RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 MS4A13Q5J8X5 152 aa16.28■□□□□ 0.2
CCNE1-204ENST00000574121 NADSYN1Q6IA69 706 aa16.28■□□□□ 0.2
CCNE1-204ENST00000574121 TRIM67Q6ZTA4 783 aa16.28■□□□□ 0.2
CCNE1-204ENST00000574121 TMEM25Q86YD3 366 aa16.28■□□□□ 0.2
CCNE1-204ENST00000574121 ZNF557Q8N988 423 aaPredicted RBP16.28■□□□□ 0.2
CCNE1-204ENST00000574121 BBS2Q9BXC9 721 aa16.28■□□□□ 0.2
CCNE1-204ENST00000574121 MRPS17Q9Y2R5 130 aaKnown RBP16.28■□□□□ 0.2
CCNE1-204ENST00000574121 REXO2Q9Y3B8 237 aaKnown RBP16.28■□□□□ 0.2
CCNE1-204ENST00000574121 TYW5A2RUC4 315 aaKnown RBP16.27■□□□□ 0.2
CCNE1-204ENST00000574121 BTNL10A8MVZ5 291 aa16.27■□□□□ 0.2
CCNE1-204ENST00000574121 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.27■□□□□ 0.2
CCNE1-204ENST00000574121 F5H5T6 163 aa16.27■□□□□ 0.2
CCNE1-204ENST00000574121 CACNG3O60359 315 aa16.27■□□□□ 0.2
CCNE1-204ENST00000574121 TACR2P21452 398 aa16.27■□□□□ 0.2
CCNE1-204ENST00000574121 MAN1A1P33908 653 aa16.27■□□□□ 0.2
CCNE1-204ENST00000574121 ATXN1P54253 815 aaKnown RBP16.27■□□□□ 0.2
CCNE1-204ENST00000574121 ANO4Q32M45 955 aa16.27■□□□□ 0.2
CCNE1-204ENST00000574121 PREPLQ4J6C6 727 aaPredicted RBP16.27■□□□□ 0.2
CCNE1-204ENST00000574121 PIK3R6Q5UE93 754 aa16.27■□□□□ 0.2
CCNE1-204ENST00000574121 TTC39BQ5VTQ0 682 aaPredicted RBP16.27■□□□□ 0.2
CCNE1-204ENST00000574121 RNF43Q68DV7 783 aa16.27■□□□□ 0.2
CCNE1-204ENST00000574121 ZNF852Q6ZMS4 543 aa16.27■□□□□ 0.2
CCNE1-204ENST00000574121 TPGS1Q6ZTW0 290 aa16.27■□□□□ 0.2
CCNE1-204ENST00000574121 TPRG1Q6ZUI0 275 aa16.27■□□□□ 0.2
CCNE1-204ENST00000574121 CHSY1Q86X52 802 aa16.27■□□□□ 0.2
CCNE1-204ENST00000574121 PSTKQ8IV42 348 aaKnown RBP16.27■□□□□ 0.2
CCNE1-204ENST00000574121 SUGP1Q8IWZ8 645 aaKnown RBP16.27■□□□□ 0.2
CCNE1-204ENST00000574121 SIX5Q8N196 739 aa16.27■□□□□ 0.2
CCNE1-204ENST00000574121 HJURPQ8NCD3 748 aaPredicted RBP16.27■□□□□ 0.2
CCNE1-204ENST00000574121 TMA16Q96EY4 203 aaKnown RBP16.27■□□□□ 0.2
CCNE1-204ENST00000574121 PRMT1Q99873 361 aaKnown RBP16.27■□□□□ 0.2
CCNE1-204ENST00000574121 OSBPL2Q9H1P3 480 aa16.27■□□□□ 0.2
CCNE1-204ENST00000574121 OSGEPQ9NPF4 335 aa16.27■□□□□ 0.2
CCNE1-204ENST00000574121 XPO7Q9UIA9 1087 aaKnown RBP16.27■□□□□ 0.2
CCNE1-204ENST00000574121 CA14Q9ULX7 337 aa16.27■□□□□ 0.2
CCNE1-204ENST00000574121 HS3ST4Q9Y661 456 aa16.27■□□□□ 0.2
CCNE1-204ENST00000574121 TTC28Q96AY4 2481 aa16.27■□□□□ 0.19
CCNE1-204ENST00000574121 COL4A2P08572 1712 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 KRBA1A5PL33 1030 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 NEDD8-MDP1E9PL57 170 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 I6L893 689 aaPredicted RBP16.26■□□□□ 0.19
CCNE1-204ENST00000574121 TRDMT1O14717 391 aaKnown RBP16.26■□□□□ 0.19
CCNE1-204ENST00000574121 PJA2O43164 708 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 LRCH4O75427 683 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 PROSCO94903 275 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 PTMAP06454 111 aaKnown RBP16.26■□□□□ 0.19
CCNE1-204ENST00000574121 TYRP14679 529 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 SLC6A4P31645 630 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 VCPP55072 806 aaKnown RBP16.26■□□□□ 0.19
CCNE1-204ENST00000574121 CCZ1BP86790 482 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 CCZ1P86791 482 aaPredicted RBP16.26■□□□□ 0.19
CCNE1-204ENST00000574121 NRG1Q02297 640 aaPredicted RBP16.26■□□□□ 0.19
CCNE1-204ENST00000574121 CCDC173Q0VFZ6 552 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 AUHQ13825 339 aaKnown RBP16.26■□□□□ 0.19
CCNE1-204ENST00000574121 GAB4Q2WGN9 574 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 RABGAP1LQ5R372 815 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 FYB2Q5VWT5 728 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 SCYL2Q6P3W7 929 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 SLFN11Q7Z7L1 901 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 KIAA1328Q86T90 577 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 ETFBKMTQ8IXQ9 262 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 ACRBPQ8NEB7 543 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 DDI1Q8WTU0 396 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 XPO6Q96QU8 1125 aaKnown RBP16.26■□□□□ 0.19
CCNE1-204ENST00000574121 NELL2Q99435 816 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 SLC2A11Q9BYW1 496 aa16.26■□□□□ 0.19
CCNE1-204ENST00000574121 GOLGA6L7A0A1B0GV03 622 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 PRPSAP2O60256 369 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 MIPP30301 263 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 SOX9P48436 509 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 KIF5AQ12840 1032 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 C5orf22Q49AR2 442 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 RAB6CQ53S08 254 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 EFHC2Q5JST6 749 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 RAP1GAP2Q684P5 730 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 RFWD3Q6PCD5 774 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 LRRC31Q6UY01 552 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 LGI2Q8N0V4 545 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 ARFGAP1Q8N6T3 406 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 TTC8Q8TAM2 541 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 FAM3CQ92520 227 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 CHFRQ96EP1 664 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 PRICKLE1Q96MT3 831 aaPredicted RBP16.25■□□□□ 0.19
CCNE1-204ENST00000574121 P2RY13Q9BPV8 354 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 OSBPL6Q9BZF3 934 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 RAB6CQ9H0N0 254 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 RETREG1Q9H6L5 497 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 ANLNQ9NQW6 1124 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 FZD10Q9ULW2 581 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 USP18Q9UMW8 372 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 ADGRG1Q9Y653 693 aa16.25■□□□□ 0.19
CCNE1-204ENST00000574121 IGLV3-10A0A075B6K4 115 aa16.24■□□□□ 0.19
CCNE1-204ENST00000574121 KANSL1LA0AUZ9 987 aa16.24■□□□□ 0.19
CCNE1-204ENST00000574121 HOXD9P28356 352 aaPredicted RBP16.24■□□□□ 0.19
CCNE1-204ENST00000574121 HTR7P34969 479 aa16.24■□□□□ 0.19
CCNE1-204ENST00000574121 OPRD1P41143 372 aa16.24■□□□□ 0.19
CCNE1-204ENST00000574121 SLC1A1P43005 524 aa16.24■□□□□ 0.19
CCNE1-204ENST00000574121 ZNF135P52742 658 aaPredicted RBP16.24■□□□□ 0.19
CCNE1-204ENST00000574121 HADHQ16836 314 aaKnown RBP16.24■□□□□ 0.19
CCNE1-204ENST00000574121 BOLA3Q53S33 107 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms