RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 CDCP2Q5VXM1 449 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 USP30Q70CQ3 517 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 SCD5Q86SK9 330 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 SPATS2Q86XZ4 545 aaKnown RBP10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 DENND1CQ8IV53 801 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 ZC3H3Q8IXZ2 948 aaKnown RBP10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 CPXM2Q8N436 756 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 ZNF276Q8N554 614 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 EXD3Q8N9H8 876 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 JAKMIP2Q96AA8 810 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 ELMO3Q96BJ8 720 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 CCDC127Q96BQ5 260 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 EPSTI1Q96J88 318 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 VCPIP1Q96JH7 1222 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 CGRRF1Q99675 332 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 DCLK3Q9C098 648 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 PABPC3Q9H361 631 aaKnown RBP10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 MTG2Q9H4K7 406 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 ERVMER34-1Q9H9K5 563 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 FBXL12Q9NXK8 326 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 NAGPAQ9UK23 515 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 PLA2G4CQ9UP65 541 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 NCKAP1Q9Y2A7 1128 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 HEMK1Q9Y5R4 338 aaPredicted RBP10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 RELNP78509 3460 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 FRMD3A2A2Y4 597 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 TRIM38O00635 465 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 SIGLEC6O43699 453 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 USP12O75317 370 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 IDEP14735 1019 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 HOXD9P28356 352 aaPredicted RBP10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 ATICP31939 592 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 HOXD13P35453 343 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 COG7P83436 770 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 NFKB2Q00653 900 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 TRPC3Q13507 836 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 PSMD6Q15008 389 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 SNRNP35Q16560 246 aaKnown RBP10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 ZNF776Q68DI1 518 aaPredicted RBP10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 CLEC20AQ6ZU45 233 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 CHST9Q7L1S5 443 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 ADIPOR2Q86V24 386 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 FAM217AQ8IXS0 508 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 C12orf29Q8N999 325 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 GANCQ8TET4 914 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 GOLGA1Q92805 767 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 SYAP1Q96A49 352 aaPredicted RBP10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 ZSCAN31Q96LW9 406 aaPredicted RBP10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 GZF1Q9H116 711 aaPredicted RBP10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 RSPH9Q9H1X1 276 aaPredicted RBP10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 NEUROG2Q9H2A3 272 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 VRTNQ9H8Y1 702 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 POLR1BQ9H9Y6 1135 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 KIAA1586Q9HCI6 787 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 FAM49BQ9NUQ9 324 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 ANKMY1Q9P2S6 941 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 STK17AQ9UEE5 414 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 HMGXB4Q9UGU5 601 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 RASAL2Q9UJF2 1139 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 PCDHA5Q9Y5H7 936 aa10.92□□□□□ -0.66
CTDNEP1-202ENST00000570380 A0A1W2PP55 124 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 SDC3O75056 442 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 RALAP11233 206 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 ADORA2BP29275 332 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 CCR5P51681 352 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 KIF11P52732 1056 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 SKOR1P84550 965 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 CYP24A1Q07973 514 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 PDE4CQ08493 712 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 EFEMP1Q12805 493 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 ZNF211Q13398 564 aaPredicted RBP10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 BMT2Q1RMZ1 405 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 C6orf132Q5T0Z8 1188 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 SCARA5Q6ZMJ2 495 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 ZNF574Q6ZN55 896 aaPredicted RBP10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 SV2BQ7L1I2 683 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 KIAA0907Q7Z7F0 614 aaPredicted RBP10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 TADA2BQ86TJ2 420 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 CRYBG2Q8N1P7 616 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 SLC25A45Q8N413 288 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 OXR1Q8N573 874 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 OR2T34Q8NGX1 318 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 WFIKKN2Q8TEU8 576 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 SERAC1Q96JX3 654 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 THSD1Q9NS62 852 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 ABCB8Q9NUT2 735 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 PANK4Q9NVE7 773 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 SUN2Q9UH99 717 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 SCML1Q9UN30 329 aa10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 TLN1Q9Y490 2541 aaKnown RBP10.91□□□□□ -0.66
CTDNEP1-202ENST00000570380 A0A1W2PNU3 283 aaPredicted RBP10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 LRRC72A6NJI9 287 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 MID1O15344 667 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 OPA1O60313 960 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 CSO75390 466 aaKnown RBP10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 DLDP09622 509 aaKnown RBP10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 FAM200BP0CF97 657 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 PSEN1P49768 467 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 NDST1P52848 882 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 DAB2P98082 770 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms