RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 C3orf38Q5JPI3 329 aa7.55□□□□□ -1.2
SMG6-205ENST00000570659 SPOPLQ6IQ16 392 aa7.55□□□□□ -1.2
SMG6-205ENST00000570659 CRTC1Q6UUV9 634 aa7.55□□□□□ -1.2
SMG6-205ENST00000570659 MMS22LQ6ZRQ5 1243 aa7.55□□□□□ -1.2
SMG6-205ENST00000570659 CLEC20AQ6ZU45 233 aa7.55□□□□□ -1.2
SMG6-205ENST00000570659 CHST9Q7L1S5 443 aa7.55□□□□□ -1.2
SMG6-205ENST00000570659 TMC6Q7Z403 805 aa7.55□□□□□ -1.2
SMG6-205ENST00000570659 ADAT2Q7Z6V5 191 aaKnown RBP7.55□□□□□ -1.2
SMG6-205ENST00000570659 KIAA0907Q7Z7F0 614 aaPredicted RBP7.55□□□□□ -1.2
SMG6-205ENST00000570659 GPD1LQ8N335 351 aa7.55□□□□□ -1.2
SMG6-205ENST00000570659 RDH13Q8NBN7 331 aa7.55□□□□□ -1.2
SMG6-205ENST00000570659 CACTINQ8WUQ7 758 aaKnown RBP7.55□□□□□ -1.2
SMG6-205ENST00000570659 HTR3CQ8WXA8 447 aa7.55□□□□□ -1.2
SMG6-205ENST00000570659 LARP4BQ92615 738 aaKnown RBP7.55□□□□□ -1.2
SMG6-205ENST00000570659 MRGPRX3Q96LB0 322 aa7.55□□□□□ -1.2
SMG6-205ENST00000570659 NOX5Q96PH1 765 aa7.55□□□□□ -1.2
SMG6-205ENST00000570659 PSMG3-AS1Q96PY0 264 aa7.55□□□□□ -1.2
SMG6-205ENST00000570659 MED10Q9BTT4 135 aa7.55□□□□□ -1.2
SMG6-205ENST00000570659 ACE2Q9BYF1 805 aaPredicted RBP7.55□□□□□ -1.2
SMG6-205ENST00000570659 RAB34Q9BZG1 259 aa7.55□□□□□ -1.2
SMG6-205ENST00000570659 NACA2Q9H009 215 aa7.55□□□□□ -1.2
SMG6-205ENST00000570659 PABPC3Q9H361 631 aaKnown RBP7.55□□□□□ -1.2
SMG6-205ENST00000570659 CSNK1G1Q9HCP0 422 aa7.55□□□□□ -1.2
SMG6-205ENST00000570659 AASDHPPTQ9NRN7 309 aa7.55□□□□□ -1.2
SMG6-205ENST00000570659 ABCB8Q9NUT2 735 aa7.55□□□□□ -1.2
SMG6-205ENST00000570659 MAN2B2Q9Y2E5 1009 aa7.55□□□□□ -1.2
SMG6-205ENST00000570659 LRBAP50851 2863 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 SCN8AQ9UQD0 1980 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 GOLGA6L7A0A1B0GV03 622 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 CDRT15L2A8MXV6 281 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 TLR4O00206 839 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 LAD1O00515 517 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 TGFB1I1O43294 461 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 EPB41L2O43491 1005 aaKnown RBP7.54□□□□□ -1.2
SMG6-205ENST00000570659 NEBLO76041 1014 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 GCNT3O95395 438 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 DLATP10515 647 aaKnown RBP7.54□□□□□ -1.2
SMG6-205ENST00000570659 GP1BBP13224 206 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 PRKCSHP14314 528 aaPredicted RBP7.54□□□□□ -1.2
SMG6-205ENST00000570659 GARTP22102 1010 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 CD38P28907 300 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 MAT2AP31153 395 aaKnown RBP7.54□□□□□ -1.2
SMG6-205ENST00000570659 ATP5C1P36542 298 aaKnown RBP7.54□□□□□ -1.2
SMG6-205ENST00000570659 RXRGP48443 463 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 LSSP48449 732 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 BCAT1P54687 386 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 C21orf59P57076 290 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 EFEMP1Q12805 493 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 UBAP2LQ14157 1087 aaKnown RBP7.54□□□□□ -1.2
SMG6-205ENST00000570659 ARL13BQ3SXY8 428 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 FNDC3BQ53EP0 1204 aaKnown RBP7.54□□□□□ -1.2
SMG6-205ENST00000570659 ZNF542PQ5EBM4 170 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 C10orf120Q5SQS8 335 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 TPRG1LQ5T0D9 272 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 FAM217AQ8IXS0 508 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 CACTIN-AS1Q8N1I8 211 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 CCDC127Q96BQ5 260 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 ANKRD36BP1Q96IX9 119 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 CDK5RAP3Q96JB5 506 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 ZNF578Q96N58 590 aaPredicted RBP7.54□□□□□ -1.2
SMG6-205ENST00000570659 ACCSQ96QU6 501 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 FAM129BQ96TA1 746 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 MYOCQ99972 504 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 RSPH9Q9H1X1 276 aaPredicted RBP7.54□□□□□ -1.2
SMG6-205ENST00000570659 MRPL44Q9H9J2 332 aaKnown RBP7.54□□□□□ -1.2
SMG6-205ENST00000570659 POLR1BQ9H9Y6 1135 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 FBXL12Q9NXK8 326 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 ADAMTS1Q9UHI8 967 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 RASAL2Q9UJF2 1139 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 SCML2Q9UQR0 700 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 KIF3AQ9Y496 699 aa7.54□□□□□ -1.2
SMG6-205ENST00000570659 FRMD3A2A2Y4 597 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 TTC34A8MYJ7 566 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 TULP2O00295 520 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 CLIC2O15247 247 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 RTN2O75298 545 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 POU3F2P20265 443 aaPredicted RBP7.53□□□□□ -1.2
SMG6-205ENST00000570659 SLC6A4P31645 630 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 DRD3P35462 400 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 NDST1P52848 882 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 ADPRHP54922 357 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 DLG4P78352 724 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 GNL2Q13823 731 aaKnown RBP7.53□□□□□ -1.2
SMG6-205ENST00000570659 POSTNQ15063 836 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 ANKRD1Q15327 319 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 SKIDA1Q1XH10 827 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 ISXQ2M1V0 245 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 ZSCAN23Q3MJ62 389 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 PERM1Q5SV97 790 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 C9orf64Q5T6V5 341 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 MBLAC2Q68D91 279 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 RFWD3Q6PCD5 774 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 NYAP1Q6ZVC0 841 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 NUDT18Q6ZVK8 323 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 PTRH1Q86Y79 214 aaKnown RBP7.53□□□□□ -1.2
SMG6-205ENST00000570659 WDR49Q8IV35 697 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 MMAAQ8IVH4 418 aaKnown RBP7.53□□□□□ -1.2
SMG6-205ENST00000570659 HVCN1Q96D96 273 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 SMARCD1Q96GM5 515 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 SERAC1Q96JX3 654 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms