RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 HPS3Q969F9 1004 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 SERAC1Q96JX3 654 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 ORAI3Q9BRQ5 295 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 ABCG4Q9H172 646 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 USP29Q9HBJ7 922 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 PRSS16Q9NQE7 514 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 TBC1D7Q9P0N9 293 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 NAGPAQ9UK23 515 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 FZD4Q9ULV1 537 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 SSUH2Q9Y2M2 353 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 KNL1Q8NG31 2342 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 HELZP42694 1942 aaKnown RBP9.07□□□□□ -0.96
SMG1-216ENST00000569122 ANAPC1Q9H1A4 1944 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 A0A1W2PQH9 124 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 A0A1W2PR77 199 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 H3BQV1 296 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 PYCARD-AS1I3L0S3 204 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 USP12O75317 370 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 AFPP02771 609 aaKnown RBP9.07□□□□□ -0.96
SMG1-216ENST00000569122 MPOP05164 745 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 GP1BAP07359 652 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 ALPPL2P10696 532 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 GP1BBP13224 206 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 POLR2EP19388 210 aaKnown RBP9.07□□□□□ -0.96
SMG1-216ENST00000569122 MLLT3P42568 568 aaPredicted RBP9.07□□□□□ -0.96
SMG1-216ENST00000569122 HARS2P49590 506 aaKnown RBP9.07□□□□□ -0.96
SMG1-216ENST00000569122 NFATC3Q12968 1075 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 SERINC3Q13530 473 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 PSMD6Q15008 389 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 SNRNP35Q16560 246 aaKnown RBP9.07□□□□□ -0.96
SMG1-216ENST00000569122 PROX2Q3B8N5 592 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 KMT5BQ4FZB7 885 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 ZNF667Q5HYK9 610 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 RRAGBQ5VZM2 374 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 NCEH1Q6PIU2 408 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 PRPF39Q86UA1 669 aaKnown RBP9.07□□□□□ -0.96
SMG1-216ENST00000569122 CBWD2Q8IUF1 395 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 CCDC65Q8IXS2 484 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 CRYBG2Q8N1P7 616 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 SLC2A14Q8TDB8 520 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 CGRRF1Q99675 332 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 SMOQ99835 787 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 OMDQ99983 421 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 ARHGAP9Q9BRR9 750 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 IRX2Q9BZI1 471 aaPredicted RBP9.07□□□□□ -0.96
SMG1-216ENST00000569122 RSPH9Q9H1X1 276 aaPredicted RBP9.07□□□□□ -0.96
SMG1-216ENST00000569122 PABPC3Q9H361 631 aaKnown RBP9.07□□□□□ -0.96
SMG1-216ENST00000569122 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.07□□□□□ -0.96
SMG1-216ENST00000569122 HSPBP1Q9NZL4 362 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 AGO1Q9UL18 857 aaKnown RBP9.07□□□□□ -0.96
SMG1-216ENST00000569122 NME7Q9Y5B8 376 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 CEP192Q8TEP8 1941 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 PIEZO2Q9H5I5 2752 aa9.07□□□□□ -0.96
SMG1-216ENST00000569122 COL5A1P20908 1838 aaPredicted RBP9.06□□□□□ -0.96
SMG1-216ENST00000569122 TERTO14746 1132 aaKnown RBP9.06□□□□□ -0.96
SMG1-216ENST00000569122 CYP26A1O43174 497 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 KLKB1P03952 638 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 WNT1P04628 370 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 SLFN14P0C7P3 912 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 ATXN8OSP0DMR3 200 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 PGFP49763 221 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 MYL6P60660 151 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 BNIP3Q12983 259 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 ZNF699Q32M78 642 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 C6orf132Q5T0Z8 1188 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 CDCP2Q5VXM1 449 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 TMEM215Q68D42 235 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 SND1Q7KZF4 910 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMG1-216ENST00000569122 CHST9Q7L1S5 443 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 RSRC2Q7L4I2 434 aaKnown RBP9.06□□□□□ -0.96
SMG1-216ENST00000569122 CCDC186Q7Z3E2 898 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 ACOT1Q86TX2 421 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 DENND1CQ8IV53 801 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMG1-216ENST00000569122 KDM1BQ8NB78 822 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 ZMIZ2Q8NF64 920 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 PLD4Q96BZ4 506 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 DNAJC19Q96DA6 116 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 TMA16Q96EY4 203 aaKnown RBP9.06□□□□□ -0.96
SMG1-216ENST00000569122 VCPIP1Q96JH7 1222 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 FAM84AQ96KN4 292 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 LRRC27Q9C0I9 530 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 KDM4CQ9H3R0 1056 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 PANK4Q9NVE7 773 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 OSER1Q9NX31 292 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 NCKIPSDQ9NZQ3 722 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 ANKMY1Q9P2S6 941 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 RASAL2Q9UJF2 1139 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 DMTF1Q9Y222 760 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 UNC79Q9P2D8 2635 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 ANK1P16157 1881 aa9.06□□□□□ -0.96
SMG1-216ENST00000569122 FRMD3A2A2Y4 597 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 TARSL2A2RTX5 802 aaKnown RBP9.05□□□□□ -0.96
SMG1-216ENST00000569122 NEMP2A6NFY4 417 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 MDM4O15151 490 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 SIGLEC6O43699 453 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 OPA1O60313 960 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 RNASEH2AO75792 299 aaKnown RBP9.05□□□□□ -0.96
SMG1-216ENST00000569122 BEST1O76090 585 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 LATS1O95835 1130 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms