RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 MS4A14Q96JA4 679 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 PRKD2Q9BZL6 878 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 ADAM7Q9H2U9 754 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 WDCPQ9H6R7 721 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 TRPC7Q9HCX4 862 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.5□□□□□ -0.57
SF3B3-205ENST00000564899 DZANK1Q9NVP4 752 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 DNMT3LQ9UJW3 386 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 FZD10Q9ULW2 581 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 AP4E1Q9UPM8 1137 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 TLR6Q9Y2C9 796 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 CCDC195A0A1B0GUA6 201 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 SLC12A8A0AV02 714 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 C2orf78A6NCI8 922 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 PGRMC1O00264 195 aaKnown RBP11.49□□□□□ -0.57
SF3B3-205ENST00000564899 COCHO43405 550 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 OAS1P00973 400 aaKnown RBP11.49□□□□□ -0.57
SF3B3-205ENST00000564899 PTPN2P17706 415 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 CCR1P32246 355 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 ADRA1BP35368 520 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 ATP5C1P36542 298 aaKnown RBP11.49□□□□□ -0.57
SF3B3-205ENST00000564899 PAFAH1B1P43034 410 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 KPNA1P52294 538 aaPredicted RBP11.49□□□□□ -0.57
SF3B3-205ENST00000564899 NUBP1P53384 320 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 AIF1P55008 147 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 CDH6P55285 790 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 TBX4P57082 545 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 CYP4F8P98187 520 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 SCAPQ12770 1279 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 NNTQ13423 1086 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 EIF4EBP2Q13542 120 aaPredicted RBP11.49□□□□□ -0.57
SF3B3-205ENST00000564899 TRIP4Q15650 581 aaPredicted RBP11.49□□□□□ -0.57
SF3B3-205ENST00000564899 DPYSL2Q16555 572 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 CA9Q16790 459 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 ZC3H12AQ5D1E8 599 aaKnown RBP11.49□□□□□ -0.57
SF3B3-205ENST00000564899 EFHC2Q5JST6 749 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 BRMS1LQ5PSV4 323 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 MFSD7Q6UXD7 560 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 GAREM2Q75VX8 874 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 PDZD4Q76G19 769 aaPredicted RBP11.49□□□□□ -0.57
SF3B3-205ENST00000564899 PSTKQ8IV42 348 aaKnown RBP11.49□□□□□ -0.57
SF3B3-205ENST00000564899 UBALD2Q8IYN6 164 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 RASGEF1CQ8N431 466 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 CMASQ8NFW8 434 aaPredicted RBP11.49□□□□□ -0.57
SF3B3-205ENST00000564899 ACTRT1Q8TDG2 376 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 ZNF707Q96C28 371 aaPredicted RBP11.49□□□□□ -0.57
SF3B3-205ENST00000564899 TKTL2Q9H0I9 626 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 ATXN3LQ9H3M9 355 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 DHX35Q9H5Z1 703 aaKnown RBP11.49□□□□□ -0.57
SF3B3-205ENST00000564899 SFXN1Q9H9B4 322 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 HCFC1R1Q9NWW0 138 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 SMARCAL1Q9NZC9 954 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 DNMT3BQ9UBC3 853 aaKnown RBP11.49□□□□□ -0.57
SF3B3-205ENST00000564899 RNF14Q9UBS8 474 aa11.49□□□□□ -0.57
SF3B3-205ENST00000564899 TTC7AQ9ULT0 858 aaPredicted RBP11.49□□□□□ -0.57
SF3B3-205ENST00000564899 C2orf16Q68DN1 1984 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 CACNA1GO43497 2377 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 CHD6Q8TD26 2715 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 A0A1W2PRU2 124 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 PDE2AO00408 941 aaPredicted RBP11.48□□□□□ -0.57
SF3B3-205ENST00000564899 NARSO43776 548 aaKnown RBP11.48□□□□□ -0.57
SF3B3-205ENST00000564899 MOCS2O96007 188 aaPredicted RBP11.48□□□□□ -0.57
SF3B3-205ENST00000564899 APOEP02649 317 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 FGGP02679 453 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 RHOP08100 348 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 HMBSP08397 361 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 CD48P09326 243 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 SRGAP2BP0DMP2 458 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 SLC2A3P11169 496 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 MBL2P11226 248 aaPredicted RBP11.48□□□□□ -0.57
SF3B3-205ENST00000564899 GJA1P17302 382 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 KDELR1P24390 212 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 CDKN2BP42772 138 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 ARSEP51690 589 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 EPHA5P54756 1037 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 COPS2P61201 443 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 PPP2R5DQ14738 602 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 PDK2Q15119 407 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 LLGL1Q15334 1064 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 ANGPT1Q15389 498 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 PPP2R5EQ16537 467 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 LONRF2Q1L5Z9 754 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 PPP6R3Q5H9R7 873 aaPredicted RBP11.48□□□□□ -0.57
SF3B3-205ENST00000564899 TXNDC8Q6A555 127 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 TMC5Q6UXY8 1006 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 SPOCD1Q6ZMY3 1216 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 SLC13A5Q86YT5 568 aaPredicted RBP11.48□□□□□ -0.57
SF3B3-205ENST00000564899 MAP7D3Q8IWC1 876 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 SMG7Q92540 1137 aaKnown RBP11.48□□□□□ -0.57
SF3B3-205ENST00000564899 SLC39A13Q96H72 371 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 FCRL2Q96LA5 508 aaPredicted RBP11.48□□□□□ -0.57
SF3B3-205ENST00000564899 KCTD15Q96SI1 283 aaPredicted RBP11.48□□□□□ -0.57
SF3B3-205ENST00000564899 NAP1L3Q99457 506 aaPredicted RBP11.48□□□□□ -0.57
SF3B3-205ENST00000564899 CARD6Q9BX69 1037 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 CALN1Q9BXU9 219 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 OSBPL8Q9BZF1 889 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 PIDD1Q9HB75 910 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 PCDH18Q9HCL0 1135 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 ANLNQ9NQW6 1124 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 TMPRSS4Q9NRS4 437 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms