RNA–Protein interactions for RNA: ENST00000569340.1

BCAR1-222, Transcript of BCAR1, Cas family scaffold protein, human

TSL 3

Gene BCAR1, Length 714 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BCAR1-222	ENST00000569340	HOXD9	P28356	352 aa	Predicted RBP	13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	SLC6A4	P31645	630 aa		13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	CDR2	Q01850	454 aa		13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	NME3	Q13232	169 aa		13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	GEN1	Q17RS7	908 aa		13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	USP39	Q53GS9	565 aa	Known RBP	13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	TMEM92	Q6UXU6	159 aa		13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	SLC26A9	Q7LBE3	791 aa		13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	APTX	Q7Z2E3	356 aa	Known RBP	13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	ZNF677	Q86XU0	584 aa		13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	HJURP	Q8NCD3	748 aa	Predicted RBP	13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	MDGA1	Q8NFP4	955 aa		13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	DDX1	Q92499	740 aa	Known RBP	13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	C18orf8	Q96DM3	657 aa		13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	SLC2A13	Q96QE2	648 aa		13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	SEPT11	Q9NVA2	429 aa	Known RBP	13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	STIM2	Q9P246	746 aa		13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	NOCT	Q9UK39	431 aa	Known RBP	13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	FBXO10	Q9UK96	956 aa		13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	CDV3	Q9UKY7	258 aa	Known RBP	13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	CLEC4E	Q9ULY5	219 aa		13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	INVS	Q9Y283	1065 aa		13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	STARD13	Q9Y3M8	1113 aa		13.79	□□□□□ -0.2
BCAR1-222	ENST00000569340	GOLGA8S	H3BPF8	625 aa		13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	SLC2A3	P11169	496 aa		13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	CCR1	P32246	355 aa		13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	CDH5	P33151	784 aa	Predicted RBP	13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	SGSH	P51688	502 aa		13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	PITX1	P78337	314 aa	Predicted RBP	13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	LMNB2	Q03252	620 aa		13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	C2CD6	Q53TS8	623 aa		13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	FAM133B	Q5BKY9	247 aa	Known RBP	13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	PIK3R6	Q5UE93	754 aa		13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	RAP1GAP2	Q684P5	730 aa		13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	NADSYN1	Q6IA69	706 aa		13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	CHSY1	Q86X52	802 aa		13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	CARNMT1	Q8N4J0	409 aa		13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	ATP6V0D2	Q8N8Y2	350 aa		13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	AZIN2	Q96A70	460 aa		13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	SLC39A13	Q96H72	371 aa		13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	BTN2A3P	Q96KV6	586 aa		13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	ACOX2	Q99424	681 aa		13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	FUCA2	Q9BTY2	467 aa		13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	NUCKS1	Q9H1E3	243 aa	Known RBP	13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	ABCB8	Q9NUT2	735 aa		13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.78	□□□□□ -0.2	4e-8	■■□□□ 14.1
BCAR1-222	ENST00000569340	CACNA2D2	Q9NY47	1150 aa		13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.78	□□□□□ -0.2	3e-6	■□□□□ 10
BCAR1-222	ENST00000569340	STAP1	Q9ULZ2	295 aa		13.78	□□□□□ -0.2
BCAR1-222	ENST00000569340	PRR5-ARHGAP8	B1AHC4	643 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340		M0QYT0	321 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	DCLK1	O15075	740 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	TEX33	O43247	280 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	CCDC172	P0C7W6	258 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	CHRM1	P11229	460 aa	Predicted RBP	13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.77	□□□□□ -0.21	4e-9	■■■■□ 26.6
BCAR1-222	ENST00000569340	NOS2	P35228	1153 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	SULT1E1	P49888	294 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	NOMO3	P69849	1222 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	ARHGAP8	P85298	464 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	CDH18	Q13634	790 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	STARD3	Q14849	445 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	EIF4H	Q15056	248 aa	Known RBP	13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	E2F5	Q15329	346 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	ZSCAN23	Q3MJ62	389 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	GPR179	Q6PRD1	2367 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	TRIM72	Q6ZMU5	477 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	MMS22L	Q6ZRQ5	1243 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	LUZP1	Q86V48	1076 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	KBTBD6	Q86V97	674 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	XYLT1	Q86Y38	959 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	MFN1	Q8IWA4	741 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	LGI2	Q8N0V4	545 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	FAM160A2	Q8N612	972 aa	Predicted RBP	13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	ZNF397	Q8NF99	534 aa	Predicted RBP	13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	SPACA7	Q96KW9	195 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	CBX8	Q9HC52	389 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	RTN4	Q9NQC3	1192 aa	Known RBP	13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	ELOVL2	Q9NXB9	296 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	XPO7	Q9UIA9	1087 aa	Known RBP	13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	GGA2	Q9UJY4	613 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	RAD54B	Q9Y620	910 aa		13.77	□□□□□ -0.21
BCAR1-222	ENST00000569340	DNAH14	Q0VDD8	3507 aa		13.76	□□□□□ -0.21
BCAR1-222	ENST00000569340	KCNU1	A8MYU2	1149 aa		13.76	□□□□□ -0.21
BCAR1-222	ENST00000569340		F5H5T6	163 aa		13.76	□□□□□ -0.21
BCAR1-222	ENST00000569340	GOLGA6L19	H0YKK7	550 aa		13.76	□□□□□ -0.21
BCAR1-222	ENST00000569340	TIMM44	O43615	452 aa		13.76	□□□□□ -0.21
BCAR1-222	ENST00000569340	SYNCRIP	O60506	623 aa	Known RBP	13.76	□□□□□ -0.21
BCAR1-222	ENST00000569340	IGLV3-25	P01717	112 aa		13.76	□□□□□ -0.21
BCAR1-222	ENST00000569340	RET	P07949	1114 aa		13.76	□□□□□ -0.21
BCAR1-222	ENST00000569340	CHRNB2	P17787	502 aa		13.76	□□□□□ -0.21
BCAR1-222	ENST00000569340	TACR2	P21452	398 aa		13.76	□□□□□ -0.21
BCAR1-222	ENST00000569340	HLA-F	P30511	346 aa		13.76	□□□□□ -0.21
BCAR1-222	ENST00000569340	MATK	P42679	507 aa		13.76	□□□□□ -0.21
BCAR1-222	ENST00000569340	NSF	P46459	744 aa	Known RBP	13.76	□□□□□ -0.21
BCAR1-222	ENST00000569340	GABRB2	P47870	512 aa		13.76	□□□□□ -0.21
BCAR1-222	ENST00000569340	RPS24	P62847	133 aa	Known RBP	13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms