RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 CNGB3Q9NQW8 809 aa17.23■□□□□ 0.35
TSR3-202ENST00000566296 ABCC13Q9NSE7 274 aa17.23■□□□□ 0.35
TSR3-202ENST00000566296 LMBRD1Q9NUN5 540 aa17.23■□□□□ 0.35
TSR3-202ENST00000566296 SFMBT1Q9UHJ3 866 aa17.23■□□□□ 0.35
TSR3-202ENST00000566296 PCOLCE2Q9UKZ9 415 aa17.23■□□□□ 0.35
TSR3-202ENST00000566296 PLA2G4CQ9UP65 541 aa17.23■□□□□ 0.35
TSR3-202ENST00000566296 VDRP11473 427 aa17.22■□□□□ 0.35
TSR3-202ENST00000566296 PABPC1P11940 636 aaKnown RBP17.22■□□□□ 0.35
TSR3-202ENST00000566296 TBXAS1P24557 533 aaPredicted RBP17.22■□□□□ 0.35
TSR3-202ENST00000566296 CAMK2GQ13555 558 aaPredicted RBP17.22■□□□□ 0.35
TSR3-202ENST00000566296 TEAD4Q15561 434 aa17.22■□□□□ 0.35
TSR3-202ENST00000566296 TTC31Q49AM3 519 aaPredicted RBP17.22■□□□□ 0.35
TSR3-202ENST00000566296 ADGRF1Q5T601 910 aa17.22■□□□□ 0.35
TSR3-202ENST00000566296 GLRX5Q86SX6 157 aa17.22■□□□□ 0.35
TSR3-202ENST00000566296 ZNF557Q8N988 423 aaPredicted RBP17.22■□□□□ 0.35
TSR3-202ENST00000566296 CYB5D2Q8WUJ1 264 aa17.22■□□□□ 0.35
TSR3-202ENST00000566296 TMA16Q96EY4 203 aaKnown RBP17.22■□□□□ 0.35
TSR3-202ENST00000566296 TM7SF3Q9NS93 570 aa17.22■□□□□ 0.35
TSR3-202ENST00000566296 ABCB8Q9NUT2 735 aa17.22■□□□□ 0.35
TSR3-202ENST00000566296 GGA2Q9UJY4 613 aa17.22■□□□□ 0.35
TSR3-202ENST00000566296 STOML2Q9UJZ1 356 aa17.22■□□□□ 0.35
TSR3-202ENST00000566296 LHX6Q9UPM6 363 aa17.22■□□□□ 0.35
TSR3-202ENST00000566296 FNDC3AQ9Y2H6 1198 aaKnown RBP17.22■□□□□ 0.35
TSR3-202ENST00000566296 COQ4Q9Y3A0 265 aa17.22■□□□□ 0.35
TSR3-202ENST00000566296 ANKRD11Q6UB99 2663 aaPredicted RBP17.21■□□□□ 0.35
TSR3-202ENST00000566296 YJEFN3A6XGL0 299 aa17.21■□□□□ 0.35
TSR3-202ENST00000566296 E7ENQ6 273 aa17.21■□□□□ 0.35
TSR3-202ENST00000566296 O00370 1275 aa17.21■□□□□ 0.35
TSR3-202ENST00000566296 FLRT2O43155 660 aa17.21■□□□□ 0.35
TSR3-202ENST00000566296 MSI1O43347 362 aaKnown RBP17.21■□□□□ 0.35
TSR3-202ENST00000566296 PTMSP20962 102 aa17.21■□□□□ 0.35
TSR3-202ENST00000566296 FKBP3Q00688 224 aaKnown RBP17.21■□□□□ 0.35
TSR3-202ENST00000566296 SCAPQ12770 1279 aa17.21■□□□□ 0.35
TSR3-202ENST00000566296 HLA-BQ31612 363 aa17.21■□□□□ 0.35
TSR3-202ENST00000566296 PROSER1Q86XN7 944 aa17.21■□□□□ 0.35
TSR3-202ENST00000566296 ZNF366Q8N895 744 aa17.21■□□□□ 0.35
TSR3-202ENST00000566296 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.21■□□□□ 0.35
TSR3-202ENST00000566296 PNPLA1Q8N8W4 532 aa17.21■□□□□ 0.35
TSR3-202ENST00000566296 UBA3Q8TBC4 463 aa17.21■□□□□ 0.35
TSR3-202ENST00000566296 KCTD13Q8WZ19 329 aa17.21■□□□□ 0.35
TSR3-202ENST00000566296 GOLGA1Q92805 767 aa17.21■□□□□ 0.35
TSR3-202ENST00000566296 BTBD1Q9H0C5 482 aa17.21■□□□□ 0.35
TSR3-202ENST00000566296 IL21RQ9HBE5 538 aa17.21■□□□□ 0.35
TSR3-202ENST00000566296 ARMCX3Q9UH62 379 aaPredicted RBP17.21■□□□□ 0.35
TSR3-202ENST00000566296 PCDHGB2Q9Y5G2 931 aa17.21■□□□□ 0.35
TSR3-202ENST00000566296 A0A1B0GVT2 93 aa17.2■□□□□ 0.34
TSR3-202ENST00000566296 TYW5A2RUC4 315 aaKnown RBP17.2■□□□□ 0.34
TSR3-202ENST00000566296 CBFA2T3O75081 653 aa17.2■□□□□ 0.34
TSR3-202ENST00000566296 SEMA4FO95754 770 aa17.2■□□□□ 0.34
TSR3-202ENST00000566296 DNTTP04053 509 aa17.2■□□□□ 0.34
TSR3-202ENST00000566296 ATP5BP06576 529 aaKnown RBP17.2■□□□□ 0.34
TSR3-202ENST00000566296 LCP1P13796 627 aa17.2■□□□□ 0.34
TSR3-202ENST00000566296 PRCPP42785 496 aa17.2■□□□□ 0.34
TSR3-202ENST00000566296 AFF3P51826 1226 aaKnown RBP17.2■□□□□ 0.34
TSR3-202ENST00000566296 DAOAP59103 153 aa17.2■□□□□ 0.34
TSR3-202ENST00000566296 ZBTB16Q05516 673 aa17.2■□□□□ 0.34
TSR3-202ENST00000566296 RING1Q06587 406 aa17.2■□□□□ 0.34
TSR3-202ENST00000566296 LRMPQ12912 555 aa17.2■□□□□ 0.34
TSR3-202ENST00000566296 PNOCQ13519 176 aa17.2■□□□□ 0.34
TSR3-202ENST00000566296 SUZ12Q15022 739 aaKnown RBP17.2■□□□□ 0.34
TSR3-202ENST00000566296 NUGGCQ68CJ6 796 aa17.2■□□□□ 0.34
TSR3-202ENST00000566296 MBLAC2Q68D91 279 aa17.2■□□□□ 0.34
TSR3-202ENST00000566296 MSANTD2Q6P1R3 559 aa17.2■□□□□ 0.34
TSR3-202ENST00000566296 UNC45BQ8IWX7 931 aa17.2■□□□□ 0.34
TSR3-202ENST00000566296 SCML4Q8N228 414 aa17.2■□□□□ 0.34
TSR3-202ENST00000566296 CDC6Q99741 560 aa17.2■□□□□ 0.34
TSR3-202ENST00000566296 IRX2Q9BZI1 471 aaPredicted RBP17.2■□□□□ 0.34
TSR3-202ENST00000566296 TMEM245Q9H330 911 aa17.2■□□□□ 0.34
TSR3-202ENST00000566296 C6orf106Q9H6K1 298 aaPredicted RBP17.2■□□□□ 0.34
TSR3-202ENST00000566296 KIAA1257Q9ULG3 409 aa17.2■□□□□ 0.34
TSR3-202ENST00000566296 APC2O95996 2303 aa17.2■□□□□ 0.34
TSR3-202ENST00000566296 GOLGA4Q13439 2230 aaKnown RBP17.2■□□□□ 0.34
TSR3-202ENST00000566296 DLDP09622 509 aaKnown RBP17.19■□□□□ 0.34
TSR3-202ENST00000566296 POLR2EP19388 210 aaKnown RBP17.19■□□□□ 0.34
TSR3-202ENST00000566296 SLC11A2P49281 568 aa17.19■□□□□ 0.34
TSR3-202ENST00000566296 RGS7P49802 495 aa17.19■□□□□ 0.34
TSR3-202ENST00000566296 BNC1Q01954 994 aa17.19■□□□□ 0.34
TSR3-202ENST00000566296 LRRC63Q05C16 580 aa17.19■□□□□ 0.34
TSR3-202ENST00000566296 COBLL1Q53SF7 1204 aa17.19■□□□□ 0.34
TSR3-202ENST00000566296 ZNF658Q5TYW1 1059 aaPredicted RBP17.19■□□□□ 0.34
TSR3-202ENST00000566296 ZNF776Q68DI1 518 aaPredicted RBP17.19■□□□□ 0.34
TSR3-202ENST00000566296 TMEM270Q6UE05 265 aa17.19■□□□□ 0.34
TSR3-202ENST00000566296 CCNI2Q6ZMN8 369 aaPredicted RBP17.19■□□□□ 0.34
TSR3-202ENST00000566296 ADIPOR2Q86V24 386 aa17.19■□□□□ 0.34
TSR3-202ENST00000566296 ZC3H3Q8IXZ2 948 aaKnown RBP17.19■□□□□ 0.34
TSR3-202ENST00000566296 FMR1NBQ8N0W7 255 aaPredicted RBP17.19■□□□□ 0.34
TSR3-202ENST00000566296 ENGASEQ8NFI3 743 aa17.19■□□□□ 0.34
TSR3-202ENST00000566296 IRGQQ8WZA9 623 aa17.19■□□□□ 0.34
TSR3-202ENST00000566296 NT5C1BQ96P26 610 aa17.19■□□□□ 0.34
TSR3-202ENST00000566296 SUN2Q9UH99 717 aa17.19■□□□□ 0.34
TSR3-202ENST00000566296 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.19■□□□□ 0.34
TSR3-202ENST00000566296 TMEM131Q92545 1883 aa17.18■□□□□ 0.34
TSR3-202ENST00000566296 PLXNB3Q9ULL4 1909 aa17.18■□□□□ 0.34
TSR3-202ENST00000566296 M0QYV0 167 aa17.18■□□□□ 0.34
TSR3-202ENST00000566296 IRAK2O43187 625 aa17.18■□□□□ 0.34
TSR3-202ENST00000566296 TBL1XO60907 577 aa17.18■□□□□ 0.34
TSR3-202ENST00000566296 SMC2O95347 1197 aa17.18■□□□□ 0.34
TSR3-202ENST00000566296 PAEPP09466 180 aa17.18■□□□□ 0.34
TSR3-202ENST00000566296 ACSL1P33121 698 aa17.18■□□□□ 0.34
TSR3-202ENST00000566296 GRIA4P48058 902 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms