RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 ARHGEF4Q9NR80 690 aa19.39■□□□□ 0.69
COMMD4-213ENST00000565834 DNMT3BQ9UBC3 853 aaKnown RBP19.39■□□□□ 0.69
COMMD4-213ENST00000565834 XPO7Q9UIA9 1087 aaKnown RBP19.39■□□□□ 0.69
COMMD4-213ENST00000565834 NOTCH4Q99466 2003 aa19.38■□□□□ 0.69
COMMD4-213ENST00000565834 CCDC195A0A1B0GUA6 201 aa19.38■□□□□ 0.69
COMMD4-213ENST00000565834 TGM2P21980 687 aa19.38■□□□□ 0.69
COMMD4-213ENST00000565834 AMPD1P23109 780 aa19.38■□□□□ 0.69
COMMD4-213ENST00000565834 COILP38432 576 aaPredicted RBP19.38■□□□□ 0.69
COMMD4-213ENST00000565834 GGCXP38435 758 aa19.38■□□□□ 0.69
COMMD4-213ENST00000565834 RBM10P98175 930 aaKnown RBP19.38■□□□□ 0.69
COMMD4-213ENST00000565834 SNX1Q13596 522 aa19.38■□□□□ 0.69
COMMD4-213ENST00000565834 DPYSQ14117 519 aa19.38■□□□□ 0.69
COMMD4-213ENST00000565834 GLE1Q53GS7 698 aaKnown RBP19.38■□□□□ 0.69
COMMD4-213ENST00000565834 CCDC137Q6PK04 289 aaKnown RBP19.38■□□□□ 0.69
COMMD4-213ENST00000565834 FAM118BQ9BPY3 351 aa19.38■□□□□ 0.69
COMMD4-213ENST00000565834 FRMD8P1Q9BZ68 369 aaPredicted RBP19.38■□□□□ 0.69
COMMD4-213ENST00000565834 AMACRQ9UHK6 382 aa19.38■□□□□ 0.69
COMMD4-213ENST00000565834 HS3ST4Q9Y661 456 aa19.38■□□□□ 0.69
COMMD4-213ENST00000565834 LRIG2O94898 1065 aa19.37■□□□□ 0.69
COMMD4-213ENST00000565834 OLFM2O95897 454 aa19.37■□□□□ 0.69
COMMD4-213ENST00000565834 RHOP08100 348 aa19.37■□□□□ 0.69
COMMD4-213ENST00000565834 HDCP19113 662 aa19.37■□□□□ 0.69
COMMD4-213ENST00000565834 KCNQ1P51787 676 aa19.37■□□□□ 0.69
COMMD4-213ENST00000565834 OTUD4Q01804 1114 aaKnown RBP19.37■□□□□ 0.69
COMMD4-213ENST00000565834 ELF2Q15723 593 aa19.37■□□□□ 0.69
COMMD4-213ENST00000565834 PIK3R6Q5UE93 754 aa19.37■□□□□ 0.69
COMMD4-213ENST00000565834 TTC27Q6P3X3 843 aa19.37■□□□□ 0.69
COMMD4-213ENST00000565834 CCDC105Q8IYK2 499 aa19.37■□□□□ 0.69
COMMD4-213ENST00000565834 PLD5Q8N7P1 536 aa19.37■□□□□ 0.69
COMMD4-213ENST00000565834 ARL14EPQ8N8R7 260 aaPredicted RBP19.37■□□□□ 0.69
COMMD4-213ENST00000565834 MAB21L3Q8N8X9 362 aa19.37■□□□□ 0.69
COMMD4-213ENST00000565834 ACTL9Q8TC94 416 aa19.37■□□□□ 0.69
COMMD4-213ENST00000565834 P3H4Q92791 437 aa19.37■□□□□ 0.69
COMMD4-213ENST00000565834 ZNF707Q96C28 371 aaPredicted RBP19.37■□□□□ 0.69
COMMD4-213ENST00000565834 C1orf74Q96LT6 269 aa19.37■□□□□ 0.69
COMMD4-213ENST00000565834 SLC22A12Q96S37 553 aa19.37■□□□□ 0.69
COMMD4-213ENST00000565834 KLF16Q9BXK1 252 aaPredicted RBP19.37■□□□□ 0.69
COMMD4-213ENST00000565834 NSUN3Q9H649 340 aaKnown RBP19.37■□□□□ 0.69
COMMD4-213ENST00000565834 STIM2Q9P246 746 aa19.37■□□□□ 0.69
COMMD4-213ENST00000565834 SAE1Q9UBE0 346 aaPredicted RBP19.37■□□□□ 0.69
COMMD4-213ENST00000565834 PCYOX1Q9UHG3 505 aa19.37■□□□□ 0.69
COMMD4-213ENST00000565834 HELZP42694 1942 aaKnown RBP19.37■□□□□ 0.69
COMMD4-213ENST00000565834 RAD51CO43502 376 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 PECAM1P16284 738 aaPredicted RBP19.36■□□□□ 0.69
COMMD4-213ENST00000565834 GJA1P17302 382 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 PFKLP17858 780 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 HTR7P34969 479 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 CCR2P41597 374 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 HARS2P49590 506 aaKnown RBP19.36■□□□□ 0.69
COMMD4-213ENST00000565834 MLLT6P55198 1093 aaPredicted RBP19.36■□□□□ 0.69
COMMD4-213ENST00000565834 MRPS25P82663 173 aaKnown RBP19.36■□□□□ 0.69
COMMD4-213ENST00000565834 NRG1Q02297 640 aaPredicted RBP19.36■□□□□ 0.69
COMMD4-213ENST00000565834 DHX34Q14147 1143 aaKnown RBP19.36■□□□□ 0.69
COMMD4-213ENST00000565834 ACBD5Q5T8D3 534 aaPredicted RBP19.36■□□□□ 0.69
COMMD4-213ENST00000565834 C1orf228Q6PIY5 440 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 MAATS1Q7Z4T9 603 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 VN1R2Q8NFZ6 395 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 SHKBP1Q8TBC3 707 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 CYP2S1Q96SQ9 504 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 IGFLR1Q9H665 355 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 SFXN1Q9H9B4 322 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 DZANK1Q9NVP4 752 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 CLUHO75153 1309 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 TRAV19A0A0A6YYK7 116 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 A0A1W2PPC1 479 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 LIASO43766 372 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 STC2O76061 302 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 SRGAP2BP0DMP2 458 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 EPHB2P29323 1055 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 KCNJ1P48048 391 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 DR1Q01658 176 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 BYSLQ13895 437 aaKnown RBP19.36■□□□□ 0.69
COMMD4-213ENST00000565834 KCNC3Q14003 757 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 LRIT3Q3SXY7 679 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 ARHGAP15Q53QZ3 475 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 MS4A13Q5J8X5 152 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 MANEALQ5VSG8 457 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 NCBP2-AS2Q69YL0 99 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 RWDD4Q6NW29 188 aaKnown RBP19.36■□□□□ 0.69
COMMD4-213ENST00000565834 DRICH1Q6PGQ1 229 aaPredicted RBP19.36■□□□□ 0.69
COMMD4-213ENST00000565834 NPNTQ6UXI9 565 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 GPR161Q8N6U8 529 aaKnown RBP19.36■□□□□ 0.69
COMMD4-213ENST00000565834 SMG7Q92540 1137 aaKnown RBP19.36■□□□□ 0.69
COMMD4-213ENST00000565834 TBC1D31Q96DN5 1066 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 PIDD1Q9HB75 910 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 GKN1Q9NS71 199 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 ETNK2Q9NVF9 386 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 SMPD4Q9NXE4 827 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 DNPEPQ9ULA0 475 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 HEY1Q9Y5J3 304 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 DOCK4Q8N1I0 1966 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 CDH23Q9H251 3354 aa19.36■□□□□ 0.69
COMMD4-213ENST00000565834 E9PAM4 449 aa19.35■□□□□ 0.69
COMMD4-213ENST00000565834 MCF2LO15068 1137 aa19.35■□□□□ 0.69
COMMD4-213ENST00000565834 CKMP06732 381 aa19.35■□□□□ 0.69
COMMD4-213ENST00000565834 IRF1P10914 325 aa19.35■□□□□ 0.69
COMMD4-213ENST00000565834 ERCC2P18074 760 aa19.35■□□□□ 0.69
COMMD4-213ENST00000565834 DDX6P26196 483 aaKnown RBP eCLIP19.35■□□□□ 0.69
COMMD4-213ENST00000565834 NOMO1Q15155 1222 aa19.35■□□□□ 0.69
COMMD4-213ENST00000565834 GRASPQ7Z6J2 395 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms