RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 EXTL2Q9UBQ6 330 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 HMGXB4Q9UGU5 601 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 SRP68Q9UHB9 627 aaKnown RBP5.36□□□□□ -1.55
CAPN3-214ENST00000565274 TRHDEQ9UKU6 1024 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 TTC7AQ9ULT0 858 aaPredicted RBP5.36□□□□□ -1.55
CAPN3-214ENST00000565274 STX8Q9UNK0 236 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 C19orf53Q9UNZ5 99 aaPredicted RBP5.36□□□□□ -1.55
CAPN3-214ENST00000565274 ZNF536O15090 1300 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 KIF13BQ9NQT8 1826 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 NHSQ6T4R5 1651 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 RRN3P2A6NIE6 340 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 ZNF233A6NK53 670 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 LRRC53A6NM62 1247 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 E9PMD0 336 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 STX16-NPEPL1H3BU86 382 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 K7EPI3 171 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 L7N2F9 121 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 PDXKO00764 312 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 ZBTB5O15062 677 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 EPHB6O15197 1021 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 SLC16A3O15427 465 aaKnown RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 SPOPO43791 374 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 SLC37A4O43826 429 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 FZD6O60353 706 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 EIF4EBP3O60516 100 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 TLR2O60603 784 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 CBFA2T3O75081 653 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 ECDO95905 644 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 PENKP01210 267 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 IGHA2P01877 340 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 ZBTB48P10074 688 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 GHRP10912 638 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 CSF2RAP15509 400 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 ARF4P18085 180 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 ATP5F1P24539 256 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 HOXA6P31267 233 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 GRK6P43250 576 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 CBX5P45973 191 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 CPA2P48052 419 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 YBEYP58557 167 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 TNNC1P63316 161 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 CYP4F8P98187 520 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 KDSRQ06136 332 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 IFFO1Q0D2I5 559 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 COASYQ13057 564 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 CDK5R2Q13319 367 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 ITGB3BPQ13352 177 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 TRPC3Q13507 836 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 ITGA7Q13683 1181 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 NAA25Q14CX7 972 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 IFI16Q16666 785 aaKnown RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 LACTB2Q53H82 288 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 TCTE1Q5JU00 501 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 KCNT1Q5JUK3 1230 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 CEP85LQ5SZL2 805 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 MEI1Q5TIA1 1274 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 AGBL2Q5U5Z8 902 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 FYB2Q5VWT5 728 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 PRR5LQ6MZQ0 368 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 CCDC62Q6P9F0 684 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 OGFOD3Q6PK18 319 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 CLEC2AQ6UVW9 174 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 RANBP10Q6VN20 620 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 RRAGAQ7L523 313 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 RAB11FIP2Q7L804 512 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 SLFN11Q7Z7L1 901 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 ZBTB46Q86UZ6 589 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 C2CD5Q86YS7 1000 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 CCNJLQ8IV13 435 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 P3H2Q8IVL5 708 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 PLD6Q8N2A8 252 aaKnown RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 CELF2-AS1Q8N7Q2 184 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 MAB21L3Q8N8X9 362 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 CNBD1Q8NA66 436 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 RFWD2Q8NHY2 731 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 TBC1D16Q8TBP0 767 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 IFI44Q8TCB0 444 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 ACTRT1Q8TDG2 376 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 DIS3LQ8TF46 1054 aaKnown RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 SCFD2Q8WU76 684 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 DCAF4Q8WV16 495 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 CASKIN2Q8WXE0 1202 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 SEC14L1Q92503 715 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 CCT6BQ92526 530 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 RAPGEF5Q92565 580 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 KIFAP3Q92845 792 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 CASP10Q92851 521 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 HDAC11Q96DB2 347 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 MFSD3Q96ES6 412 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 CYFIP2Q96F07 1278 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 ZC3H10Q96K80 434 aaKnown RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 PBKQ96KB5 322 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 INPP4AQ96PE3 977 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 NR1H4Q96RI1 486 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 YME1L1Q96TA2 773 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 DDX50Q9BQ39 737 aaKnown RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 TCF25Q9BQ70 676 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 BCL7BQ9BQE9 202 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 TRIM56Q9BRZ2 755 aaKnown RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 EIF2AQ9BY44 585 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms