RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 HSPA12BQ96MM6 686 aa20.67■□□□□ 0.9
CLN6-206ENST00000565471 CNTNAP3BQ96NU0 1288 aa20.67■□□□□ 0.9
CLN6-206ENST00000565471 DDX50Q9BQ39 737 aaKnown RBP20.67■□□□□ 0.9
CLN6-206ENST00000565471 CNTNAP3Q9BZ76 1288 aa20.67■□□□□ 0.9
CLN6-206ENST00000565471 ITM2CQ9NQX7 267 aa20.67■□□□□ 0.9
CLN6-206ENST00000565471 ABCB8Q9NUT2 735 aa20.67■□□□□ 0.9
CLN6-206ENST00000565471 APEX2Q9UBZ4 518 aa20.67■□□□□ 0.9
CLN6-206ENST00000565471 GGA2Q9UJY4 613 aa20.67■□□□□ 0.9
CLN6-206ENST00000565471 TLR6Q9Y2C9 796 aa20.67■□□□□ 0.9
CLN6-206ENST00000565471 PI4KAP42356 2102 aa20.66■□□□□ 0.9
CLN6-206ENST00000565471 THAP12O43422 761 aa20.66■□□□□ 0.9
CLN6-206ENST00000565471 IGLV3-19P01714 112 aa20.66■□□□□ 0.9
CLN6-206ENST00000565471 CFIP05156 583 aa20.66■□□□□ 0.9
CLN6-206ENST00000565471 SERPINF2P08697 491 aa20.66■□□□□ 0.9
CLN6-206ENST00000565471 PABPC1P11940 636 aaKnown RBP20.66■□□□□ 0.9
CLN6-206ENST00000565471 ENGP17813 658 aa20.66■□□□□ 0.9
CLN6-206ENST00000565471 SLC9A1P19634 815 aa20.66■□□□□ 0.9
CLN6-206ENST00000565471 CSRP1P21291 193 aaKnown RBP20.66■□□□□ 0.9
CLN6-206ENST00000565471 SLC6A4P31645 630 aa20.66■□□□□ 0.9
CLN6-206ENST00000565471 NOVA1P51513 510 aaKnown RBP20.66■□□□□ 0.9
CLN6-206ENST00000565471 SGSHP51688 502 aa20.66■□□□□ 0.9
CLN6-206ENST00000565471 EXOC3L4Q17RC7 722 aa20.66■□□□□ 0.9
CLN6-206ENST00000565471 RFWD3Q6PCD5 774 aa20.66■□□□□ 0.9
CLN6-206ENST00000565471 CHST9Q7L1S5 443 aa20.66■□□□□ 0.9
CLN6-206ENST00000565471 TMEM110Q86TL2 294 aa20.66■□□□□ 0.9
CLN6-206ENST00000565471 ADIPOR2Q86V24 386 aa20.66■□□□□ 0.9
CLN6-206ENST00000565471 CREBRFQ8IUR6 639 aa20.66■□□□□ 0.9
CLN6-206ENST00000565471 PRCCQ92733 491 aaPredicted RBP20.66■□□□□ 0.9
CLN6-206ENST00000565471 SIPA1Q96FS4 1042 aa20.66■□□□□ 0.9
CLN6-206ENST00000565471 SLC39A13Q96H72 371 aa20.66■□□□□ 0.9
CLN6-206ENST00000565471 TMEM245Q9H330 911 aa20.66■□□□□ 0.9
CLN6-206ENST00000565471 CAPN10Q9HC96 672 aa20.66■□□□□ 0.9
CLN6-206ENST00000565471 WSB2Q9NYS7 404 aaPredicted RBP20.66■□□□□ 0.9
CLN6-206ENST00000565471 NAALADL1Q9UQQ1 740 aa20.66■□□□□ 0.9
CLN6-206ENST00000565471 MUC22E2RYF6 1773 aaPredicted RBP20.66■□□□□ 0.9
CLN6-206ENST00000565471 GON4LQ3T8J9 2241 aa20.65■□□□□ 0.9
CLN6-206ENST00000565471 GOLGA6L7A0A1B0GV03 622 aa20.65■□□□□ 0.9
CLN6-206ENST00000565471 BECN2A8MW95 431 aa20.65■□□□□ 0.9
CLN6-206ENST00000565471 PAPSS1O43252 624 aaPredicted RBP20.65■□□□□ 0.9
CLN6-206ENST00000565471 TBL1XO60907 577 aa20.65■□□□□ 0.9
CLN6-206ENST00000565471 EPHX1P07099 455 aa20.65■□□□□ 0.9
CLN6-206ENST00000565471 C7P10643 843 aa20.65■□□□□ 0.9
CLN6-206ENST00000565471 OXTRP30559 389 aa20.65■□□□□ 0.9
CLN6-206ENST00000565471 TPMTP51580 245 aa20.65■□□□□ 0.9
CLN6-206ENST00000565471 COPAP53621 1224 aa20.65■□□□□ 0.9
CLN6-206ENST00000565471 GFPT1Q06210 699 aaPredicted RBP20.65■□□□□ 0.9
CLN6-206ENST00000565471 CAMK2GQ13555 558 aaPredicted RBP20.65■□□□□ 0.9
CLN6-206ENST00000565471 SYCP2LQ5T4T6 812 aa20.65■□□□□ 0.9
CLN6-206ENST00000565471 NADSYN1Q6IA69 706 aa20.65■□□□□ 0.9
CLN6-206ENST00000565471 PSAPL1Q6NUJ1 521 aa20.65■□□□□ 0.9
CLN6-206ENST00000565471 GJB7Q6PEY0 223 aa20.65■□□□□ 0.9
CLN6-206ENST00000565471 HJURPQ8NCD3 748 aaPredicted RBP20.65■□□□□ 0.9
CLN6-206ENST00000565471 SHC3Q92529 594 aa20.65■□□□□ 0.9
CLN6-206ENST00000565471 CLSTN2Q9H4D0 955 aa20.65■□□□□ 0.9
CLN6-206ENST00000565471 SUSD2Q9UGT4 822 aa20.65■□□□□ 0.9
CLN6-206ENST00000565471 CYTH4Q9UIA0 394 aa20.65■□□□□ 0.9
CLN6-206ENST00000565471 PLA2G4CQ9UP65 541 aa20.65■□□□□ 0.9
CLN6-206ENST00000565471 LAMA1P25391 3075 aa20.64■□□□□ 0.89
CLN6-206ENST00000565471 TYW5A2RUC4 315 aaKnown RBP20.64■□□□□ 0.89
CLN6-206ENST00000565471 E5RJQ4 531 aa20.64■□□□□ 0.89
CLN6-206ENST00000565471 CEACAM1P13688 526 aa20.64■□□□□ 0.89
CLN6-206ENST00000565471 PON1P27169 355 aa20.64■□□□□ 0.89
CLN6-206ENST00000565471 MAPK8P45983 427 aa20.64■□□□□ 0.89
CLN6-206ENST00000565471 PTPRNQ16849 979 aa20.64■□□□□ 0.89
CLN6-206ENST00000565471 FNDC3BQ53EP0 1204 aaKnown RBP20.64■□□□□ 0.89
CLN6-206ENST00000565471 WDR45BQ5MNZ6 344 aa20.64■□□□□ 0.89
CLN6-206ENST00000565471 SH3PXD2AQ5TCZ1 1133 aa20.64■□□□□ 0.89
CLN6-206ENST00000565471 MBLAC2Q68D91 279 aa20.64■□□□□ 0.89
CLN6-206ENST00000565471 TAC4Q86UU9 113 aa20.64■□□□□ 0.89
CLN6-206ENST00000565471 CADM4Q8NFZ8 388 aa20.64■□□□□ 0.89
CLN6-206ENST00000565471 OR2T3Q8NH03 318 aa20.64■□□□□ 0.89
CLN6-206ENST00000565471 WFDC5Q8TCV5 224 aa20.64■□□□□ 0.89
CLN6-206ENST00000565471 TOE1Q96GM8 510 aaKnown RBP20.64■□□□□ 0.89
CLN6-206ENST00000565471 PRICKLE1Q96MT3 831 aaPredicted RBP20.64■□□□□ 0.89
CLN6-206ENST00000565471 THAP9Q9H5L6 903 aa20.64■□□□□ 0.89
CLN6-206ENST00000565471 POPDC2Q9HBU9 364 aa20.64■□□□□ 0.89
CLN6-206ENST00000565471 ACP6Q9NPH0 428 aa20.64■□□□□ 0.89
CLN6-206ENST00000565471 NFE2L3Q9Y4A8 694 aa20.64■□□□□ 0.89
CLN6-206ENST00000565471 PCDH15Q96QU1 1955 aa20.64■□□□□ 0.89
CLN6-206ENST00000565471 CAPN9O14815 690 aa20.63■□□□□ 0.89
CLN6-206ENST00000565471 ATP5BP06576 529 aaKnown RBP20.63■□□□□ 0.89
CLN6-206ENST00000565471 DLDP09622 509 aaKnown RBP20.63■□□□□ 0.89
CLN6-206ENST00000565471 HLA-EP13747 358 aa20.63■□□□□ 0.89
CLN6-206ENST00000565471 MTIF2P46199 727 aaKnown RBP20.63■□□□□ 0.89
CLN6-206ENST00000565471 YWHAZP63104 245 aaKnown RBP20.63■□□□□ 0.89
CLN6-206ENST00000565471 SHC2P98077 582 aa20.63■□□□□ 0.89
CLN6-206ENST00000565471 PDCLQ13371 301 aa20.63■□□□□ 0.89
CLN6-206ENST00000565471 TPD52L1Q16890 204 aaPredicted RBP20.63■□□□□ 0.89
CLN6-206ENST00000565471 ARHGAP44Q17R89 818 aa20.63■□□□□ 0.89
CLN6-206ENST00000565471 UAP1L1Q3KQV9 507 aa20.63■□□□□ 0.89
CLN6-206ENST00000565471 SYPL2Q5VXT5 272 aa20.63■□□□□ 0.89
CLN6-206ENST00000565471 MFN1Q8IWA4 741 aa20.63■□□□□ 0.89
CLN6-206ENST00000565471 FAM114A1Q8IWE2 563 aa20.63■□□□□ 0.89
CLN6-206ENST00000565471 FIBINQ8TAL6 211 aa20.63■□□□□ 0.89
CLN6-206ENST00000565471 CYB5D2Q8WUJ1 264 aa20.63■□□□□ 0.89
CLN6-206ENST00000565471 FBRSQ9HAH7 460 aa20.63■□□□□ 0.89
CLN6-206ENST00000565471 ANGPTL2Q9UKU9 493 aa20.63■□□□□ 0.89
CLN6-206ENST00000565471 PCDHGC3Q9UN70 934 aa20.63■□□□□ 0.89
CLN6-206ENST00000565471 KCNJ18B7U540 433 aa20.62■□□□□ 0.89
CLN6-206ENST00000565471 IGLV3-25P01717 112 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms