RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 GPR149Q86SP6 731 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 RFX6Q8HWS3 928 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 ATP6V0D2Q8N8Y2 350 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 BTN2A3PQ96KV6 586 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 CSPG4P5Q96PW8 444 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 CLEC1BQ9P126 229 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 HS3ST4Q9Y661 456 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 TBX10O75333 385 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 DDX6P26196 483 aaKnown RBP eCLIP24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 DYNLT1P63172 113 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 SLC7A9P82251 487 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 DLX2Q07687 328 aaPredicted RBP24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 SEMA3BQ13214 749 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 PIK3R6Q5UE93 754 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 UNC45BQ8IWX7 931 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 TTC16Q8NEE8 873 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 NAP1L3Q99457 506 aaPredicted RBP24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 OSBPL2Q9H1P3 480 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 TASP1Q9H6P5 420 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 CLDND1Q9NY35 253 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 SLC12A6Q9UHW9 1150 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 NR2E1Q9Y466 385 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 CORO1AP31146 461 aaKnown RBP24.87■■□□□ 1.57
ATPAF1-213ENST00000574428 ARL4AP40617 200 aa24.87■■□□□ 1.57
ATPAF1-213ENST00000574428 HARS2P49590 506 aaKnown RBP24.87■■□□□ 1.57
ATPAF1-213ENST00000574428 KLF1Q13351 362 aaPredicted RBP24.87■■□□□ 1.57
ATPAF1-213ENST00000574428 ZDHHC14Q8IZN3 488 aa24.87■■□□□ 1.57
ATPAF1-213ENST00000574428 CEP112Q8N8E3 955 aa24.87■■□□□ 1.57
ATPAF1-213ENST00000574428 PCDH19Q8TAB3 1148 aa24.87■■□□□ 1.57
ATPAF1-213ENST00000574428 ADAMTS19Q8TE59 1207 aa24.87■■□□□ 1.57
ATPAF1-213ENST00000574428 RNF157Q96PX1 679 aa24.87■■□□□ 1.57
ATPAF1-213ENST00000574428 H3BRJ5 948 aa24.86■■□□□ 1.57
ATPAF1-213ENST00000574428 EEF2KO00418 725 aaKnown RBP24.86■■□□□ 1.57
ATPAF1-213ENST00000574428 KRIT1O00522 736 aa24.86■■□□□ 1.57
ATPAF1-213ENST00000574428 KLKB1P03952 638 aa24.86■■□□□ 1.57
ATPAF1-213ENST00000574428 PFKLP17858 780 aa24.86■■□□□ 1.57
ATPAF1-213ENST00000574428 CTC1Q2NKJ3 1217 aa24.86■■□□□ 1.57
ATPAF1-213ENST00000574428 MS4A13Q5J8X5 152 aa24.86■■□□□ 1.57
ATPAF1-213ENST00000574428 VSIG1Q86XK7 387 aa24.86■■□□□ 1.57
ATPAF1-213ENST00000574428 DENND1CQ8IV53 801 aa24.86■■□□□ 1.57
ATPAF1-213ENST00000574428 CMTM8Q8IZV2 173 aa24.86■■□□□ 1.57
ATPAF1-213ENST00000574428 FAF2Q96CS3 445 aa24.86■■□□□ 1.57
ATPAF1-213ENST00000574428 ZSWIM3Q96MP5 696 aa24.86■■□□□ 1.57
ATPAF1-213ENST00000574428 GAS2L1Q99501 681 aaPredicted RBP24.86■■□□□ 1.57
ATPAF1-213ENST00000574428 MAK16Q9BXY0 300 aaKnown RBP24.86■■□□□ 1.57
ATPAF1-213ENST00000574428 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.86■■□□□ 1.57
ATPAF1-213ENST00000574428 V9GYY5 206 aaPredicted RBP24.86■■□□□ 1.57
ATPAF1-213ENST00000574428 SCAMP3O14828 347 aaKnown RBP24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 CST8O60676 142 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 LRIG2O94898 1065 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 TJP3O95049 919 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 HOXB8P17481 243 aaPredicted RBP24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 AVPR1AP37288 418 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 TPI1P60174 286 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 C2orf54Q08AI8 447 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 CBX2Q14781 532 aaPredicted RBP24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 CLUL1Q15846 466 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 POTEHQ6S545 545 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 RFX8Q6ZV50 586 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 ZNF572Q7Z3I7 529 aaPredicted RBP24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 PQLC3Q8N755 202 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 SPATA4Q8NEY3 305 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 EPAS1Q99814 870 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 RBM12Q9NTZ6 932 aaKnown RBP24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 RCOR3Q9P2K3 495 aaPredicted RBP24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 ZNF487B1APH4 448 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 MLLT6P55198 1093 aaPredicted RBP24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 SIX1Q15475 284 aaPredicted RBP24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 RAP1GAP2Q684P5 730 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 NADSYN1Q6IA69 706 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 C14orf80Q86SX3 495 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 MNS1Q8NEH6 495 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 HAUS1Q96CS2 278 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 ARHGEF4Q9NR80 690 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 CCL26Q9Y258 94 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 EFR3BQ9Y2G0 817 aa24.85■■□□□ 1.57
ATPAF1-213ENST00000574428 GOLGA6L7A0A1B0GV03 622 aa24.84■■□□□ 1.57
ATPAF1-213ENST00000574428 CTAGE15A4D2H0 777 aa24.84■■□□□ 1.57
ATPAF1-213ENST00000574428 CTAGE8P0CG41 777 aa24.84■■□□□ 1.57
ATPAF1-213ENST00000574428 AMPD1P23109 780 aa24.84■■□□□ 1.57
ATPAF1-213ENST00000574428 FSHRP23945 695 aa24.84■■□□□ 1.57
ATPAF1-213ENST00000574428 CTAGE6Q86UF2 777 aa24.84■■□□□ 1.57
ATPAF1-213ENST00000574428 CTAGE4Q8IX94 777 aa24.84■■□□□ 1.57
ATPAF1-213ENST00000574428 C1orf74Q96LT6 269 aa24.84■■□□□ 1.57
ATPAF1-213ENST00000574428 ADAM7Q9H2U9 754 aa24.84■■□□□ 1.57
ATPAF1-213ENST00000574428 CFAP97Q9P2B7 532 aa24.84■■□□□ 1.57
ATPAF1-213ENST00000574428 ARHGAP26Q9UNA1 814 aa24.84■■□□□ 1.57
ATPAF1-213ENST00000574428 R3HDM2Q9Y2K5 976 aaKnown RBP24.84■■□□□ 1.57
ATPAF1-213ENST00000574428 CLUHO75153 1309 aa24.84■■□□□ 1.57
ATPAF1-213ENST00000574428 ACSL4O60488 711 aa24.83■■□□□ 1.57
ATPAF1-213ENST00000574428 SLC11A2P49281 568 aa24.83■■□□□ 1.57
ATPAF1-213ENST00000574428 AUHQ13825 339 aaKnown RBP24.83■■□□□ 1.57
ATPAF1-213ENST00000574428 DPYSQ14117 519 aa24.83■■□□□ 1.57
ATPAF1-213ENST00000574428 ARTNQ5T4W7 220 aa24.83■■□□□ 1.57
ATPAF1-213ENST00000574428 BBS12Q6ZW61 710 aa24.83■■□□□ 1.57
ATPAF1-213ENST00000574428 FAM118BQ9BPY3 351 aa24.83■■□□□ 1.57
ATPAF1-213ENST00000574428 AGO1Q9UL18 857 aaKnown RBP24.83■■□□□ 1.57
ATPAF1-213ENST00000574428 VANGL2Q9ULK5 521 aa24.83■■□□□ 1.57
ATPAF1-213ENST00000574428 NEU3Q9UQ49 428 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms