RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 ARID5BQ14865 1188 aa15.76■□□□□ 0.11
RAB40B-203ENST00000570676 STILQ15468 1287 aa15.76■□□□□ 0.11
RAB40B-203ENST00000570676 TRIP4Q15650 581 aaPredicted RBP15.76■□□□□ 0.11
RAB40B-203ENST00000570676 CNGA2Q16280 664 aa15.76■□□□□ 0.11
RAB40B-203ENST00000570676 ASIC2Q16515 512 aa15.76■□□□□ 0.11
RAB40B-203ENST00000570676 AASDHQ4L235 1098 aaPredicted RBP15.76■□□□□ 0.11
RAB40B-203ENST00000570676 BSPRYQ5W0U4 402 aa15.76■□□□□ 0.11
RAB40B-203ENST00000570676 TCEAL6Q6IPX3 200 aa15.76■□□□□ 0.11
RAB40B-203ENST00000570676 DENND1CQ8IV53 801 aa15.76■□□□□ 0.11
RAB40B-203ENST00000570676 FMNL3Q8IVF7 1028 aa15.76■□□□□ 0.11
RAB40B-203ENST00000570676 FAM71AQ8IYT1 594 aa15.76■□□□□ 0.11
RAB40B-203ENST00000570676 FRMD1Q8N878 549 aa15.76■□□□□ 0.11
RAB40B-203ENST00000570676 RLN3Q8WXF3 142 aa15.76■□□□□ 0.11
RAB40B-203ENST00000570676 EDEM1Q92611 657 aa15.76■□□□□ 0.11
RAB40B-203ENST00000570676 TCEAL3Q969E4 200 aa15.76■□□□□ 0.11
RAB40B-203ENST00000570676 GABRG3Q99928 467 aa15.76■□□□□ 0.11
RAB40B-203ENST00000570676 VPS45Q9NRW7 570 aa15.76■□□□□ 0.11
RAB40B-203ENST00000570676 SLC27A6Q9Y2P4 619 aa15.76■□□□□ 0.11
RAB40B-203ENST00000570676 GFRA2O00451 464 aa15.75■□□□□ 0.11
RAB40B-203ENST00000570676 MSI1O43347 362 aaKnown RBP15.75■□□□□ 0.11
RAB40B-203ENST00000570676 LCP1P13796 627 aa15.75■□□□□ 0.11
RAB40B-203ENST00000570676 FERP16591 822 aa15.75■□□□□ 0.11
RAB40B-203ENST00000570676 CHKAP35790 457 aa15.75■□□□□ 0.11
RAB40B-203ENST00000570676 LIMK1P53667 647 aa15.75■□□□□ 0.11
RAB40B-203ENST00000570676 CREB5Q02930 508 aa15.75■□□□□ 0.11
RAB40B-203ENST00000570676 MAP7D1Q3KQU3 841 aa15.75■□□□□ 0.11
RAB40B-203ENST00000570676 E4F1Q66K89 784 aaPredicted RBP15.75■□□□□ 0.11
RAB40B-203ENST00000570676 SMYD5Q6GMV2 418 aa15.75■□□□□ 0.11
RAB40B-203ENST00000570676 KIAA1211LQ6NV74 962 aa15.75■□□□□ 0.11
RAB40B-203ENST00000570676 MSANTD2Q6P1R3 559 aa15.75■□□□□ 0.11
RAB40B-203ENST00000570676 NUDT18Q6ZVK8 323 aa15.75■□□□□ 0.11
RAB40B-203ENST00000570676 C12orf50Q8NA57 414 aaPredicted RBP15.75■□□□□ 0.11
RAB40B-203ENST00000570676 CLEC4CQ8WTT0 213 aa15.75■□□□□ 0.11
RAB40B-203ENST00000570676 SYN2Q92777 582 aaPredicted RBP15.75■□□□□ 0.11
RAB40B-203ENST00000570676 PANX2Q96RD6 677 aa15.75■□□□□ 0.11
RAB40B-203ENST00000570676 ZNHIT6Q9NWK9 470 aaKnown RBP15.75■□□□□ 0.11
RAB40B-203ENST00000570676 AIPL1Q9NZN9 384 aa15.75■□□□□ 0.11
RAB40B-203ENST00000570676 BCCIPQ9P287 314 aaKnown RBP eCLIP15.75■□□□□ 0.11
RAB40B-203ENST00000570676 SFMBT1Q9UHJ3 866 aa15.75■□□□□ 0.11
RAB40B-203ENST00000570676 MBD1Q9UIS9 605 aaPredicted RBP15.75■□□□□ 0.11
RAB40B-203ENST00000570676 STOML2Q9UJZ1 356 aa15.75■□□□□ 0.11
RAB40B-203ENST00000570676 CLEC4EQ9ULY5 219 aa15.75■□□□□ 0.11
RAB40B-203ENST00000570676 HBS1LQ9Y450 684 aaKnown RBP15.75■□□□□ 0.11
RAB40B-203ENST00000570676 NYNRINQ9P2P1 1898 aaKnown RBP15.74■□□□□ 0.11
RAB40B-203ENST00000570676 PIK3R2O00459 728 aa15.74■□□□□ 0.11
RAB40B-203ENST00000570676 CCDC172P0C7W6 258 aa15.74■□□□□ 0.11
RAB40B-203ENST00000570676 HNRNPH3P31942 346 aaKnown RBP15.74■□□□□ 0.11
RAB40B-203ENST00000570676 RPL34P49207 117 aaKnown RBP15.74■□□□□ 0.11
RAB40B-203ENST00000570676 GEN1Q17RS7 908 aa15.74■□□□□ 0.11
RAB40B-203ENST00000570676 CHPFQ8IZ52 775 aa15.74■□□□□ 0.11
RAB40B-203ENST00000570676 IRGQQ8WZA9 623 aa15.74■□□□□ 0.11
RAB40B-203ENST00000570676 PIWIL1Q96J94 861 aaKnown RBP15.74■□□□□ 0.11
RAB40B-203ENST00000570676 SPACA7Q96KW9 195 aa15.74■□□□□ 0.11
RAB40B-203ENST00000570676 ABCC13Q9NSE7 274 aa15.74■□□□□ 0.11
RAB40B-203ENST00000570676 CACNA2D2Q9NY47 1150 aa15.74■□□□□ 0.11
RAB40B-203ENST00000570676 CALCOCO1Q9P1Z2 691 aa15.74■□□□□ 0.11
RAB40B-203ENST00000570676 RAD54BQ9Y620 910 aa15.74■□□□□ 0.11
RAB40B-203ENST00000570676 IGLV3-27P01718 113 aa15.73■□□□□ 0.11
RAB40B-203ENST00000570676 LTFP02788 710 aa15.73■□□□□ 0.11
RAB40B-203ENST00000570676 NDUFV2P19404 249 aa15.73■□□□□ 0.11
RAB40B-203ENST00000570676 HOXD9P28356 352 aaPredicted RBP15.73■□□□□ 0.11
RAB40B-203ENST00000570676 CLCN1P35523 988 aa15.73■□□□□ 0.11
RAB40B-203ENST00000570676 BPIFB4P59827 614 aa15.73■□□□□ 0.11
RAB40B-203ENST00000570676 PTK2Q05397 1052 aa15.73■□□□□ 0.11
RAB40B-203ENST00000570676 MEA1Q16626 185 aa15.73■□□□□ 0.11
RAB40B-203ENST00000570676 CYP2U1Q7Z449 544 aa15.73■□□□□ 0.11
RAB40B-203ENST00000570676 IRF2BP2Q7Z5L9 587 aa15.73■□□□□ 0.11
RAB40B-203ENST00000570676 IPO4Q8TEX9 1081 aaKnown RBP15.73■□□□□ 0.11
RAB40B-203ENST00000570676 RNF139Q8WU17 664 aa15.73■□□□□ 0.11
RAB40B-203ENST00000570676 HSFY1Q96LI6 401 aa15.73■□□□□ 0.11
RAB40B-203ENST00000570676 PCDH15Q96QU1 1955 aa15.73■□□□□ 0.11
RAB40B-203ENST00000570676 LATS1O95835 1130 aa15.72■□□□□ 0.11
RAB40B-203ENST00000570676 CYBBP04839 570 aa15.72■□□□□ 0.11
RAB40B-203ENST00000570676 SERPING1P05155 500 aa15.72■□□□□ 0.11
RAB40B-203ENST00000570676 SKILP12757 684 aa15.72■□□□□ 0.11
RAB40B-203ENST00000570676 GPD2P43304 727 aa15.72■□□□□ 0.11
RAB40B-203ENST00000570676 KLHL30Q0D2K2 578 aa15.72■□□□□ 0.11
RAB40B-203ENST00000570676 ENPP2Q13822 863 aa15.72■□□□□ 0.11
RAB40B-203ENST00000570676 TDRD12Q587J7 1177 aaKnown RBP15.72■□□□□ 0.11
RAB40B-203ENST00000570676 WDR59Q6PJI9 974 aa15.72■□□□□ 0.11
RAB40B-203ENST00000570676 ANKS1BQ7Z6G8 1248 aa15.72■□□□□ 0.11
RAB40B-203ENST00000570676 SLC47A2Q86VL8 602 aa15.72■□□□□ 0.11
RAB40B-203ENST00000570676 PGBD3Q8N328 593 aa15.72■□□□□ 0.11
RAB40B-203ENST00000570676 ERLEC1Q96DZ1 483 aa15.72■□□□□ 0.11
RAB40B-203ENST00000570676 ACP6Q9NPH0 428 aa15.72■□□□□ 0.11
RAB40B-203ENST00000570676 THAP10Q9P2Z0 257 aaPredicted RBP15.72■□□□□ 0.11
RAB40B-203ENST00000570676 NCOR2Q9Y618 2525 aa15.71■□□□□ 0.11
RAB40B-203ENST00000570676 LNP1A1A4G5 178 aa15.71■□□□□ 0.11
RAB40B-203ENST00000570676 PATE3B3GLJ2 98 aa15.71■□□□□ 0.11
RAB40B-203ENST00000570676 WASH3PC4AMC7 463 aa15.71■□□□□ 0.11
RAB40B-203ENST00000570676 TM4SF5O14894 197 aa15.71■□□□□ 0.11
RAB40B-203ENST00000570676 FBXO21O94952 628 aa15.71■□□□□ 0.11
RAB40B-203ENST00000570676 FYNP06241 537 aa15.71■□□□□ 0.11
RAB40B-203ENST00000570676 CYP11B1P15538 503 aa15.71■□□□□ 0.11
RAB40B-203ENST00000570676 GNA15P30679 374 aa15.71■□□□□ 0.11
RAB40B-203ENST00000570676 PRKCIP41743 596 aa15.71■□□□□ 0.11
RAB40B-203ENST00000570676 IL12RB1P42701 662 aa15.71■□□□□ 0.11
RAB40B-203ENST00000570676 PTGER3P43115 390 aa15.71■□□□□ 0.11
RAB40B-203ENST00000570676 DHPSP49366 369 aaPredicted RBP15.71■□□□□ 0.11
RAB40B-203ENST00000570676 HARS2P49590 506 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms