RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 BAG6P46379 1132 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 NAGLUP54802 743 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 NAA20P61599 178 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 RFWD3Q6PCD5 774 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 ATG16L2Q8NAA4 619 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 SLITRK1Q96PX8 696 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 DEPDC7Q96QD5 511 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 UBE2OQ9C0C9 1292 aaKnown RBP12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 LRRC4CQ9HCJ2 640 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 USE1Q9NZ43 259 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 GOLGA8TH3BQL2 631 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 NOL4O94818 638 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 ZNF682O95780 498 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 JCHAINP01591 159 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 CAPN1P07384 714 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 VIL1P09327 827 aaKnown RBP12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 RBP1P09455 135 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 RPL14P50914 215 aaKnown RBP12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 XIAPP98170 497 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 FAM98BQ52LJ0 330 aaKnown RBP12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 GRTP1Q5TC63 336 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 APTXQ7Z2E3 356 aaKnown RBP12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 ACOT1Q86TX2 421 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 SIX5Q8N196 739 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 SEPT1Q8WYJ6 367 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 ASIC4Q96FT7 647 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 DRG1Q9Y295 367 aaKnown RBP12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 PDZK1P1A8MUH7 402 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 ANXA9O76027 345 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 VDRP11473 427 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 MYL4P12829 197 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 NCAM1P13591 858 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 FECHP22830 423 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 CCR3P51677 355 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 LSM3P62310 102 aaKnown RBP12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 KYAT1Q16773 422 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 ZIK1Q3SY52 487 aaPredicted RBP12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 SLC10A4Q96EP9 437 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 ZNF570Q96NI8 536 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 SLC25A23Q9BV35 468 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 PNPLA3Q9NST1 481 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 CACNA2D2Q9NY47 1150 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 ZNF197O14709 1029 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 LSM1O15116 133 aaKnown RBP12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 MAGEB2O15479 319 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 MIPP30301 263 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 LRPAP1P30533 357 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 PLK1P53350 603 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 FMO1Q01740 532 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 PWP1Q13610 501 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 CNPY1Q3B7I2 92 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 TLK2Q86UE8 772 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 FIG4Q92562 907 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 HAS1Q92839 578 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 DCUN1D1Q96GG9 259 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 TMEM109Q9BVC6 243 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 SLC4A5Q9BY07 1137 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 HPS4Q9NQG7 708 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 HS6ST1O60243 411 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 FDX1P10109 184 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 RARRES1P49788 294 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 AMHR2Q16671 573 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 HPS6Q86YV9 775 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 LRRC57Q8N9N7 239 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 RCN3Q96D15 328 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 APOL5Q9BWW9 433 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 RAD21L1Q9H4I0 556 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 GPBP1L1Q9HC44 474 aaPredicted RBP12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 RBMX2Q9Y388 322 aaKnown RBP12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 CD163L1Q9NR16 1453 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 RGSL1A5PLK6 1076 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 PGK2P07205 417 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 PSME3P61289 254 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 PTPN11Q06124 597 aaPredicted RBP12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 SATL1Q86VE3 508 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 SP8Q8IXZ3 490 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 TIMMDC1Q9NPL8 285 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 XPNPEP3Q9NQH7 507 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 ABCB10Q9NRK6 738 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 DDIT4Q9NX09 232 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 RNF112Q9ULX5 631 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 VIRMAQ69YN4 1812 aaKnown RBP12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 ITSN1Q15811 1721 aa12.69□□□□□ -0.38
CSPG4P13-202ENST00000567704 TMEM150BA6NC51 233 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 C5orf58C9J3I9 102 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 FAM20BO75063 409 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 CNOT3O75175 753 aaKnown RBP12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 ERVK-10P10266 1014 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 ETFBP38117 255 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 BLVRAP53004 296 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 MAMLD1Q13495 774 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 TTLL4Q14679 1199 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 EML3Q32P44 896 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 BORCS5Q969J3 196 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 PHF21AQ96BD5 680 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 DCPSQ96C86 337 aaKnown RBP12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 DNAJC1Q96KC8 554 aaKnown RBP12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 PPP1R10Q96QC0 940 aaKnown RBP12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 CLK4Q9HAZ1 481 aaKnown RBP12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 PSMD13Q9UNM6 376 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms