RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 ZNF557Q8N988 423 aaPredicted RBP30.52■■■□□ 2.48
RAB40C-211ENST00000568586 ADAM32Q8TC27 787 aa30.52■■■□□ 2.48
RAB40C-211ENST00000568586 NETO1Q8TDF5 533 aa30.52■■■□□ 2.48
RAB40C-211ENST00000568586 RLN3Q8WXF3 142 aa30.52■■■□□ 2.48
RAB40C-211ENST00000568586 DDX1Q92499 740 aaKnown RBP30.52■■■□□ 2.48
RAB40C-211ENST00000568586 VPS16Q9H269 839 aa30.52■■■□□ 2.48
RAB40C-211ENST00000568586 GANQ9H2C0 597 aa30.52■■■□□ 2.48
RAB40C-211ENST00000568586 VPS45Q9NRW7 570 aa30.52■■■□□ 2.48
RAB40C-211ENST00000568586 HSF2BPO75031 334 aa30.51■■■□□ 2.47
RAB40C-211ENST00000568586 NDUFV2P19404 249 aa30.51■■■□□ 2.47
RAB40C-211ENST00000568586 IL12RB1P42701 662 aa30.51■■■□□ 2.47
RAB40C-211ENST00000568586 MYL5Q02045 173 aa30.51■■■□□ 2.47
RAB40C-211ENST00000568586 PTPN20Q4JDL3 420 aa30.51■■■□□ 2.47
RAB40C-211ENST00000568586 PGBD3Q8N328 593 aa30.51■■■□□ 2.47
RAB40C-211ENST00000568586 ZNF397Q8NF99 534 aaPredicted RBP30.51■■■□□ 2.47
RAB40C-211ENST00000568586 LMLNQ96KR4 655 aa30.51■■■□□ 2.47
RAB40C-211ENST00000568586 CALCOCO1Q9P1Z2 691 aa30.51■■■□□ 2.47
RAB40C-211ENST00000568586 DAAM1Q9Y4D1 1078 aa30.51■■■□□ 2.47
RAB40C-211ENST00000568586 CEP83Q9Y592 693 aa30.51■■■□□ 2.47
RAB40C-211ENST00000568586 F8VZ95 297 aa30.5■■■□□ 2.47
RAB40C-211ENST00000568586 ZBTB24O43167 697 aaPredicted RBP30.5■■■□□ 2.47
RAB40C-211ENST00000568586 ERBB2P04626 1255 aa30.5■■■□□ 2.47
RAB40C-211ENST00000568586 C7P10643 843 aa30.5■■■□□ 2.47
RAB40C-211ENST00000568586 ZNF234Q14588 700 aa30.5■■■□□ 2.47
RAB40C-211ENST00000568586 DCAF6Q58WW2 860 aa30.5■■■□□ 2.47
RAB40C-211ENST00000568586 MS4A13Q5J8X5 152 aa30.5■■■□□ 2.47
RAB40C-211ENST00000568586 SLC26A9Q7LBE3 791 aa30.5■■■□□ 2.47
RAB40C-211ENST00000568586 METTL3Q86U44 580 aaKnown RBP30.5■■■□□ 2.47
RAB40C-211ENST00000568586 ADIPOR2Q86V24 386 aa30.5■■■□□ 2.47
RAB40C-211ENST00000568586 ZDHHC17Q8IUH5 632 aa30.5■■■□□ 2.47
RAB40C-211ENST00000568586 FRMD1Q8N878 549 aa30.5■■■□□ 2.47
RAB40C-211ENST00000568586 HJURPQ8NCD3 748 aaPredicted RBP30.5■■■□□ 2.47
RAB40C-211ENST00000568586 MRGPRX1Q96LB2 322 aa30.5■■■□□ 2.47
RAB40C-211ENST00000568586 PRICKLE1Q96MT3 831 aaPredicted RBP30.5■■■□□ 2.47
RAB40C-211ENST00000568586 SLTMQ9NWH9 1034 aaKnown RBP eCLIP30.5■■■□□ 2.471e-6■■■□□ 16.2
RAB40C-211ENST00000568586 LIMA1Q9UHB6 759 aaKnown RBP30.5■■■□□ 2.47
RAB40C-211ENST00000568586 RAD54BQ9Y620 910 aa30.5■■■□□ 2.47
RAB40C-211ENST00000568586 ZNF217O75362 1048 aa30.49■■■□□ 2.47
RAB40C-211ENST00000568586 ZNF18P17022 549 aa30.49■■■□□ 2.47
RAB40C-211ENST00000568586 GABRB2P47870 512 aa30.49■■■□□ 2.47
RAB40C-211ENST00000568586 ATXN1P54253 815 aaKnown RBP30.49■■■□□ 2.47
RAB40C-211ENST00000568586 PITX1P78337 314 aaPredicted RBP30.49■■■□□ 2.47
RAB40C-211ENST00000568586 NCAPHQ15003 741 aa30.49■■■□□ 2.47
RAB40C-211ENST00000568586 ZC3H12AQ5D1E8 599 aaKnown RBP30.49■■■□□ 2.47
RAB40C-211ENST00000568586 FAM183BPQ6ZVS7 135 aa30.49■■■□□ 2.47
RAB40C-211ENST00000568586 DEFB106AQ8N104 65 aa30.49■■■□□ 2.47
RAB40C-211ENST00000568586 TMEM35BQ8NCS4 154 aa30.49■■■□□ 2.47
RAB40C-211ENST00000568586 FIBINQ8TAL6 211 aa30.49■■■□□ 2.47
RAB40C-211ENST00000568586 MYEOVQ96EZ4 313 aa30.49■■■□□ 2.47
RAB40C-211ENST00000568586 BTN2A3PQ96KV6 586 aa30.49■■■□□ 2.47
RAB40C-211ENST00000568586 NUCKS1Q9H1E3 243 aaKnown RBP30.49■■■□□ 2.47
RAB40C-211ENST00000568586 ABCB8Q9NUT2 735 aa30.49■■■□□ 2.47
RAB40C-211ENST00000568586 CDV3Q9UKY7 258 aaKnown RBP30.49■■■□□ 2.47
RAB40C-211ENST00000568586 SIK3Q9Y2K2 1263 aa30.49■■■□□ 2.47
RAB40C-211ENST00000568586 KCNU1A8MYU2 1149 aa30.48■■■□□ 2.47
RAB40C-211ENST00000568586 TBL1XO60907 577 aa30.48■■■□□ 2.47
RAB40C-211ENST00000568586 TPM2P07951 284 aa30.48■■■□□ 2.47
RAB40C-211ENST00000568586 PABPC1P11940 636 aaKnown RBP30.48■■■□□ 2.47
RAB40C-211ENST00000568586 LIMK1P53667 647 aa30.48■■■□□ 2.47
RAB40C-211ENST00000568586 CDK17Q00537 523 aa30.48■■■□□ 2.47
RAB40C-211ENST00000568586 SLC6A3Q01959 620 aa30.48■■■□□ 2.47
RAB40C-211ENST00000568586 STARD3Q14849 445 aa30.48■■■□□ 2.47
RAB40C-211ENST00000568586 SF3A2Q15428 464 aaKnown RBP30.48■■■□□ 2.47
RAB40C-211ENST00000568586 FUT11Q495W5 492 aa30.48■■■□□ 2.47
RAB40C-211ENST00000568586 LPCAT2Q7L5N7 544 aa30.48■■■□□ 2.47
RAB40C-211ENST00000568586 AHI1Q8N157 1196 aa30.48■■■□□ 2.47
RAB40C-211ENST00000568586 WFDC5Q8TCV5 224 aa30.48■■■□□ 2.47
RAB40C-211ENST00000568586 RTKNQ9BST9 563 aa30.48■■■□□ 2.47
RAB40C-211ENST00000568586 CIPCQ9C0C6 399 aa30.48■■■□□ 2.47
RAB40C-211ENST00000568586 HSD3B7Q9H2F3 369 aa30.48■■■□□ 2.47
RAB40C-211ENST00000568586 GGA2Q9UJY4 613 aa30.48■■■□□ 2.47
RAB40C-211ENST00000568586 THADAQ6YHU6 1953 aa30.48■■■□□ 2.47
RAB40C-211ENST00000568586 SLC30A4O14863 429 aa30.47■■■□□ 2.47
RAB40C-211ENST00000568586 LSM8O95777 96 aaKnown RBP30.47■■■□□ 2.47
RAB40C-211ENST00000568586 CAVIN2O95810 425 aa30.47■■■□□ 2.47
RAB40C-211ENST00000568586 APOEP02649 317 aa30.47■■■□□ 2.47
RAB40C-211ENST00000568586 SLC2A3P11169 496 aa30.47■■■□□ 2.47
RAB40C-211ENST00000568586 SCNN1AP37088 669 aa30.47■■■□□ 2.47
RAB40C-211ENST00000568586 COPB1P53618 953 aaKnown RBP30.47■■■□□ 2.47
RAB40C-211ENST00000568586 CREB5Q02930 508 aa30.47■■■□□ 2.47
RAB40C-211ENST00000568586 CCDC6Q16204 474 aa30.47■■■□□ 2.47
RAB40C-211ENST00000568586 SLC36A4Q6YBV0 504 aa30.47■■■□□ 2.47
RAB40C-211ENST00000568586 EPS8L1Q8TE68 723 aa30.47■■■□□ 2.47
RAB40C-211ENST00000568586 SORCS1Q8WY21 1168 aa30.47■■■□□ 2.47
RAB40C-211ENST00000568586 TMEM245Q9H330 911 aa30.47■■■□□ 2.47
RAB40C-211ENST00000568586 TMEM63CQ9P1W3 806 aa30.47■■■□□ 2.47
RAB40C-211ENST00000568586 XPO7Q9UIA9 1087 aaKnown RBP30.47■■■□□ 2.47
RAB40C-211ENST00000568586 LOC105378220A0A1B0GUY1 285 aaPredicted RBP30.46■■■□□ 2.47
RAB40C-211ENST00000568586 GDF9O60383 454 aa30.46■■■□□ 2.47
RAB40C-211ENST00000568586 JAM2P57087 298 aa30.46■■■□□ 2.47
RAB40C-211ENST00000568586 RPS24P62847 133 aaKnown RBP30.46■■■□□ 2.47
RAB40C-211ENST00000568586 FKBP15Q5T1M5 1219 aa30.46■■■□□ 2.47
RAB40C-211ENST00000568586 OR6B2Q6IFH4 312 aa30.46■■■□□ 2.47
RAB40C-211ENST00000568586 CHST9Q7L1S5 443 aa30.46■■■□□ 2.47
RAB40C-211ENST00000568586 APTXQ7Z2E3 356 aaKnown RBP30.46■■■□□ 2.47
RAB40C-211ENST00000568586 DGLUCYQ7Z3D6 616 aa30.46■■■□□ 2.47
RAB40C-211ENST00000568586 NOP9Q86U38 636 aaKnown RBP30.46■■■□□ 2.47
RAB40C-211ENST00000568586 IGHV1OR15-9A0A0B4J2B8 117 aa30.45■■■□□ 2.47
RAB40C-211ENST00000568586 MAP3K13O43283 966 aa30.45■■■□□ 2.47
RAB40C-211ENST00000568586 DAB1O75553 588 aa30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms