RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 EBF2Q9HAK2 575 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 PDE11AQ9HCR9 933 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 DMAP1Q9NPF5 467 aaPredicted RBP9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 PRSS16Q9NQE7 514 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 FBXL12Q9NXK8 326 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 SATB2Q9UPW6 733 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 PCDHGA8Q9Y5G5 932 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 USP9YO00507 2555 aaPredicted RBP9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 CLEC18AA5D8T8 446 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 CYP26A1O43174 497 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 EFSO43281 561 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 GP1BAP07359 652 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 FAM87AP0C7U9 286 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 CKMT1AP12532 417 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 GARTP22102 1010 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 MLLT3P42568 568 aaPredicted RBP9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 HARS2P49590 506 aaKnown RBP9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 WNT7BP56706 349 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 COG7P83436 770 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 PDE4CQ08493 712 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 OVGP1Q12889 678 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 CLN3Q13286 438 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 SURF1Q15526 300 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 ISXQ2M1V0 245 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 C3orf38Q5JPI3 329 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 C10orf120Q5SQS8 335 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 TMEM215Q68D42 235 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 ATL3Q6DD88 541 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 CLEC18BQ6UXF7 455 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 TMC6Q7Z403 805 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 IQCHQ86VS3 1027 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 RBBP8NLQ8NC74 664 aaPredicted RBP9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 CLEC18CQ8NCF0 446 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 DDI1Q8WTU0 396 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 HVCN1Q96D96 273 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 SAAL1Q96ER3 474 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 FIZ1Q96SL8 496 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 OMDQ99983 421 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 GZF1Q9H116 711 aaPredicted RBP9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 SLC25A18Q9H1K4 315 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 PABPC3Q9H361 631 aaKnown RBP9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 CYLDQ9NQC7 956 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 INTS13Q9NVM9 706 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 HSPBP1Q9NZL4 362 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 ATXN7L1Q9ULK2 861 aaPredicted RBP9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 ANK1P16157 1881 aa9.48□□□□□ -0.89
VPS9D1-205ENST00000565452 BLACEA4D250 179 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 WNT9AO14904 365 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 SLC26A4O43511 780 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 KRT38O76015 456 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 STC2O76061 302 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 BMP15O95972 392 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 ATP5BP06576 529 aaKnown RBP9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 THEGLP0DJG4 465 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 ALPPL2P10696 532 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 RARGP13631 454 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 PGFP49763 221 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 RIPPLY3P57055 190 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 TNNC1P63316 161 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 STAT4Q14765 748 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 WDR72Q3MJ13 1102 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 DYMQ7RTS9 669 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 PRPF39Q86UA1 669 aaKnown RBP9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 SPATS2Q86XZ4 545 aaKnown RBP9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 SYCP3Q8IZU3 236 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 SLC25A45Q8N413 288 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 ZNF366Q8N895 744 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 ZSCAN1Q8NBB4 408 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 RDH13Q8NBN7 331 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 OR4C6Q8NH72 309 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 TPCN2Q8NHX9 752 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 MAPK15Q8TD08 544 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 WFIKKN2Q8TEU8 576 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 NOC3LQ8WTT2 800 aaKnown RBP9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 CALML4Q96GE6 196 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 SMARCD1Q96GM5 515 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 ACCSQ96QU6 501 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 NEUROG2Q9H2A3 272 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 DPEP3Q9H4B8 488 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 USP29Q9HBJ7 922 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 SCML2Q9UQR0 700 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 ATP6V1DQ9Y5K8 247 aa9.47□□□□□ -0.89
VPS9D1-205ENST00000565452 MYLKQ15746 1914 aa9.46□□□□□ -0.89
VPS9D1-205ENST00000565452 DOPEY1Q5JWR5 2465 aa9.46□□□□□ -0.89
VPS9D1-205ENST00000565452 BOD1L1Q8NFC6 3051 aa9.46□□□□□ -0.89
VPS9D1-205ENST00000565452 A0A1B0GVM2 712 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 VPS37CA5D8V6 355 aaPredicted RBP9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 GOLGA8IPA6NC78 632 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 GOLGA8JA6NMD2 632 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 CDRT15L2A8MXV6 281 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 SDC3O75056 442 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 RNASEH2AO75792 299 aaKnown RBP9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 AP1G2O75843 785 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 TNFSF15O95150 251 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 KLKB1P03952 638 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 ZSCAN22P10073 491 aaPredicted RBP9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 NUDT1P36639 197 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 TOB1P50616 345 aaPredicted RBP9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 NUCB2P80303 420 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 FOXK1P85037 733 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms