RNA–Protein interactions for RNA: ENST00000569745.5

CCNDBP1-215, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 5

Gene CCNDBP1, Length 1,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-215ENST00000569745 ZNF557Q8N988 423 aaPredicted RBP17.02■□□□□ 0.31
CCNDBP1-215ENST00000569745 WFIKKN2Q8TEU8 576 aa17.02■□□□□ 0.31
CCNDBP1-215ENST00000569745 GANQ9H2C0 597 aa17.02■□□□□ 0.31
CCNDBP1-215ENST00000569745 DLL3Q9NYJ7 618 aa17.02■□□□□ 0.31
CCNDBP1-215ENST00000569745 SLC12A6Q9UHW9 1150 aa17.02■□□□□ 0.31
CCNDBP1-215ENST00000569745 RAD54BQ9Y620 910 aa17.02■□□□□ 0.31
CCNDBP1-215ENST00000569745 TYW5A2RUC4 315 aaKnown RBP17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 GRAP2O75791 330 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 MOCS2O96007 188 aaPredicted RBP17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 CDH5P33151 784 aaPredicted RBP17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 MPLP40238 635 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 IL12RB1P42701 662 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 KLK7P49862 253 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 POLR2FP61218 127 aaKnown RBP17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 PITX1P78337 314 aaPredicted RBP17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 CREB5Q02930 508 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 TYRO3Q06418 890 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 ZNF234Q14588 700 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 STARD3Q14849 445 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 CCDC6Q16204 474 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 ZC3H12AQ5D1E8 599 aaKnown RBP17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 MS4A13Q5J8X5 152 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 TAF3Q5VWG9 929 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 RNF43Q68DV7 783 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 OLFML1Q6UWY5 402 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 LPCAT2Q7L5N7 544 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 SLC26A9Q7LBE3 791 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 NOP9Q86U38 636 aaKnown RBP17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 FRMD1Q8N878 549 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 ZNF397Q8NF99 534 aaPredicted RBP17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 DDX1Q92499 740 aaKnown RBP17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 BTN2A3PQ96KV6 586 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 NAT10Q9H0A0 1025 aaKnown RBP17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 FAM207AQ9NSI2 230 aaPredicted RBP17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 ABCB8Q9NUT2 735 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 STIM2Q9P246 746 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 GGA2Q9UJY4 613 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 PLA2G4CQ9UP65 541 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 DAAM1Q9Y4D1 1078 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 KIAA1549LQ6ZVL6 1849 aa17.01■□□□□ 0.31
CCNDBP1-215ENST00000569745 BCLAF3A2AJT9 711 aaKnown RBP17■□□□□ 0.31
CCNDBP1-215ENST00000569745 SYNCRIPO60506 623 aaKnown RBP17■□□□□ 0.31
CCNDBP1-215ENST00000569745 ZNF217O75362 1048 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 SLC2A3P11169 496 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 ZNF18P17022 549 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 NDUFV2P19404 249 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 NCAPHQ15003 741 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 SPDYCQ5MJ68 293 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 CHST9Q7L1S5 443 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 ADIPOR2Q86V24 386 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 ERICH1Q86X53 443 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 MFN1Q8IWA4 741 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 CCDC117Q8IWD4 279 aaPredicted RBP17■□□□□ 0.31
CCNDBP1-215ENST00000569745 AHI1Q8N157 1196 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 ATP6V0D2Q8N8Y2 350 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 C12orf50Q8NA57 414 aaPredicted RBP17■□□□□ 0.31
CCNDBP1-215ENST00000569745 HJURPQ8NCD3 748 aaPredicted RBP17■□□□□ 0.31
CCNDBP1-215ENST00000569745 FIBINQ8TAL6 211 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 SORCS1Q8WY21 1168 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 C18orf8Q96DM3 657 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 ERLEC1Q96DZ1 483 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 MRGPRX1Q96LB2 322 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 NUCKS1Q9H1E3 243 aaKnown RBP17■□□□□ 0.31
CCNDBP1-215ENST00000569745 VPS45Q9NRW7 570 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 DDIT4Q9NX09 232 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 CALCOCO1Q9P1Z2 691 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 XPO7Q9UIA9 1087 aaKnown RBP17■□□□□ 0.31
CCNDBP1-215ENST00000569745 MBD1Q9UIS9 605 aaPredicted RBP17■□□□□ 0.31
CCNDBP1-215ENST00000569745 SIK3Q9Y2K2 1263 aa17■□□□□ 0.31
CCNDBP1-215ENST00000569745 VPS13AQ96RL7 3174 aa16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 CFAP54Q96N23 3096 aa16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 KCNU1A8MYU2 1149 aa16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 GFPT2O94808 682 aa16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 LSM8O95777 96 aaKnown RBP16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 CAVIN2O95810 425 aa16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 PABPC1P11940 636 aaKnown RBP16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 ABCB4P21439 1286 aa16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 CCR1P32246 355 aa16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 NOS2P35228 1153 aa16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 GABRB2P47870 512 aa16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 RPS24P62847 133 aaKnown RBP16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 SF3A2Q15428 464 aaKnown RBP16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 SYCP1Q15431 976 aa16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 SLC36A4Q6YBV0 504 aa16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 ERMP1Q7Z2K6 904 aa16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 ZNF677Q86XU0 584 aa16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 EPS8L1Q8TE68 723 aa16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 RNF34Q969K3 372 aa16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 PCMTD1Q96MG8 357 aaPredicted RBP16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 PRICKLE1Q96MT3 831 aaPredicted RBP16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 SPAG5Q96R06 1193 aa16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 FAM204AQ9H8W3 233 aa16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 NLRC4Q9NPP4 1024 aa16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 CDV3Q9UKY7 258 aaKnown RBP16.99■□□□□ 0.31
CCNDBP1-215ENST00000569745 GPR179Q6PRD1 2367 aa16.98■□□□□ 0.31
CCNDBP1-215ENST00000569745 SYNJ2BP-COX16A0A087WUM0 186 aa16.98■□□□□ 0.31
CCNDBP1-215ENST00000569745 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.98■□□□□ 0.31
CCNDBP1-215ENST00000569745 LGALS16A8MUM7 142 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms