RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 SMG9Q9H0W8 520 aaKnown RBP15.96■□□□□ 0.15
HERPUD1-219ENST00000570273 OSBPL2Q9H1P3 480 aa15.96■□□□□ 0.15
HERPUD1-219ENST00000570273 ADAM7Q9H2U9 754 aa15.96■□□□□ 0.15
HERPUD1-219ENST00000570273 XPO7Q9UIA9 1087 aaKnown RBP15.96■□□□□ 0.15
HERPUD1-219ENST00000570273 ARHGAP26Q9UNA1 814 aa15.96■□□□□ 0.15
HERPUD1-219ENST00000570273 ANAPC1Q9H1A4 1944 aa15.95■□□□□ 0.14
HERPUD1-219ENST00000570273 EEF2KO00418 725 aaKnown RBP15.95■□□□□ 0.14
HERPUD1-219ENST00000570273 CREB3O43889 395 aa15.95■□□□□ 0.14
HERPUD1-219ENST00000570273 KRT10P13645 584 aa15.95■□□□□ 0.14
HERPUD1-219ENST00000570273 TPI1P60174 286 aa15.95■□□□□ 0.14
HERPUD1-219ENST00000570273 DLX2Q07687 328 aaPredicted RBP15.95■□□□□ 0.14
HERPUD1-219ENST00000570273 CLUL1Q15846 466 aa15.95■□□□□ 0.14
HERPUD1-219ENST00000570273 PIK3R6Q5UE93 754 aa15.95■□□□□ 0.14
HERPUD1-219ENST00000570273 CHSY1Q86X52 802 aa15.95■□□□□ 0.14
HERPUD1-219ENST00000570273 SLC13A5Q86YT5 568 aaPredicted RBP15.95■□□□□ 0.14
HERPUD1-219ENST00000570273 ACTRT1Q8TDG2 376 aa15.95■□□□□ 0.14
HERPUD1-219ENST00000570273 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.95■□□□□ 0.14
HERPUD1-219ENST00000570273 TSC1Q92574 1164 aa15.95■□□□□ 0.14
HERPUD1-219ENST00000570273 CFAP97Q9P2B7 532 aa15.95■□□□□ 0.14
HERPUD1-219ENST00000570273 RCOR3Q9P2K3 495 aaPredicted RBP15.95■□□□□ 0.14
HERPUD1-219ENST00000570273 RNF14Q9UBS8 474 aa15.95■□□□□ 0.14
HERPUD1-219ENST00000570273 LSM7Q9UK45 103 aaKnown RBP15.95■□□□□ 0.14
HERPUD1-219ENST00000570273 TTC7AQ9ULT0 858 aaPredicted RBP15.95■□□□□ 0.14
HERPUD1-219ENST00000570273 HS3ST4Q9Y661 456 aa15.95■□□□□ 0.14
HERPUD1-219ENST00000570273 FAM72CH0Y354 149 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 PDE2AO00408 941 aaPredicted RBP15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 GOT1P17174 413 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 SLC11A2P49281 568 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 ZNF135P52742 658 aaPredicted RBP15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 SEMA3BQ13214 749 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 COL19A1Q14993 1142 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 TAZQ16635 292 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 MS4A13Q5J8X5 152 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 ATAT1Q5SQI0 421 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 FAM72AQ5TYM5 149 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 RAP1GAP2Q684P5 730 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 FAM72DQ6L9T8 149 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 ADAT2Q7Z6V5 191 aaKnown RBP15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 FAM72BQ86X60 149 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 VSIG1Q86XK7 387 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 DDX42Q86XP3 938 aaKnown RBP eCLIP15.94■□□□□ 0.142e-8■■■■■ 39.1
HERPUD1-219ENST00000570273 DENND1CQ8IV53 801 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 WBP2Q969T9 261 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 RIPOR3Q96MK2 946 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 CSPG4P5Q96PW8 444 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 HERPUD2Q9BSE4 406 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 MAK16Q9BXY0 300 aaKnown RBP15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 DCLK3Q9C098 648 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 S1PR5Q9H228 398 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 L2HGDHQ9H9P8 463 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 CWC15Q9P013 229 aaKnown RBP15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 OR12D3Q9UGF7 316 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 SH3BP1Q9Y3L3 701 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 ZNF487B1APH4 448 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 LEFTY2O00292 366 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 DAPK3O43293 454 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 ACSL4O60488 711 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 PRAMEF12O95522 483 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 DYNLT1P63172 113 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 TFDP2Q14188 446 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 CBX2Q14781 532 aaPredicted RBP15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 ANKRD20A8PQ5CZ79 823 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 RFX8Q6ZV50 586 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 NPAS3Q8IXF0 933 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 ADAMTS19Q8TE59 1207 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 SH3RF2Q8TEC5 729 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 MAIP1Q8WWC4 291 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 USP13Q92995 863 aaPredicted RBP15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 FAF2Q96CS3 445 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 TBC1D31Q96DN5 1066 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 MSLNLQ96KJ4 702 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 ZSWIM3Q96MP5 696 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 RNF157Q96PX1 679 aa15.94■□□□□ 0.14
HERPUD1-219ENST00000570273 TCRBV7S2A1N4TA0A589 114 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 E9PAM4 449 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 SCAMP3O14828 347 aaKnown RBP15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 LRIG2O94898 1065 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 TJP3O95049 919 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 LATS1O95835 1130 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 KLKB1P03952 638 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 FOSL2P15408 326 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 TACR2P21452 398 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 IL4RP24394 825 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 HTR7P34969 479 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 LTBRP36941 435 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 MTHFRP42898 656 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 MLLT6P55198 1093 aaPredicted RBP15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 ZXDBP98169 803 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 NRG1Q02297 640 aaPredicted RBP15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 AUHQ13825 339 aaKnown RBP15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 ACBD5Q5T8D3 534 aaPredicted RBP15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 NADSYN1Q6IA69 706 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 RWDD4Q6NW29 188 aaKnown RBP15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 LRRC31Q6UY01 552 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 C14orf80Q86SX3 495 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 CEP112Q8N8E3 955 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 MNS1Q8NEH6 495 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 PCDH19Q8TAB3 1148 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 ZSCAN18Q8TBC5 510 aaPredicted RBP15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 AZIN2Q96A70 460 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms