RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 IRX2Q9BZI1 471 aaPredicted RBP13.1□□□□□ -0.31
SF3B3-206ENST00000565990 LINC00597Q9H2U6 94 aa13.1□□□□□ -0.31
SF3B3-206ENST00000565990 WDCPQ9H6R7 721 aa13.1□□□□□ -0.31
SF3B3-206ENST00000565990 VIPAS39Q9H9C1 493 aa13.1□□□□□ -0.31
SF3B3-206ENST00000565990 TRPV5Q9NQA5 729 aa13.1□□□□□ -0.31
SF3B3-206ENST00000565990 CFAP97Q9P2B7 532 aa13.1□□□□□ -0.31
SF3B3-206ENST00000565990 TBC1D14Q9P2M4 693 aa13.1□□□□□ -0.31
SF3B3-206ENST00000565990 ANAPC7Q9UJX3 599 aa13.1□□□□□ -0.31
SF3B3-206ENST00000565990 AGO1Q9UL18 857 aaKnown RBP13.1□□□□□ -0.31
SF3B3-206ENST00000565990 A0A0U1RQJ8 604 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 ARNTLO00327 626 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 GFRA2O00451 464 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 CHADO15335 359 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 RNF8O76064 485 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 PROSCO94903 275 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 PRLRP16471 622 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 SP100P23497 879 aaPredicted RBP13.09□□□□□ -0.31
SF3B3-206ENST00000565990 PSMA2P25787 234 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 MAN1A1P33908 653 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 ADRA1BP35368 520 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 HARS2P49590 506 aaKnown RBP13.09□□□□□ -0.31
SF3B3-206ENST00000565990 ATXN1P54253 815 aaKnown RBP13.09□□□□□ -0.31
SF3B3-206ENST00000565990 AIF1P55008 147 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 MLLT6P55198 1093 aaPredicted RBP13.09□□□□□ -0.31
SF3B3-206ENST00000565990 KIF5AQ12840 1032 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 NME3Q13232 169 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 LONRF2Q1L5Z9 754 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 ADGRF1Q5T601 910 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 ACBD5Q5T8D3 534 aaPredicted RBP13.09□□□□□ -0.31
SF3B3-206ENST00000565990 SND1Q7KZF4 910 aaKnown RBP eCLIP13.09□□□□□ -0.316e-13■■□□□ 11.7
SF3B3-206ENST00000565990 KIAA1328Q86T90 577 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.09□□□□□ -0.31
SF3B3-206ENST00000565990 OSCP1Q8WVF1 389 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 ATRIPQ8WXE1 791 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 RSAD2Q8WXG1 361 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 BTBD6Q96KE9 485 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 BTN2A3PQ96KV6 586 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 HAPLN3Q96S86 360 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 KXD1Q9BQD3 176 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 TRMT61BQ9BVS5 477 aaKnown RBP13.09□□□□□ -0.31
SF3B3-206ENST00000565990 FUT8Q9BYC5 575 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 FAM204AQ9H8W3 233 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 LZTFL1Q9NQ48 299 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 ANLNQ9NQW6 1124 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 THG1LQ9NWX6 298 aaKnown RBP13.09□□□□□ -0.31
SF3B3-206ENST00000565990 SH3BP1Q9Y3L3 701 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 DOCK4Q8N1I0 1966 aa13.09□□□□□ -0.31
SF3B3-206ENST00000565990 SLC9A3R1O14745 358 aaPredicted RBP13.08□□□□□ -0.32
SF3B3-206ENST00000565990 ACSL4O60488 711 aa13.08□□□□□ -0.32
SF3B3-206ENST00000565990 HMBSP08397 361 aa13.08□□□□□ -0.32
SF3B3-206ENST00000565990 CORO1AP31146 461 aaKnown RBP13.08□□□□□ -0.32
SF3B3-206ENST00000565990 SCAPQ12770 1279 aa13.08□□□□□ -0.32
SF3B3-206ENST00000565990 TDGQ13569 410 aa13.08□□□□□ -0.32
SF3B3-206ENST00000565990 PDGFRLQ15198 375 aa13.08□□□□□ -0.32
SF3B3-206ENST00000565990 C5orf22Q49AR2 442 aa13.08□□□□□ -0.32
SF3B3-206ENST00000565990 TJAP1Q5JTD0 557 aa13.08□□□□□ -0.32
SF3B3-206ENST00000565990 ARTNQ5T4W7 220 aa13.08□□□□□ -0.32
SF3B3-206ENST00000565990 ZNF572Q7Z3I7 529 aaPredicted RBP13.08□□□□□ -0.32
SF3B3-206ENST00000565990 SLFN11Q7Z7L1 901 aa13.08□□□□□ -0.32
SF3B3-206ENST00000565990 DENND1CQ8IV53 801 aa13.08□□□□□ -0.32
SF3B3-206ENST00000565990 BBS7Q8IWZ6 715 aa13.08□□□□□ -0.32
SF3B3-206ENST00000565990 CPXM2Q8N436 756 aa13.08□□□□□ -0.32
SF3B3-206ENST00000565990 ST13P5Q8NFI4 369 aaPredicted RBP13.08□□□□□ -0.32
SF3B3-206ENST00000565990 EXOC4Q96A65 974 aa13.08□□□□□ -0.32
SF3B3-206ENST00000565990 NTAN1Q96AB6 310 aa13.08□□□□□ -0.32
SF3B3-206ENST00000565990 PRMT1Q99873 361 aaKnown RBP13.08□□□□□ -0.32
SF3B3-206ENST00000565990 TKTL2Q9H0I9 626 aa13.08□□□□□ -0.32
SF3B3-206ENST00000565990 OSBPL2Q9H1P3 480 aa13.08□□□□□ -0.32
SF3B3-206ENST00000565990 SLC12A6Q9UHW9 1150 aa13.08□□□□□ -0.32
SF3B3-206ENST00000565990 LSM7Q9UK45 103 aaKnown RBP13.08□□□□□ -0.32
SF3B3-206ENST00000565990 BUB1BO60566 1050 aaPredicted RBP13.07□□□□□ -0.32
SF3B3-206ENST00000565990 LRCH4O75427 683 aa13.07□□□□□ -0.32
SF3B3-206ENST00000565990 DESP17661 470 aa13.07□□□□□ -0.32
SF3B3-206ENST00000565990 MIPP30301 263 aa13.07□□□□□ -0.32
SF3B3-206ENST00000565990 CHKAP35790 457 aa13.07□□□□□ -0.32
SF3B3-206ENST00000565990 SLC1A1P43005 524 aa13.07□□□□□ -0.32
SF3B3-206ENST00000565990 NOP2P46087 812 aaKnown RBP13.07□□□□□ -0.32
SF3B3-206ENST00000565990 SLC11A2P49281 568 aa13.07□□□□□ -0.32
SF3B3-206ENST00000565990 NRG1Q02297 640 aaPredicted RBP13.07□□□□□ -0.32
SF3B3-206ENST00000565990 MESDQ14696 234 aa13.07□□□□□ -0.32
SF3B3-206ENST00000565990 CDO1Q16878 200 aa13.07□□□□□ -0.32
SF3B3-206ENST00000565990 EML3Q32P44 896 aa13.07□□□□□ -0.32
SF3B3-206ENST00000565990 BOLA3Q53S33 107 aa13.07□□□□□ -0.32
SF3B3-206ENST00000565990 FAM133BQ5BKY9 247 aaKnown RBP13.07□□□□□ -0.32
SF3B3-206ENST00000565990 BEND6Q5SZJ8 279 aaPredicted RBP13.07□□□□□ -0.32
SF3B3-206ENST00000565990 NADSYN1Q6IA69 706 aa13.07□□□□□ -0.32
SF3B3-206ENST00000565990 RHBDF2Q6PJF5 856 aa13.07□□□□□ -0.32
SF3B3-206ENST00000565990 CYP4V2Q6ZWL3 525 aaPredicted RBP13.07□□□□□ -0.32
SF3B3-206ENST00000565990 RNF135Q8IUD6 432 aa13.07□□□□□ -0.32
SF3B3-206ENST00000565990 PSTKQ8IV42 348 aaKnown RBP13.07□□□□□ -0.32
SF3B3-206ENST00000565990 ATP6V0D2Q8N8Y2 350 aa13.07□□□□□ -0.32
SF3B3-206ENST00000565990 TPCN2Q8NHX9 752 aa13.07□□□□□ -0.32
SF3B3-206ENST00000565990 IRF7Q92985 503 aa13.07□□□□□ -0.32
SF3B3-206ENST00000565990 CD320Q9NPF0 282 aa13.07□□□□□ -0.32
SF3B3-206ENST00000565990 MED4Q9NPJ6 270 aa13.07□□□□□ -0.32
SF3B3-206ENST00000565990 SLC2A4RGQ9NR83 387 aa13.07□□□□□ -0.32
SF3B3-206ENST00000565990 DUS2Q9NX74 493 aaKnown RBP13.07□□□□□ -0.32
SF3B3-206ENST00000565990 XPO7Q9UIA9 1087 aaKnown RBP13.07□□□□□ -0.32
SF3B3-206ENST00000565990 ALG6Q9Y672 507 aa13.07□□□□□ -0.32
SF3B3-206ENST00000565990 COL4A2P08572 1712 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms