RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 PTPN5P54829 565 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 ADKP55263 362 aaKnown RBP13.28□□□□□ -0.28
CDT1-203ENST00000569140 CSTF1Q05048 431 aaKnown RBP13.28□□□□□ -0.28
CDT1-203ENST00000569140 MESP2Q0VG99 397 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 PPP2R5DQ14738 602 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 C15orf59Q2T9L4 293 aaPredicted RBP13.28□□□□□ -0.28
CDT1-203ENST00000569140 FAM133BQ5BKY9 247 aaKnown RBP13.28□□□□□ -0.28
CDT1-203ENST00000569140 OTUD1Q5VV17 481 aaPredicted RBP13.28□□□□□ -0.28
CDT1-203ENST00000569140 TRNP1Q6NT89 227 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 PKN3Q6P5Z2 889 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 TSSK4Q6SA08 328 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 FAM217AQ8IXS0 508 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 DRC7Q8IY82 874 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 CFAP52Q8N1V2 620 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 CARNMT1Q8N4J0 409 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 CCDC33Q8N5R6 958 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 TERB1Q8NA31 727 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 HJURPQ8NCD3 748 aaPredicted RBP13.28□□□□□ -0.28
CDT1-203ENST00000569140 OR8K1Q8NGG5 319 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 CCDC26Q8TAB7 109 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 PRICKLE1Q96MT3 831 aaPredicted RBP13.28□□□□□ -0.28
CDT1-203ENST00000569140 IER2Q9BTL4 223 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 TKTL2Q9H0I9 626 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 SIK2Q9H0K1 926 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 ZDHHC4Q9NPG8 344 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 CALCOCO1Q9P1Z2 691 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 SLC8A2Q9UPR5 921 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 MYOFQ9NZM1 2061 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 AKR1B15C9JRZ8 316 aaPredicted RBP13.27□□□□□ -0.29
CDT1-203ENST00000569140 K7EQS6 105 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 ATG13O75143 517 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 RTN2O75298 545 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 HOXD9P28356 352 aaPredicted RBP13.27□□□□□ -0.29
CDT1-203ENST00000569140 EIF4A3P38919 411 aaKnown RBP13.27□□□□□ -0.29
CDT1-203ENST00000569140 CXCL12P48061 93 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 GSCP56915 257 aaPredicted RBP13.27□□□□□ -0.29
CDT1-203ENST00000569140 RPS24P62847 133 aaKnown RBP13.27□□□□□ -0.29
CDT1-203ENST00000569140 SATB1Q01826 763 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 CDH18Q13634 790 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 GAS6Q14393 721 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 MS4A13Q5J8X5 152 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 BRMS1LQ5PSV4 323 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 RABGAP1LQ5R372 815 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 PIK3R6Q5UE93 754 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 HGSNATQ68CP4 663 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 CIR1Q86X95 450 aaPredicted RBP13.27□□□□□ -0.29
CDT1-203ENST00000569140 FAM131BQ86XD5 332 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 CNGA4Q8IV77 575 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 MFN1Q8IWA4 741 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 SPEM1Q8N4L4 309 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 OLIG1Q8TAK6 271 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 EZH1Q92800 747 aaPredicted RBP13.27□□□□□ -0.29
CDT1-203ENST00000569140 ATOH1Q92858 354 aaPredicted RBP13.27□□□□□ -0.29
CDT1-203ENST00000569140 AZIN2Q96A70 460 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 ACDQ96AP0 544 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 TRIM11Q96F44 468 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 RPRD1AQ96P16 312 aaPredicted RBP13.27□□□□□ -0.29
CDT1-203ENST00000569140 ADAM33Q9BZ11 813 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 ABHD10Q9NUJ1 306 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 PARVAQ9NVD7 372 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 CNOT8Q9UFF9 292 aaKnown RBP13.27□□□□□ -0.29
CDT1-203ENST00000569140 STOML2Q9UJZ1 356 aa13.27□□□□□ -0.29
CDT1-203ENST00000569140 ANTXRLA6NF34 631 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 C2CD4BA6NLJ0 364 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 SIGLEC16A6NMB1 481 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 H0Y626 953 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 AKR1B10O60218 316 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 PAGE1O75459 146 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 KLF8O95600 359 aaPredicted RBP13.26□□□□□ -0.29
CDT1-203ENST00000569140 ADCY5O95622 1261 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 GZMAP12544 262 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 RFC1P35251 1148 aaPredicted RBP13.26□□□□□ -0.29
CDT1-203ENST00000569140 CCDC14Q49A88 953 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 CCDC122Q5T0U0 273 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 SH3PXD2AQ5TCZ1 1133 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 EMC10Q5UCC4 262 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 HEATR6Q6AI08 1181 aaKnown RBP13.26□□□□□ -0.29
CDT1-203ENST00000569140 SCYL2Q6P3W7 929 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 WDR59Q6PJI9 974 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 ARCQ7LC44 396 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 ANKS1BQ7Z6G8 1248 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 PHTF2Q8N3S3 785 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 ALLCQ8N6M5 410 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 ZNF513Q8N8E2 541 aaPredicted RBP13.26□□□□□ -0.29
CDT1-203ENST00000569140 FAM172AQ8WUF8 416 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 ERLEC1Q96DZ1 483 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 MYEOVQ96EZ4 313 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 P2RY11Q96G91 374 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 VCPIP1Q96JH7 1222 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 DNAJC7Q99615 494 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 CIPCQ9C0C6 399 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 KCNH6Q9H252 994 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 TMPRSS4Q9NRS4 437 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 FAM86C1Q9NVL1 165 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 POLR3BQ9NW08 1133 aaPredicted RBP13.26□□□□□ -0.29
CDT1-203ENST00000569140 ARHGAP20Q9P2F6 1191 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 VANGL2Q9ULK5 521 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 CLEC4EQ9ULY5 219 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 SNX10Q9Y5X0 201 aa13.26□□□□□ -0.29
CDT1-203ENST00000569140 HS3ST4Q9Y661 456 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms