RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 FGF14Q92915 247 aa16.63■□□□□ 0.25
USB1-215ENST00000569252 AZIN2Q96A70 460 aa16.63■□□□□ 0.25
USB1-215ENST00000569252 OTUB2Q96DC9 234 aa16.63■□□□□ 0.25
USB1-215ENST00000569252 BTBD6Q96KE9 485 aa16.63■□□□□ 0.25
USB1-215ENST00000569252 BTN2A3PQ96KV6 586 aa16.63■□□□□ 0.25
USB1-215ENST00000569252 TKTL2Q9H0I9 626 aa16.63■□□□□ 0.25
USB1-215ENST00000569252 PPP2R2CQ9Y2T4 447 aa16.63■□□□□ 0.25
USB1-215ENST00000569252 NOTCH4Q99466 2003 aa16.63■□□□□ 0.25
USB1-215ENST00000569252 ANHXE9PGG2 379 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 BUB1O43683 1085 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 MTA2O94776 668 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 PROSCO94903 275 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 LATS1O95835 1130 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 IGLV3-25P01717 112 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 SLC1A1P43005 524 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 AIF1P55008 147 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 NR1H3Q13133 447 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 HTR4Q13639 388 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 PDGFRLQ15198 375 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 ZNF77Q15935 545 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 ZFYVE27Q5T4F4 411 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 TRNP1Q6NT89 227 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 SLFN11Q7Z7L1 901 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 FAM131BQ86XD5 332 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 SYCE1Q8N0S2 351 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 CSGALNACT1Q8TDX6 532 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 OSCP1Q8WVF1 389 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 SLC39A13Q96H72 371 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 ZFRQ96KR1 1074 aaKnown RBP16.62■□□□□ 0.25
USB1-215ENST00000569252 LACRTQ9GZZ8 138 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 KCNF1Q9H3M0 494 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 BRD9Q9H8M2 597 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 LZTFL1Q9NQ48 299 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 PIGVQ9NUD9 493 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 GUCA1BQ9UMX6 200 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 TFR2Q9UP52 801 aa16.62■□□□□ 0.25
USB1-215ENST00000569252 MACROD2A1Z1Q3 448 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 TYW5A2RUC4 315 aaKnown RBP16.61■□□□□ 0.25
USB1-215ENST00000569252 KCNU1A8MYU2 1149 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 SPOPO43791 374 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 CYBBP04839 570 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 GDI1P31150 447 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 PCK1P35558 622 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 HADHBP55084 474 aaKnown RBP16.61■□□□□ 0.25
USB1-215ENST00000569252 PITX1P78337 314 aaPredicted RBP16.61■□□□□ 0.25
USB1-215ENST00000569252 OGDHQ02218 1023 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 BOLA3Q53S33 107 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 EFHC2Q5JST6 749 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 ADGRF1Q5T601 910 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 SH3PXD2AQ5TCZ1 1133 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 POTEHQ6S545 545 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 VITQ6UXI7 678 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 LRRC31Q6UY01 552 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 DAAM2Q86T65 1068 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 CCDC117Q8IWD4 279 aaPredicted RBP16.61■□□□□ 0.25
USB1-215ENST00000569252 NIPA2Q8N8Q9 360 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 KIAA1524Q8TCG1 905 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 IRF7Q92985 503 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 ATP2A3Q93084 1043 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 FCRL2Q96LA5 508 aaPredicted RBP16.61■□□□□ 0.25
USB1-215ENST00000569252 HAPLN3Q96S86 360 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 TRIM7Q9C029 511 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 SIK2Q9H0K1 926 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 PCSK1NQ9UHG2 260 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 AGO1Q9UL18 857 aaKnown RBP16.61■□□□□ 0.25
USB1-215ENST00000569252 USP18Q9UMW8 372 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 DUSP10Q9Y6W6 482 aa16.61■□□□□ 0.25
USB1-215ENST00000569252 RCCD1A6NED2 376 aa16.6■□□□□ 0.25
USB1-215ENST00000569252 GOLGA6L9A6NEM1 432 aa16.6■□□□□ 0.25
USB1-215ENST00000569252 CHADO15335 359 aa16.6■□□□□ 0.25
USB1-215ENST00000569252 ACSL4O60488 711 aa16.6■□□□□ 0.25
USB1-215ENST00000569252 NFATC1O95644 943 aa16.6■□□□□ 0.25
USB1-215ENST00000569252 IGLV3-27P01718 113 aa16.6■□□□□ 0.25
USB1-215ENST00000569252 TFE3P19532 575 aaPredicted RBP16.6■□□□□ 0.25
USB1-215ENST00000569252 FCARP24071 287 aa16.6■□□□□ 0.25
USB1-215ENST00000569252 MAN1A1P33908 653 aa16.6■□□□□ 0.25
USB1-215ENST00000569252 ADRA1BP35368 520 aa16.6■□□□□ 0.25
USB1-215ENST00000569252 HDAC4P56524 1084 aa16.6■□□□□ 0.25
USB1-215ENST00000569252 ZXDBP98169 803 aa16.6■□□□□ 0.25
USB1-215ENST00000569252 AMPD2Q01433 879 aa16.6■□□□□ 0.25
USB1-215ENST00000569252 USP4Q13107 963 aa16.6■□□□□ 0.25
USB1-215ENST00000569252 GRM2Q14416 872 aa16.6■□□□□ 0.25
USB1-215ENST00000569252 ERMARDQ5T6L9 678 aa16.6■□□□□ 0.25
USB1-215ENST00000569252 ZNF662Q6ZS27 426 aa16.6■□□□□ 0.25
USB1-215ENST00000569252 ALS2CR12Q96Q35 445 aa16.6■□□□□ 0.25
USB1-215ENST00000569252 HINFPQ9BQA5 517 aa16.6■□□□□ 0.25
USB1-215ENST00000569252 PLA2G2FQ9BZM2 168 aa16.6■□□□□ 0.25
USB1-215ENST00000569252 ARHGEF38Q9NXL2 777 aa16.6■□□□□ 0.25
USB1-215ENST00000569252 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.6■□□□□ 0.25
USB1-215ENST00000569252 ANAPC1Q9H1A4 1944 aa16.59■□□□□ 0.25
USB1-215ENST00000569252 KRT7P08729 469 aa16.59■□□□□ 0.25
USB1-215ENST00000569252 MSNP26038 577 aaKnown RBP16.59■□□□□ 0.25
USB1-215ENST00000569252 MIPP30301 263 aa16.59■□□□□ 0.25
USB1-215ENST00000569252 ATXN1P54253 815 aaKnown RBP16.59■□□□□ 0.25
USB1-215ENST00000569252 FOXK2Q01167 660 aa16.59■□□□□ 0.25
USB1-215ENST00000569252 PFKPQ01813 784 aa16.59■□□□□ 0.25
USB1-215ENST00000569252 FCHO2Q0JRZ9 810 aa16.59■□□□□ 0.25
USB1-215ENST00000569252 EIF4EBP2Q13542 120 aaPredicted RBP16.59■□□□□ 0.25
USB1-215ENST00000569252 HS1BP3Q53T59 392 aa16.59■□□□□ 0.25
USB1-215ENST00000569252 BBS7Q8IWZ6 715 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms