RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 NFKBIBQ15653 356 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 TCP11X2Q5H9J9 407 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 EFHC1Q5JVL4 640 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 PIK3R6Q5UE93 754 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 KIAA1211LQ6NV74 962 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 DPY19L2P1Q6NXN4 242 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 RFWD3Q6PCD5 774 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 CYP2U1Q7Z449 544 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 ANKS1BQ7Z6G8 1248 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 SLC47A2Q86VL8 602 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 TMEFF1Q8IYR6 380 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 FAM71AQ8IYT1 594 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 WDTC1Q8N5D0 677 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 FRMD1Q8N878 549 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 ENOX1Q8TC92 643 aaKnown RBP7.19□□□□□ -1.26
SF3B3-209ENST00000567635 GPT2Q8TD30 523 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 DQX1Q8TE96 717 aaKnown RBP7.19□□□□□ -1.26
SF3B3-209ENST00000567635 ERLEC1Q96DZ1 483 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 PPP1R13BQ96KQ4 1090 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 FCRL2Q96LA5 508 aaPredicted RBP7.19□□□□□ -1.26
SF3B3-209ENST00000567635 SERPINB11Q96P15 392 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 CIPCQ9C0C6 399 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 SMOC1Q9H4F8 434 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 POPDC2Q9HBU9 364 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 CD248Q9HCU0 757 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 SLC12A6Q9UHW9 1150 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 DCHS1Q96JQ0 3298 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 KNTC1P50748 2209 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 KHNYNO15037 678 aaKnown RBP7.18□□□□□ -1.26
SF3B3-209ENST00000567635 AP5Z1O43299 807 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 SYNCRIPO60506 623 aaKnown RBP7.18□□□□□ -1.26
SF3B3-209ENST00000567635 NDUFS2O75306 463 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 TRUB2O95900 331 aaKnown RBP7.18□□□□□ -1.26
SF3B3-209ENST00000567635 TPM2P07951 284 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 GLI1P08151 1106 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 SLC2A3P11169 496 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 NDUFV2P19404 249 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 HLA-FP30511 346 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 SLC6A4P31645 630 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 DPP6P42658 865 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 IL12RB1P42701 662 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 IRX4P78413 519 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 CDK17Q00537 523 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 KCNMA1Q12791 1236 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 PDCLQ13371 301 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 ZNF234Q14588 700 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 STARD3Q14849 445 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 TAF5Q15542 800 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 FUT11Q495W5 492 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 DCAF6Q58WW2 860 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 FAM133BQ5BKY9 247 aaKnown RBP7.18□□□□□ -1.26
SF3B3-209ENST00000567635 STPG1Q5TH74 334 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 KLHDC7AQ5VTJ3 777 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 TMEM215Q68D42 235 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 IL31Q6EBC2 164 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 NADSYN1Q6IA69 706 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 SASS6Q6UVJ0 657 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 KIAA1324Q6UXG2 1013 aaKnown RBP7.18□□□□□ -1.26
SF3B3-209ENST00000567635 C11orf57Q6ZUT1 292 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-209ENST00000567635 CHST9Q7L1S5 443 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 KIAA0907Q7Z7F0 614 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-209ENST00000567635 METTL3Q86U44 580 aaKnown RBP7.18□□□□□ -1.26
SF3B3-209ENST00000567635 PASD1Q8IV76 773 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 CCDC117Q8IWD4 279 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-209ENST00000567635 ATP6V0D2Q8N8Y2 350 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 ZNF557Q8N988 423 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-209ENST00000567635 HJURPQ8NCD3 748 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-209ENST00000567635 FIBINQ8TAL6 211 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 ADAM32Q8TC27 787 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 WFIKKN2Q8TEU8 576 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 SORCS1Q8WY21 1168 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 DDX1Q92499 740 aaKnown RBP7.18□□□□□ -1.26
SF3B3-209ENST00000567635 PIGKQ92643 395 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 SLC39A13Q96H72 371 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 MRGPRX1Q96LB2 322 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 NOX5Q96PH1 765 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 CPXM1Q96SM3 734 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 STK33Q9BYT3 514 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 PRDM16Q9HAZ2 1276 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 ITM2CQ9NQX7 267 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 ABCB8Q9NUT2 735 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.18□□□□□ -1.26
SF3B3-209ENST00000567635 ASNSD1Q9NWL6 643 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 CALCOCO1Q9P1Z2 691 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 STIM2Q9P246 746 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 GGA2Q9UJY4 613 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 AJAP1Q9UKB5 411 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-209ENST00000567635 NFE2L3Q9Y4A8 694 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 CEP83Q9Y592 693 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 RAD54BQ9Y620 910 aa7.18□□□□□ -1.26
SF3B3-209ENST00000567635 IGHV1OR15-9A0A0B4J2B8 117 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 MED19A0JLT2 244 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-209ENST00000567635 TYW5A2RUC4 315 aaKnown RBP7.17□□□□□ -1.26
SF3B3-209ENST00000567635 TM4SF5O14894 197 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 APOEP02649 317 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 ATP5BP06576 529 aaKnown RBP7.17□□□□□ -1.26
SF3B3-209ENST00000567635 EPHX1P07099 455 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 PABPC1P11940 636 aaKnown RBP7.17□□□□□ -1.26
SF3B3-209ENST00000567635 UCHL3P15374 230 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 POLR2EP19388 210 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms