RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 NAGPAQ9UK23 515 aa19.76■□□□□ 0.75
NME3-207ENST00000564628 PCDHGC3Q9UN70 934 aa19.76■□□□□ 0.75
NME3-207ENST00000564628 AKAP13Q12802 2813 aa19.76■□□□□ 0.75
NME3-207ENST00000564628 MYO18AQ92614 2054 aaKnown RBP19.75■□□□□ 0.75
NME3-207ENST00000564628 PCDH15Q96QU1 1955 aa19.75■□□□□ 0.75
NME3-207ENST00000564628 IGHV1OR15-9A0A0B4J2B8 117 aa19.75■□□□□ 0.75
NME3-207ENST00000564628 SPAARA0A1B0GVQ0 90 aa19.75■□□□□ 0.75
NME3-207ENST00000564628 SRRM3A6NNA2 597 aaPredicted RBP19.75■□□□□ 0.75
NME3-207ENST00000564628 F8VZ95 297 aa19.75■□□□□ 0.75
NME3-207ENST00000564628 EPHB6O15197 1021 aa19.75■□□□□ 0.75
NME3-207ENST00000564628 THAP12O43422 761 aa19.75■□□□□ 0.75
NME3-207ENST00000564628 HYAL3O43820 417 aaPredicted RBP19.75■□□□□ 0.75
NME3-207ENST00000564628 CACNG3O60359 315 aa19.75■□□□□ 0.75
NME3-207ENST00000564628 GREM1O60565 184 aa19.75■□□□□ 0.75
NME3-207ENST00000564628 OPHN1O60890 802 aa19.75■□□□□ 0.75
NME3-207ENST00000564628 TBX18O95935 607 aa19.75■□□□□ 0.75
NME3-207ENST00000564628 RDXP35241 583 aaKnown RBP19.75■□□□□ 0.75
NME3-207ENST00000564628 RGS7P49802 495 aa19.75■□□□□ 0.75
NME3-207ENST00000564628 DAOAP59103 153 aa19.75■□□□□ 0.75
NME3-207ENST00000564628 RAPGEF1Q13905 1077 aa19.75■□□□□ 0.75
NME3-207ENST00000564628 HNRNPDQ14103 355 aaKnown RBP19.75■□□□□ 0.75
NME3-207ENST00000564628 SYCP1Q15431 976 aa19.75■□□□□ 0.75
NME3-207ENST00000564628 ZCCHC14Q8WYQ9 949 aaKnown RBP19.75■□□□□ 0.75
NME3-207ENST00000564628 WBP2Q969T9 261 aa19.75■□□□□ 0.75
NME3-207ENST00000564628 XPO6Q96QU8 1125 aaKnown RBP19.75■□□□□ 0.75
NME3-207ENST00000564628 CDK5RAP1Q96SZ6 601 aaKnown RBP19.75■□□□□ 0.75
NME3-207ENST00000564628 GABRG3Q99928 467 aa19.75■□□□□ 0.75
NME3-207ENST00000564628 GTPBP2Q9BX10 602 aaKnown RBP19.75■□□□□ 0.75
NME3-207ENST00000564628 KLF16Q9BXK1 252 aaPredicted RBP19.75■□□□□ 0.75
NME3-207ENST00000564628 CBX8Q9HC52 389 aa19.75■□□□□ 0.75
NME3-207ENST00000564628 DNAJC17Q9NVM6 304 aaKnown RBP19.75■□□□□ 0.75
NME3-207ENST00000564628 WDR35Q9P2L0 1181 aa19.75■□□□□ 0.75
NME3-207ENST00000564628 PCNX2A6NKB5 2137 aa19.75■□□□□ 0.75
NME3-207ENST00000564628 CEP192Q8TEP8 1941 aa19.74■□□□□ 0.75
NME3-207ENST00000564628 FAM221BA6H8Z2 402 aa19.74■□□□□ 0.75
NME3-207ENST00000564628 ARHGAP33O14559 1287 aa19.74■□□□□ 0.75
NME3-207ENST00000564628 TRIM24O15164 1050 aa19.74■□□□□ 0.75
NME3-207ENST00000564628 IRF1P10914 325 aa19.74■□□□□ 0.75
NME3-207ENST00000564628 ATP5C1P36542 298 aaKnown RBP19.74■□□□□ 0.75
NME3-207ENST00000564628 JAM2P57087 298 aa19.74■□□□□ 0.75
NME3-207ENST00000564628 YWHAGP61981 247 aaKnown RBP eCLIP19.74■□□□□ 0.75
NME3-207ENST00000564628 UBXN1Q04323 297 aa19.74■□□□□ 0.75
NME3-207ENST00000564628 PTK2Q05397 1052 aa19.74■□□□□ 0.75
NME3-207ENST00000564628 EGFLAMQ63HQ2 1017 aa19.74■□□□□ 0.75
NME3-207ENST00000564628 SLC47A2Q86VL8 602 aa19.74■□□□□ 0.75
NME3-207ENST00000564628 CHPFQ8IZ52 775 aa19.74■□□□□ 0.75
NME3-207ENST00000564628 SIX6OS1Q8N1H7 587 aa19.74■□□□□ 0.75
NME3-207ENST00000564628 IPO4Q8TEX9 1081 aaKnown RBP19.74■□□□□ 0.75
NME3-207ENST00000564628 NDRG1Q92597 394 aaKnown RBP19.74■□□□□ 0.75
NME3-207ENST00000564628 SLC4A5Q9BY07 1137 aa19.74■□□□□ 0.75
NME3-207ENST00000564628 FAM207AQ9NSI2 230 aaPredicted RBP19.74■□□□□ 0.75
NME3-207ENST00000564628 DNAAF2Q9NVR5 837 aaKnown RBP19.74■□□□□ 0.75
NME3-207ENST00000564628 CYTH4Q9UIA0 394 aa19.74■□□□□ 0.75
NME3-207ENST00000564628 CACNA1GO43497 2377 aa19.74■□□□□ 0.75
NME3-207ENST00000564628 YJEFN3A6XGL0 299 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 E7ENQ6 273 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 SYPP08247 313 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 RALAP11233 206 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 TYRP14679 529 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 NDUFV2P19404 249 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 WASP42768 502 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 BPIFB4P59827 614 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 GOLGA8FQ08AF8 430 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 GOLGA8DPQ0D2H9 430 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 SLC14A1Q13336 389 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 TADA2BQ86TJ2 420 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 GAS2L3Q86XJ1 694 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 SLC41A1Q8IVJ1 513 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 MINDY1Q8N5J2 469 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 DEFB119Q8N690 84 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 IRGQQ8WZA9 623 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 ACOX2Q99424 681 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 BBS2Q9BXC9 721 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 LHX5Q9H2C1 402 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 RTN4Q9NQC3 1192 aaKnown RBP19.73■□□□□ 0.75
NME3-207ENST00000564628 FSCN3Q9NQT6 498 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 DNMT3LQ9UJW3 386 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 LSM7Q9UK45 103 aaKnown RBP19.73■□□□□ 0.75
NME3-207ENST00000564628 NUDT5Q9UKK9 219 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 KLK13Q9UKR3 277 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 GON4LQ3T8J9 2241 aa19.73■□□□□ 0.75
NME3-207ENST00000564628 NEDD8-MDP1E9PL57 170 aa19.72■□□□□ 0.75
NME3-207ENST00000564628 GFRA2O00451 464 aa19.72■□□□□ 0.75
NME3-207ENST00000564628 MDM4O15151 490 aa19.72■□□□□ 0.75
NME3-207ENST00000564628 FBXO21O94952 628 aa19.72■□□□□ 0.75
NME3-207ENST00000564628 LCP1P13796 627 aa19.72■□□□□ 0.75
NME3-207ENST00000564628 POLR2FP61218 127 aaKnown RBP19.72■□□□□ 0.75
NME3-207ENST00000564628 PDCLQ13371 301 aa19.72■□□□□ 0.75
NME3-207ENST00000564628 ZNF423Q2M1K9 1284 aa19.72■□□□□ 0.75
NME3-207ENST00000564628 C10orf120Q5SQS8 335 aa19.72■□□□□ 0.75
NME3-207ENST00000564628 PKD1L2Q7Z442 2459 aa19.72■□□□□ 0.75
NME3-207ENST00000564628 WDTC1Q8N5D0 677 aa19.72■□□□□ 0.75
NME3-207ENST00000564628 ZNF419Q96HQ0 510 aaPredicted RBP19.72■□□□□ 0.75
NME3-207ENST00000564628 HSPA12BQ96MM6 686 aa19.72■□□□□ 0.75
NME3-207ENST00000564628 CYP8B1Q9UNU6 501 aa19.72■□□□□ 0.75
NME3-207ENST00000564628 WDFY3Q8IZQ1 3526 aa19.72■□□□□ 0.75
NME3-207ENST00000564628 CACNA1EQ15878 2313 aa19.71■□□□□ 0.75
NME3-207ENST00000564628 ADAMTS9Q9P2N4 1935 aa19.71■□□□□ 0.75
NME3-207ENST00000564628 A0A1B0GTH6 734 aa19.71■□□□□ 0.75
NME3-207ENST00000564628 PRRT4C9JH25 899 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms