RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 BSNDQ8WZ55 320 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 RGMAQ96B86 450 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 ITPKCQ96DU7 683 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 EDEM2Q9BV94 578 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 GBP3Q9H0R5 595 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 C6orf50Q9HD87 102 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 RWDD2AQ9UIY3 292 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 TRAV34A0A0B4J273 112 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 PSMC4P43686 418 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 NUDT13Q86X67 352 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 FIBCD1Q8N539 461 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 USP38Q8NB14 1042 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 TBCKQ8TEA7 893 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 CCDC12Q8WUD4 166 aaPredicted RBP11.1□□□□□ -0.63
UBFD1-205ENST00000566136 BICD1Q96G01 975 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 CTAGE1Q96RT6 745 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 LACRTQ9GZZ8 138 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 MRPL44Q9H9J2 332 aaKnown RBP11.1□□□□□ -0.63
UBFD1-205ENST00000566136 USP40Q9NVE5 1235 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 RMND1Q9NWS8 449 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 MTMR4Q9NYA4 1195 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 PCDHA3Q9Y5H8 950 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.1□□□□□ -0.63
UBFD1-205ENST00000566136 KCNJ18B7U540 433 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 WNT10BO00744 389 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 GGPS1O95749 300 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 GYPCP04921 128 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 COPB1P53618 953 aaKnown RBP11.09□□□□□ -0.63
UBFD1-205ENST00000566136 GNG11P61952 73 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 HTD2P86397 168 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 KCNJ12Q14500 433 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 HIF1AQ16665 826 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 ERCC6LQ2NKX8 1250 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 PREPLQ4J6C6 727 aaPredicted RBP11.09□□□□□ -0.63
UBFD1-205ENST00000566136 DCAF17Q5H9S7 520 aaPredicted RBP11.09□□□□□ -0.63
UBFD1-205ENST00000566136 RNFT1Q5M7Z0 435 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 UNQ6494/PRO21346Q6UXR6 183 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 RAD9BQ6WBX8 426 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 NEK8Q86SG6 692 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 PRPF39Q86UA1 669 aaKnown RBP11.09□□□□□ -0.63
UBFD1-205ENST00000566136 CABP7Q86V35 215 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 TNIP2Q8NFZ5 429 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 SUN5Q8TC36 379 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 NOC3LQ8WTT2 800 aaKnown RBP11.09□□□□□ -0.63
UBFD1-205ENST00000566136 EEF2KMTQ96G04 330 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 VRK1Q99986 396 aaPredicted RBP11.09□□□□□ -0.63
UBFD1-205ENST00000566136 ACE2Q9BYF1 805 aaPredicted RBP11.09□□□□□ -0.63
UBFD1-205ENST00000566136 ZFYVE1Q9HBF4 777 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 SAYSD1Q9NPB0 183 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 CATSPERZQ9NTU4 200 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 PHLPP2Q6ZVD8 1323 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 RNF225M0QZC1 329 aaPredicted RBP11.09□□□□□ -0.63
UBFD1-205ENST00000566136 KLRC4O43908 158 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 PRR35P0CG20 571 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 HLA-DPA1P20036 260 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 GNA11P29992 359 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 LSP1P33241 339 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 GABPAQ06546 454 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 NOGQ13253 232 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 TCP11X2Q5H9J9 407 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 PPM1JQ5JR12 505 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 MOB2Q70IA6 237 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 CPT1CQ8TCG5 803 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 TBC1D5Q92609 795 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 MIEF2Q96C03 454 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 KTI12Q96EK9 354 aaPredicted RBP11.09□□□□□ -0.63
UBFD1-205ENST00000566136 GDAP1L1Q96MZ0 367 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 IRX2Q9BZI1 471 aaPredicted RBP11.09□□□□□ -0.63
UBFD1-205ENST00000566136 CCSER1Q9C0I3 900 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 CCDC86Q9H6F5 360 aaKnown RBP11.09□□□□□ -0.63
UBFD1-205ENST00000566136 LIMA1Q9UHB6 759 aaKnown RBP11.09□□□□□ -0.63
UBFD1-205ENST00000566136 PCDHAC2Q9Y5I4 1007 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 MYH8P13535 1937 aa11.09□□□□□ -0.63
UBFD1-205ENST00000566136 FOCADQ5VW36 1801 aa11.08□□□□□ -0.63
UBFD1-205ENST00000566136 MYO3BQ8WXR4 1341 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 A0A1W2PNR3 127 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 VEGFDO43915 354 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 MFAP3LO75121 409 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 GBP1P32455 592 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 NFIAQ12857 509 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 PDCLQ13371 301 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 FDX2Q6P4F2 183 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 ADSSL1Q8N142 457 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 FRMD1Q8N878 549 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 PANX2Q96RD6 677 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 ATP6V0BQ99437 205 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 REXO4Q9GZR2 422 aaKnown RBP11.08□□□□□ -0.64
UBFD1-205ENST00000566136 C1orf21Q9H246 121 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 LZTFL1Q9NQ48 299 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 DTNAQ9Y4J8 743 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 PITPNM2Q9BZ72 1349 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 OLFM2O95897 454 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 SUPT20HL2P0C7V6 817 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 SLC16A2P36021 539 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 TXKP42681 527 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 CPA2P48052 419 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 RPS3AP61247 264 aaKnown RBP11.08□□□□□ -0.64
UBFD1-205ENST00000566136 BTBD16Q32M84 506 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 SUPT20HL1Q3ZLR7 823 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 PRAMEF14Q5SWL7 426 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms