RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 SOWAHDA6NJG2 315 aa15.05■□□□□ -0
COMMD4-225ENST00000569245 ZBTB24O43167 697 aaPredicted RBP15.05■□□□□ -0
COMMD4-225ENST00000569245 PAPSS1O43252 624 aaPredicted RBP15.05■□□□□ -0
COMMD4-225ENST00000569245 PENKP01210 267 aaPredicted RBP15.05■□□□□ -0
COMMD4-225ENST00000569245 PLEKP08567 350 aaPredicted RBP15.05■□□□□ -0
COMMD4-225ENST00000569245 EIF4A3P38919 411 aaKnown RBP15.05■□□□□ -0
COMMD4-225ENST00000569245 WASP42768 502 aa15.05■□□□□ -0
COMMD4-225ENST00000569245 SNX16P57768 344 aa15.05■□□□□ -0
COMMD4-225ENST00000569245 YWHAZP63104 245 aaKnown RBP15.05■□□□□ -0
COMMD4-225ENST00000569245 USP39Q53GS9 565 aaKnown RBP15.05■□□□□ -0
COMMD4-225ENST00000569245 TDRD12Q587J7 1177 aaKnown RBP15.05■□□□□ -0
COMMD4-225ENST00000569245 ADGRF1Q5T601 910 aa15.05■□□□□ -0
COMMD4-225ENST00000569245 FYB2Q5VWT5 728 aa15.05■□□□□ -0
COMMD4-225ENST00000569245 NUGGCQ68CJ6 796 aa15.05■□□□□ -0
COMMD4-225ENST00000569245 TMEM92Q6UXU6 159 aa15.05■□□□□ -0
COMMD4-225ENST00000569245 RAD9BQ6WBX8 426 aa15.05■□□□□ -0
COMMD4-225ENST00000569245 ZNF571Q7Z3V5 609 aaPredicted RBP15.05■□□□□ -0
COMMD4-225ENST00000569245 CHPFQ8IZ52 775 aa15.05■□□□□ -0
COMMD4-225ENST00000569245 PGBD3Q8N328 593 aa15.05■□□□□ -0
COMMD4-225ENST00000569245 ADAM32Q8TC27 787 aa15.05■□□□□ -0
COMMD4-225ENST00000569245 TMA16Q96EY4 203 aaKnown RBP15.05■□□□□ -0
COMMD4-225ENST00000569245 CCDC42Q96M95 316 aa15.05■□□□□ -0
COMMD4-225ENST00000569245 SYT11Q9BT88 431 aa15.05■□□□□ -0
COMMD4-225ENST00000569245 LHX5Q9H2C1 402 aa15.05■□□□□ -0
COMMD4-225ENST00000569245 POPDC2Q9HBU9 364 aa15.05■□□□□ -0
COMMD4-225ENST00000569245 NOCTQ9UK39 431 aaKnown RBP15.05■□□□□ -0
COMMD4-225ENST00000569245 PCDHGC3Q9UN70 934 aa15.05■□□□□ -0
COMMD4-225ENST00000569245 INVSQ9Y283 1065 aa15.05■□□□□ -0
COMMD4-225ENST00000569245 PRRT4C9JH25 899 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 ADAM23O75077 832 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 FYNP06241 537 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 RETP07949 1114 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 CISD3P0C7P0 127 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 CYP11B1P15538 503 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 NTSR1P30989 418 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 CYLC1P35663 651 aaPredicted RBP15.04■□□□□ -0
COMMD4-225ENST00000569245 EGFLAMQ63HQ2 1017 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 KBTBD6Q86V97 674 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 VPS36Q86VN1 386 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 ZNF677Q86XU0 584 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 WDTC1Q8N5D0 677 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 FAM160A2Q8N612 972 aaPredicted RBP15.04■□□□□ -0
COMMD4-225ENST00000569245 GPR161Q8N6U8 529 aaKnown RBP15.04■□□□□ -0
COMMD4-225ENST00000569245 C1orf131Q8NDD1 294 aaKnown RBP15.04■□□□□ -0
COMMD4-225ENST00000569245 EPS8L1Q8TE68 723 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 DQX1Q8TE96 717 aaKnown RBP15.04■□□□□ -0
COMMD4-225ENST00000569245 P2RY11Q96G91 374 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 SERPINB11Q96P15 392 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 CPXM1Q96SM3 734 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 AGPAT1Q99943 283 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 TPSD1Q9BZJ3 242 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 USP18Q9UMW8 372 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 STARD13Q9Y3M8 1113 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 EPN1Q9Y6I3 576 aaPredicted RBP15.04■□□□□ -0
COMMD4-225ENST00000569245 ZNF292O60281 2723 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 ATG2BQ96BY7 2078 aa15.04■□□□□ -0
COMMD4-225ENST00000569245 GVINP1Q7Z2Y8 2422 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 TCRBV21S2A2A0A5A6 115 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 EIF3CLB5ME19 914 aaKnown RBP15.03■□□□□ -0
COMMD4-225ENST00000569245 NDUFA10O95299 355 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 LCA5LO95447 670 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 LATS1O95835 1130 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 HOXB2P14652 356 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 GBP1P32455 592 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 RING1Q06587 406 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 SPEM2Q0P670 501 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 TAF5Q15542 800 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 TAF3Q5VWG9 929 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 SYPL2Q5VXT5 272 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 OR6B2Q6IFH4 312 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 NOP9Q86U38 636 aaKnown RBP15.03■□□□□ -0
COMMD4-225ENST00000569245 FAM217AQ8IXS0 508 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 TMEM35BQ8NCS4 154 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 MDGA1Q8NFP4 955 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 OLIG1Q8TAK6 271 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 IPO4Q8TEX9 1081 aaKnown RBP15.03■□□□□ -0
COMMD4-225ENST00000569245 HMGB4Q8WW32 186 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 DDX1Q92499 740 aaKnown RBP15.03■□□□□ -0
COMMD4-225ENST00000569245 ERLEC1Q96DZ1 483 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 EIF3CQ99613 913 aaKnown RBP15.03■□□□□ -0
COMMD4-225ENST00000569245 DDX50Q9BQ39 737 aaKnown RBP15.03■□□□□ -0
COMMD4-225ENST00000569245 DEF6Q9H4E7 631 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 TJP2Q9UDY2 1190 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 FBXO10Q9UK96 956 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 TLR6Q9Y2C9 796 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 ZKSCAN5Q9Y2L8 839 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 SLC27A6Q9Y2P4 619 aa15.03■□□□□ -0
COMMD4-225ENST00000569245 SYNJ2BP-COX16A0A087WUM0 186 aa15.02■□□□□ -0
COMMD4-225ENST00000569245 GOLGA6L7A0A1B0GV03 622 aa15.02■□□□□ -0
COMMD4-225ENST00000569245 DCLK1O15075 740 aa15.02■□□□□ -0
COMMD4-225ENST00000569245 AKR1B10O60218 316 aa15.02■□□□□ -0
COMMD4-225ENST00000569245 ACSL4O60488 711 aa15.02■□□□□ -0
COMMD4-225ENST00000569245 GRAP2O75791 330 aa15.02■□□□□ -0
COMMD4-225ENST00000569245 MOCS2O96007 188 aaPredicted RBP15.02■□□□□ -0
COMMD4-225ENST00000569245 IGLV3-27P01718 113 aa15.02■□□□□ -0
COMMD4-225ENST00000569245 CHRM1P11229 460 aaPredicted RBP15.02■□□□□ -0
COMMD4-225ENST00000569245 HNRNPLP14866 589 aaKnown RBP eCLIP15.02■□□□□ -0
COMMD4-225ENST00000569245 CDR2Q01850 454 aa15.02■□□□□ -0
COMMD4-225ENST00000569245 ELF2Q15723 593 aa15.02■□□□□ -0
COMMD4-225ENST00000569245 SLC18A3Q16572 532 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms