.04□□□□□ -0.96
CDH8-203ENST00000577390 ACOX1Q15067 660 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 EFHD2Q96C19 240 aaPredicted RBP9.04□□□□□ -0.96
CDH8-203ENST00000577390 ITPKCQ96DU7 683 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 MNTQ99583 582 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 VTA1Q9NP79 307 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 MTMR4Q9NYA4 1195 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 WHRNQ9P202 907 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 C2orf81A6NN90 581 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 A8MUI8 341 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 ZNF432O94892 652 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 TTKP33981 857 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 OR6Y1Q8NGX8 325 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 CKAP2Q8WWK9 683 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 ARID1BQ8NFD5 2236 aaPredicted RBP9.04□□□□□ -0.96
CDH8-203ENST00000577390 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.04□□□□□ -0.96
CDH8-203ENST00000577390 PDGFRBP09619 1106 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms