RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 SLC3A2P08195 630 aaKnown RBP5.26□□□□□ -1.57
LINC00560-201ENST00000564593 APEHP13798 732 aaKnown RBP5.26□□□□□ -1.57
LINC00560-201ENST00000564593 XBP1P17861 261 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 TACR2P21452 398 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 PCP4P48539 62 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 RCAN1P53805 252 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 FOXL2P58012 376 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 TAS2R50P59544 299 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 TLE2Q04725 743 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 MFSD13AQ14CX5 517 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 ANKRD1Q15327 319 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 ERCC6LQ2NKX8 1250 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 CTXN3Q4LDR2 81 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 LRRC24Q50LG9 513 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 CEP85Q6P2H3 762 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 KYAT3Q6YP21 454 aaKnown RBP5.26□□□□□ -1.57
LINC00560-201ENST00000564593 BCDIN3DQ7Z5W3 292 aaKnown RBP5.26□□□□□ -1.57
LINC00560-201ENST00000564593 TMTC1Q8IUR5 882 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 ESX1Q8N693 406 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 LINC01465Q8N7H1 131 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 NAXEQ8NCW5 288 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 CAGE1Q8TC20 777 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 SLC2A12Q8TD20 617 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 KTI12Q96EK9 354 aaPredicted RBP5.26□□□□□ -1.57
LINC00560-201ENST00000564593 DAZAP1Q96EP5 407 aaKnown RBP5.26□□□□□ -1.57
LINC00560-201ENST00000564593 TWNKQ96RR1 684 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 PIGSQ96S52 555 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 ADGRE3Q9BY15 652 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 RMI1Q9H9A7 625 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 IL17RBQ9NRM6 502 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 DNAJC16Q9Y2G8 782 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 ENTPD2Q9Y5L3 495 aa5.26□□□□□ -1.57
LINC00560-201ENST00000564593 TTC34A8MYJ7 566 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 CLIC1O00299 241 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 FOXN1O15353 648 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 HNRNPRO43390 633 aaKnown RBP5.25□□□□□ -1.57
LINC00560-201ENST00000564593 C6P13671 934 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 GDF5P43026 501 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 AGTR2P50052 363 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 WDR5P61964 334 aaKnown RBP5.25□□□□□ -1.57
LINC00560-201ENST00000564593 HOXA4Q00056 320 aaPredicted RBP5.25□□□□□ -1.57
LINC00560-201ENST00000564593 CHRNDQ07001 517 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 TBX2Q13207 712 aaPredicted RBP5.25□□□□□ -1.57
LINC00560-201ENST00000564593 SLC4A8Q2Y0W8 1093 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 ZNF484Q5JVG2 852 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 TMEM63BQ5T3F8 832 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 INTS11Q5TA45 600 aaKnown RBP5.25□□□□□ -1.57
LINC00560-201ENST00000564593 AKAP1Q92667 903 aaKnown RBP eCLIP5.25□□□□□ -1.57
LINC00560-201ENST00000564593 BBC3Q96PG8 261 aaPredicted RBP5.25□□□□□ -1.57
LINC00560-201ENST00000564593 MRIQ9BWK5 157 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 SLITRK6Q9H5Y7 841 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 WASH6PQ9NQA3 447 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 PI4KBQ9UBF8 816 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 SLC13A4Q9UKG4 626 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 RCE1Q9Y256 329 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 HOXC11O43248 304 aaPredicted RBP5.25□□□□□ -1.57
LINC00560-201ENST00000564593 ALDOAP04075 364 aaKnown RBP5.25□□□□□ -1.57
LINC00560-201ENST00000564593 CNPP09543 421 aaKnown RBP5.25□□□□□ -1.57
LINC00560-201ENST00000564593 SLC8A1P32418 973 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 CCR5P51681 352 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 TRPC3Q13507 836 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 RALBP1Q15311 655 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 CNGA3Q16281 694 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 AKNAD1Q5T1N1 836 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 MAP3K21Q5TCX8 1036 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 TMEM65Q6PI78 240 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 TRIM72Q6ZMU5 477 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 Q8N1X5 172 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 PTGR2Q8N8N7 351 aaPredicted RBP5.25□□□□□ -1.57
LINC00560-201ENST00000564593 SRFBP1Q8NEF9 429 aaKnown RBP5.25□□□□□ -1.57
LINC00560-201ENST00000564593 CLEC4CQ8WTT0 213 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 KAZALD1Q96I82 304 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 MPP4Q96JB8 637 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 CCDC17Q96LX7 622 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 PPM1MQ96MI6 270 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 CPNE5Q9HCH3 593 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 PDE11AQ9HCR9 933 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 ASIC5Q9NY37 505 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 SLC17A6Q9P2U8 582 aa5.25□□□□□ -1.57
LINC00560-201ENST00000564593 C3orf70A6NLC5 250 aaPredicted RBP5.24□□□□□ -1.57
LINC00560-201ENST00000564593 RAMP2O60895 175 aa5.24□□□□□ -1.57
LINC00560-201ENST00000564593 GCATO75600 419 aa5.24□□□□□ -1.57
LINC00560-201ENST00000564593 JTBO76095 146 aa5.24□□□□□ -1.57
LINC00560-201ENST00000564593 RHOBTB3O94955 611 aa5.24□□□□□ -1.57
LINC00560-201ENST00000564593 SLPIP03973 132 aa5.24□□□□□ -1.57
LINC00560-201ENST00000564593 CPA1P15085 419 aa5.24□□□□□ -1.57
LINC00560-201ENST00000564593 CHN1P15882 459 aa5.24□□□□□ -1.57
LINC00560-201ENST00000564593 CACNA2D1P54289 1103 aa5.24□□□□□ -1.57
LINC00560-201ENST00000564593 SOX10P56693 466 aa5.24□□□□□ -1.57
LINC00560-201ENST00000564593 G3BP1Q13283 466 aaKnown RBP eCLIP5.24□□□□□ -1.57
LINC00560-201ENST00000564593 GAB1Q13480 694 aa5.24□□□□□ -1.57
LINC00560-201ENST00000564593 KCNB1Q14721 858 aa5.24□□□□□ -1.57
LINC00560-201ENST00000564593 SERPINA13PQ6UXR4 307 aa5.24□□□□□ -1.57
LINC00560-201ENST00000564593 DCDC5Q6ZRR9 648 aa5.24□□□□□ -1.57
LINC00560-201ENST00000564593 USP38Q8NB14 1042 aa5.24□□□□□ -1.57
LINC00560-201ENST00000564593 LINS1Q8NG48 757 aa5.24□□□□□ -1.57
LINC00560-201ENST00000564593 ARRDC3Q96B67 414 aa5.24□□□□□ -1.57
LINC00560-201ENST00000564593 RBM17Q96I25 401 aaKnown RBP5.24□□□□□ -1.57
LINC00560-201ENST00000564593 UROC1Q96N76 676 aa5.24□□□□□ -1.57
LINC00560-201ENST00000564593 SEC62Q99442 399 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms