RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 KLK13Q9UKR3 277 aa14.24□□□□□ -0.13
CNOT1-215ENST00000569020 PCDHB4Q9Y5E5 795 aa14.24□□□□□ -0.13
CNOT1-215ENST00000569020 TMEM131Q92545 1883 aa14.24□□□□□ -0.13
CNOT1-215ENST00000569020 USP24Q9UPU5 2620 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 BCAT2O15382 392 aaPredicted RBP14.23□□□□□ -0.13
CNOT1-215ENST00000569020 MSI1O43347 362 aaKnown RBP14.23□□□□□ -0.13
CNOT1-215ENST00000569020 CER1O95813 267 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 ATP5BP06576 529 aaKnown RBP14.23□□□□□ -0.13
CNOT1-215ENST00000569020 PABPC1P11940 636 aaKnown RBP14.23□□□□□ -0.13
CNOT1-215ENST00000569020 HLA-EP13747 358 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 PPP1R2P41236 205 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 FAM193AP78312 1265 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 CETN1Q12798 172 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 CAMK2GQ13555 558 aaPredicted RBP14.23□□□□□ -0.13
CNOT1-215ENST00000569020 STILQ15468 1287 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 CCDC40Q4G0X9 1142 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 PKDCCQ504Y2 493 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 NUGGCQ68CJ6 796 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 IL27RAQ6UWB1 636 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 FAM124AQ86V42 546 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 NAXDQ8IW45 347 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 UNC45BQ8IWX7 931 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 PPM1KQ8N3J5 372 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 ZCCHC14Q8WYQ9 949 aaKnown RBP14.23□□□□□ -0.13
CNOT1-215ENST00000569020 IRGQQ8WZA9 623 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 ERCC4Q92889 916 aaPredicted RBP14.23□□□□□ -0.13
CNOT1-215ENST00000569020 TIGD1Q96MW7 591 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 IRX2Q9BZI1 471 aaPredicted RBP14.23□□□□□ -0.13
CNOT1-215ENST00000569020 PCED1AQ9H1Q7 454 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 LHX5Q9H2C1 402 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 ABCB8Q9NUT2 735 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 EIF2B4Q9UI10 523 aaKnown RBP14.23□□□□□ -0.13
CNOT1-215ENST00000569020 GGA2Q9UJY4 613 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 CACNA1EQ15878 2313 aa14.23□□□□□ -0.13
CNOT1-215ENST00000569020 TP53BP1Q12888 1972 aaPredicted RBP14.22□□□□□ -0.13
CNOT1-215ENST00000569020 M0QYV0 167 aa14.22□□□□□ -0.13
CNOT1-215ENST00000569020 LTFP02788 710 aa14.22□□□□□ -0.13
CNOT1-215ENST00000569020 MATKP42679 507 aa14.22□□□□□ -0.13
CNOT1-215ENST00000569020 SLC11A2P49281 568 aa14.22□□□□□ -0.13
CNOT1-215ENST00000569020 RGS7P49802 495 aa14.22□□□□□ -0.13
CNOT1-215ENST00000569020 CNGA2Q16280 664 aa14.22□□□□□ -0.13
CNOT1-215ENST00000569020 MPP7Q5T2T1 576 aa14.22□□□□□ -0.13
CNOT1-215ENST00000569020 MBLAC2Q68D91 279 aa14.22□□□□□ -0.13
CNOT1-215ENST00000569020 PMF1Q6P1K2 205 aa14.22□□□□□ -0.13
CNOT1-215ENST00000569020 MSANTD2Q6P1R3 559 aa14.22□□□□□ -0.13
CNOT1-215ENST00000569020 CHCHD4Q8N4Q1 142 aa14.22□□□□□ -0.13
CNOT1-215ENST00000569020 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.22□□□□□ -0.13
CNOT1-215ENST00000569020 ZNF557Q8N988 423 aaPredicted RBP14.22□□□□□ -0.13
CNOT1-215ENST00000569020 ENGASEQ8NFI3 743 aa14.22□□□□□ -0.13
CNOT1-215ENST00000569020 CYB5D2Q8WUJ1 264 aa14.22□□□□□ -0.13
CNOT1-215ENST00000569020 SLC35F5Q8WV83 523 aa14.22□□□□□ -0.13
CNOT1-215ENST00000569020 DHTKD1Q96HY7 919 aaPredicted RBP14.22□□□□□ -0.13
CNOT1-215ENST00000569020 CEP63Q96MT8 703 aa14.22□□□□□ -0.13
CNOT1-215ENST00000569020 CAMK1GQ96NX5 476 aa14.22□□□□□ -0.13
CNOT1-215ENST00000569020 TMEM245Q9H330 911 aa14.22□□□□□ -0.13
CNOT1-215ENST00000569020 GAREM1Q9H706 876 aa14.22□□□□□ -0.13
CNOT1-215ENST00000569020 FBRSQ9HAH7 460 aa14.22□□□□□ -0.13
CNOT1-215ENST00000569020 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.22□□□□□ -0.13
CNOT1-215ENST00000569020 NYNRINQ9P2P1 1898 aaKnown RBP14.21□□□□□ -0.13
CNOT1-215ENST00000569020 TYW5A2RUC4 315 aaKnown RBP14.21□□□□□ -0.13
CNOT1-215ENST00000569020 FAM221BA6H8Z2 402 aa14.21□□□□□ -0.13
CNOT1-215ENST00000569020 PIK3R2O00459 728 aa14.21□□□□□ -0.13
CNOT1-215ENST00000569020 PMM2O15305 246 aa14.21□□□□□ -0.13
CNOT1-215ENST00000569020 P4HA2O15460 535 aa14.21□□□□□ -0.13
CNOT1-215ENST00000569020 IRAK2O43187 625 aa14.21□□□□□ -0.13
CNOT1-215ENST00000569020 TBL1XO60907 577 aa14.21□□□□□ -0.13
CNOT1-215ENST00000569020 DNTTP04053 509 aa14.21□□□□□ -0.13
CNOT1-215ENST00000569020 DLDP09622 509 aaKnown RBP14.21□□□□□ -0.13
CNOT1-215ENST00000569020 POLR2EP19388 210 aaKnown RBP14.21□□□□□ -0.13
CNOT1-215ENST00000569020 TBX4P57082 545 aa14.21□□□□□ -0.13
CNOT1-215ENST00000569020 ISM2Q6H9L7 571 aa14.21□□□□□ -0.13
CNOT1-215ENST00000569020 KIAA0907Q7Z7F0 614 aaPredicted RBP14.21□□□□□ -0.13
CNOT1-215ENST00000569020 ADIPOR2Q86V24 386 aa14.21□□□□□ -0.13
CNOT1-215ENST00000569020 ZNF366Q8N895 744 aa14.21□□□□□ -0.13
CNOT1-215ENST00000569020 TFAP2BQ92481 460 aa14.21□□□□□ -0.13
CNOT1-215ENST00000569020 SNX19Q92543 992 aa14.21□□□□□ -0.13
CNOT1-215ENST00000569020 HSFY1Q96LI6 401 aa14.21□□□□□ -0.13
CNOT1-215ENST00000569020 TM7SF3Q9NS93 570 aa14.21□□□□□ -0.13
CNOT1-215ENST00000569020 SUN2Q9UH99 717 aa14.21□□□□□ -0.13
CNOT1-215ENST00000569020 SRRM3A6NNA2 597 aaPredicted RBP14.2□□□□□ -0.14
CNOT1-215ENST00000569020 RNF225M0QZC1 329 aaPredicted RBP14.2□□□□□ -0.14
CNOT1-215ENST00000569020 ACSL4O60488 711 aa14.2□□□□□ -0.14
CNOT1-215ENST00000569020 FBXO21O94952 628 aa14.2□□□□□ -0.14
CNOT1-215ENST00000569020 IGLV3-27P01718 113 aa14.2□□□□□ -0.14
CNOT1-215ENST00000569020 FTH1P19P0C7X4 201 aa14.2□□□□□ -0.14
CNOT1-215ENST00000569020 ZNF883P0CG24 379 aa14.2□□□□□ -0.14
CNOT1-215ENST00000569020 BRD2P25440 801 aaKnown RBP14.2□□□□□ -0.14
CNOT1-215ENST00000569020 ACSL1P33121 698 aa14.2□□□□□ -0.14
CNOT1-215ENST00000569020 SGSHP51688 502 aa14.2□□□□□ -0.14
CNOT1-215ENST00000569020 ZBTB16Q05516 673 aa14.2□□□□□ -0.14
CNOT1-215ENST00000569020 RING1Q06587 406 aa14.2□□□□□ -0.14
CNOT1-215ENST00000569020 BECN1Q14457 450 aa14.2□□□□□ -0.14
CNOT1-215ENST00000569020 PTPRNQ16849 979 aa14.2□□□□□ -0.14
CNOT1-215ENST00000569020 PIK3R6Q5UE93 754 aa14.2□□□□□ -0.14
CNOT1-215ENST00000569020 RFWD3Q6PCD5 774 aa14.2□□□□□ -0.14
CNOT1-215ENST00000569020 RAB44Q7Z6P3 723 aaPredicted RBP14.2□□□□□ -0.14
CNOT1-215ENST00000569020 MFN1Q8IWA4 741 aa14.2□□□□□ -0.14
CNOT1-215ENST00000569020 CCDC117Q8IWD4 279 aaPredicted RBP14.2□□□□□ -0.14
CNOT1-215ENST00000569020 SETD7Q8WTS6 366 aaKnown RBP14.2□□□□□ -0.14
CNOT1-215ENST00000569020 CLEC4CQ8WTT0 213 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms