RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 C11orf16Q9NQ32 467 aa16.86■□□□□ 0.29
PFN1-203ENST00000574872 ARHGEF38Q9NXL2 777 aa16.86■□□□□ 0.29
PFN1-203ENST00000574872 CTTNBP2NLQ9P2B4 639 aa16.86■□□□□ 0.29
PFN1-203ENST00000574872 MTF2Q9Y483 593 aaPredicted RBP16.86■□□□□ 0.29
PFN1-203ENST00000574872 KANSL1LA0AUZ9 987 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 I6L893 689 aaPredicted RBP16.85■□□□□ 0.29
PFN1-203ENST00000574872 HOXC11O43248 304 aaPredicted RBP16.85■□□□□ 0.29
PFN1-203ENST00000574872 ENDOD1O94919 500 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 CYBBP04839 570 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 TACR2P21452 398 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 TARSP26639 723 aaKnown RBP16.85■□□□□ 0.29
PFN1-203ENST00000574872 OPRD1P41143 372 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 MLLT6P55198 1093 aaPredicted RBP16.85■□□□□ 0.29
PFN1-203ENST00000574872 AMPD2Q01433 879 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 KDSRQ06136 332 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 SPA17Q15506 151 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 MS4A13Q5J8X5 152 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 BRMS1LQ5PSV4 323 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 FYB2Q5VWT5 728 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 CWF19L1Q69YN2 538 aaKnown RBP16.85■□□□□ 0.29
PFN1-203ENST00000574872 SCYL2Q6P3W7 929 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 STRADAQ7RTN6 431 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 TMEM139Q8IV31 216 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 LGI2Q8N0V4 545 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 ZNF564Q8TBZ8 553 aaPredicted RBP16.85■□□□□ 0.29
PFN1-203ENST00000574872 CENPIQ92674 756 aaPredicted RBP16.85■□□□□ 0.29
PFN1-203ENST00000574872 MSANTD3Q96H12 275 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 PRICKLE1Q96MT3 831 aaPredicted RBP16.85■□□□□ 0.29
PFN1-203ENST00000574872 P2RY13Q9BPV8 354 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 DDX50Q9BQ39 737 aaKnown RBP16.85■□□□□ 0.29
PFN1-203ENST00000574872 FBRSL1Q9HCM7 1045 aaKnown RBP16.85■□□□□ 0.29
PFN1-203ENST00000574872 LTB4R2Q9NPC1 389 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 MARK1Q9P0L2 795 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 ANAPC7Q9UJX3 599 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 PAXBP1Q9Y5B6 917 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 HS3ST4Q9Y661 456 aa16.85■□□□□ 0.29
PFN1-203ENST00000574872 EPN1Q9Y6I3 576 aaPredicted RBP16.85■□□□□ 0.29
PFN1-203ENST00000574872 ZDBF2Q9HCK1 2354 aa16.84■□□□□ 0.29
PFN1-203ENST00000574872 FAM170BA6NMN3 283 aa16.84■□□□□ 0.29
PFN1-203ENST00000574872 TRIM24O15164 1050 aa16.84■□□□□ 0.29
PFN1-203ENST00000574872 NDUFA10O95299 355 aa16.84■□□□□ 0.29
PFN1-203ENST00000574872 TMEM253P0C7T8 217 aa16.84■□□□□ 0.29
PFN1-203ENST00000574872 DESP17661 470 aa16.84■□□□□ 0.29
PFN1-203ENST00000574872 MAGEA1P43355 309 aa16.84■□□□□ 0.29
PFN1-203ENST00000574872 GALK1P51570 392 aa16.84■□□□□ 0.29
PFN1-203ENST00000574872 RPS24P62847 133 aaKnown RBP16.84■□□□□ 0.29
PFN1-203ENST00000574872 MESP2Q0VG99 397 aa16.84■□□□□ 0.29
PFN1-203ENST00000574872 GSE1Q14687 1217 aa16.84■□□□□ 0.29
PFN1-203ENST00000574872 MPPE1Q53F39 396 aa16.84■□□□□ 0.29
PFN1-203ENST00000574872 DAB2IPQ5VWQ8 1189 aa16.84■□□□□ 0.29
PFN1-203ENST00000574872 CFAP52Q8N1V2 620 aa16.84■□□□□ 0.29
PFN1-203ENST00000574872 CCDC185Q8N715 623 aa16.84■□□□□ 0.29
PFN1-203ENST00000574872 CD101Q93033 1021 aa16.84■□□□□ 0.29
PFN1-203ENST00000574872 TMA16Q96EY4 203 aaKnown RBP16.84■□□□□ 0.29
PFN1-203ENST00000574872 DNAJC17Q9NVM6 304 aaKnown RBP16.84■□□□□ 0.29
PFN1-203ENST00000574872 STIM2Q9P246 746 aa16.84■□□□□ 0.29
PFN1-203ENST00000574872 TFR2Q9UP52 801 aa16.84■□□□□ 0.29
PFN1-203ENST00000574872 EIF3CLB5ME19 914 aaKnown RBP16.83■□□□□ 0.28
PFN1-203ENST00000574872 F5H5T6 163 aa16.83■□□□□ 0.28
PFN1-203ENST00000574872 GFRA2O00451 464 aa16.83■□□□□ 0.28
PFN1-203ENST00000574872 TBL1XO60907 577 aa16.83■□□□□ 0.28
PFN1-203ENST00000574872 TULP3O75386 442 aa16.83■□□□□ 0.28
PFN1-203ENST00000574872 PENKP01210 267 aaPredicted RBP16.83■□□□□ 0.28
PFN1-203ENST00000574872 HOXD9P28356 352 aaPredicted RBP16.83■□□□□ 0.28
PFN1-203ENST00000574872 AUHQ13825 339 aaKnown RBP16.83■□□□□ 0.28
PFN1-203ENST00000574872 C1orf228Q6PIY5 440 aa16.83■□□□□ 0.28
PFN1-203ENST00000574872 C14orf80Q86SX3 495 aa16.83■□□□□ 0.28
PFN1-203ENST00000574872 CIR1Q86X95 450 aaPredicted RBP16.83■□□□□ 0.28
PFN1-203ENST00000574872 SFTPA1Q8IWL2 248 aa16.83■□□□□ 0.28
PFN1-203ENST00000574872 ETFBKMTQ8IXQ9 262 aa16.83■□□□□ 0.28
PFN1-203ENST00000574872 HJURPQ8NCD3 748 aaPredicted RBP16.83■□□□□ 0.28
PFN1-203ENST00000574872 ACRBPQ8NEB7 543 aa16.83■□□□□ 0.28
PFN1-203ENST00000574872 PJA1Q8NG27 643 aa16.83■□□□□ 0.28
PFN1-203ENST00000574872 FNIP1Q8TF40 1166 aa16.83■□□□□ 0.28
PFN1-203ENST00000574872 XPO6Q96QU8 1125 aaKnown RBP16.83■□□□□ 0.28
PFN1-203ENST00000574872 EIF3CQ99613 913 aaKnown RBP16.83■□□□□ 0.28
PFN1-203ENST00000574872 PRMT1Q99873 361 aaKnown RBP16.83■□□□□ 0.28
PFN1-203ENST00000574872 OSGEPQ9NPF4 335 aa16.83■□□□□ 0.28
PFN1-203ENST00000574872 RBM12Q9NTZ6 932 aaKnown RBP16.83■□□□□ 0.28
PFN1-203ENST00000574872 VANGL2Q9ULK5 521 aa16.83■□□□□ 0.28
PFN1-203ENST00000574872 CLEC4EQ9ULY5 219 aa16.83■□□□□ 0.28
PFN1-203ENST00000574872 MRPS17Q9Y2R5 130 aaKnown RBP16.83■□□□□ 0.28
PFN1-203ENST00000574872 PCDHA13Q9Y5I0 950 aa16.83■□□□□ 0.28
PFN1-203ENST00000574872 TYW5A2RUC4 315 aaKnown RBP16.82■□□□□ 0.28
PFN1-203ENST00000574872 TMEM110-MUSTN1A8MSY1 372 aa16.82■□□□□ 0.28
PFN1-203ENST00000574872 PI15O43692 258 aa16.82■□□□□ 0.28
PFN1-203ENST00000574872 CACNG3O60359 315 aa16.82■□□□□ 0.28
PFN1-203ENST00000574872 IPO7O95373 1038 aaKnown RBP16.82■□□□□ 0.28
PFN1-203ENST00000574872 LCA5LO95447 670 aa16.82■□□□□ 0.28
PFN1-203ENST00000574872 EGFP01133 1207 aa16.82■□□□□ 0.28
PFN1-203ENST00000574872 DCNP07585 359 aaKnown RBP16.82■□□□□ 0.28
PFN1-203ENST00000574872 IRAK1P51617 712 aa16.82■□□□□ 0.28
PFN1-203ENST00000574872 GRSF1Q12849 480 aaKnown RBP eCLIP16.82■□□□□ 0.28
PFN1-203ENST00000574872 ARL13BQ3SXY8 428 aa16.82■□□□□ 0.28
PFN1-203ENST00000574872 TMEM196Q5HYL7 178 aa16.82■□□□□ 0.28
PFN1-203ENST00000574872 TMEM31Q5JXX7 168 aa16.82■□□□□ 0.28
PFN1-203ENST00000574872 C10orf76Q5T2E6 689 aa16.82■□□□□ 0.28
PFN1-203ENST00000574872 GRAMD4Q6IC98 578 aa16.82■□□□□ 0.28
PFN1-203ENST00000574872 FSTL4Q6MZW2 842 aa16.82■□□□□ 0.28
PFN1-203ENST00000574872 FBXL22Q6P050 247 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms