RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 H2AFZP0C0S5 128 aa17.3■□□□□ 0.36
RNF40-206ENST00000564260 CYLC1P35663 651 aaPredicted RBP17.3■□□□□ 0.36
RNF40-206ENST00000564260 GRIA2P42262 883 aa17.3■□□□□ 0.36
RNF40-206ENST00000564260 PITX1P78337 314 aaPredicted RBP17.3■□□□□ 0.36
RNF40-206ENST00000564260 NRG1Q02297 640 aaPredicted RBP17.3■□□□□ 0.36
RNF40-206ENST00000564260 NME3Q13232 169 aa17.3■□□□□ 0.36
RNF40-206ENST00000564260 CCINQ13939 588 aa17.3■□□□□ 0.36
RNF40-206ENST00000564260 HSF5Q4G112 596 aaPredicted RBP17.3■□□□□ 0.36
RNF40-206ENST00000564260 FAM133BQ5BKY9 247 aaKnown RBP17.3■□□□□ 0.36
RNF40-206ENST00000564260 PIK3R6Q5UE93 754 aa17.3■□□□□ 0.36
RNF40-206ENST00000564260 TRNP1Q6NT89 227 aa17.3■□□□□ 0.36
RNF40-206ENST00000564260 H2AFVQ71UI9 128 aa17.3■□□□□ 0.36
RNF40-206ENST00000564260 EMC1Q8N766 993 aa17.3■□□□□ 0.36
RNF40-206ENST00000564260 FLCNQ8NFG4 579 aa17.3■□□□□ 0.36
RNF40-206ENST00000564260 CTNNBL1Q8WYA6 563 aaPredicted RBP17.3■□□□□ 0.36
RNF40-206ENST00000564260 CHFRQ96EP1 664 aa17.3■□□□□ 0.36
RNF40-206ENST00000564260 TMA16Q96EY4 203 aaKnown RBP17.3■□□□□ 0.36
RNF40-206ENST00000564260 CALR3Q96L12 384 aaKnown RBP17.3■□□□□ 0.36
RNF40-206ENST00000564260 CFAP57Q96MR6 1250 aa17.3■□□□□ 0.36
RNF40-206ENST00000564260 EIF3CQ99613 913 aaKnown RBP17.3■□□□□ 0.36
RNF40-206ENST00000564260 TICRRQ7Z2Z1 1910 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 NEDD8-MDP1E9PL57 170 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 F5H5T6 163 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 NPC1O15118 1278 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 TMEM253P0C7T8 217 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 TARSP26639 723 aaKnown RBP17.29■□□□□ 0.36
RNF40-206ENST00000564260 OPRD1P41143 372 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 TNFRSF4P43489 277 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 OXCT1P55809 520 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 GFPT1Q06210 699 aaPredicted RBP17.29■□□□□ 0.36
RNF40-206ENST00000564260 SCAPQ12770 1279 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 UBXN2BQ14CS0 331 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 C5orf22Q49AR2 442 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 MS4A13Q5J8X5 152 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 RABGAP1LQ5R372 815 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 IER5LQ5T953 404 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 TXNDC11Q6PKC3 985 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 PSTKQ8IV42 348 aaKnown RBP17.29■□□□□ 0.36
RNF40-206ENST00000564260 CCDC117Q8IWD4 279 aaPredicted RBP17.29■□□□□ 0.36
RNF40-206ENST00000564260 CCDC105Q8IYK2 499 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 JOSD2Q8TAC2 188 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 DDI1Q8WTU0 396 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 FAM172AQ8WUF8 416 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 CHP1Q99653 195 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 TKTL2Q9H0I9 626 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 GRPEL1Q9HAV7 217 aa17.29■□□□□ 0.36
RNF40-206ENST00000564260 ATG13O75143 517 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 TULP3O75386 442 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 RNF8O76064 485 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 IPO7O95373 1038 aaKnown RBP17.28■□□□□ 0.36
RNF40-206ENST00000564260 APODP05090 189 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 CHRNB1P11230 501 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 HTR7P34969 479 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 PCK1P35558 622 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 SOX9P48436 509 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 GALK1P51570 392 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 ZNF135P52742 658 aaPredicted RBP17.28■□□□□ 0.36
RNF40-206ENST00000564260 RPL7AP62424 266 aaKnown RBP17.28■□□□□ 0.36
RNF40-206ENST00000564260 PIGHQ14442 188 aaPredicted RBP17.28■□□□□ 0.36
RNF40-206ENST00000564260 EIF4HQ15056 248 aaKnown RBP17.28■□□□□ 0.36
RNF40-206ENST00000564260 TCEAL1Q15170 157 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 TPGS1Q6ZTW0 290 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 CHSY1Q86X52 802 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 RHOT2Q8IXI1 618 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 TXLNBQ8N3L3 684 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 NIPA2Q8N8Q9 360 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 TERB1Q8NA31 727 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 PPP1R9BQ96SB3 815 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 PRMT1Q99873 361 aaKnown RBP17.28■□□□□ 0.36
RNF40-206ENST00000564260 LRFN3Q9BTN0 628 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 THAP2Q9H0W7 228 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 OSBPL2Q9H1P3 480 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 CHRDQ9H2X0 955 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 DLGAP2Q9P1A6 1054 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 STARD13Q9Y3M8 1113 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 F5P12259 2224 aa17.28■□□□□ 0.36
RNF40-206ENST00000564260 TIMM44O43615 452 aa17.27■□□□□ 0.36
RNF40-206ENST00000564260 PAGE1O75459 146 aa17.27■□□□□ 0.36
RNF40-206ENST00000564260 KAT7O95251 611 aa17.27■□□□□ 0.36
RNF40-206ENST00000564260 MOCS2O96007 188 aaPredicted RBP17.27■□□□□ 0.36
RNF40-206ENST00000564260 TACR2P21452 398 aa17.27■□□□□ 0.36
RNF40-206ENST00000564260 HOXD9P28356 352 aaPredicted RBP17.27■□□□□ 0.36
RNF40-206ENST00000564260 AVPR2P30518 371 aa17.27■□□□□ 0.36
RNF40-206ENST00000564260 DGKGP49619 791 aa17.27■□□□□ 0.36
RNF40-206ENST00000564260 GALCP54803 685 aa17.27■□□□□ 0.36
RNF40-206ENST00000564260 HDAC4P56524 1084 aa17.27■□□□□ 0.36
RNF40-206ENST00000564260 ATP11AP98196 1134 aa17.27■□□□□ 0.36
RNF40-206ENST00000564260 SLC12A1Q13621 1099 aa17.27■□□□□ 0.36
RNF40-206ENST00000564260 PON2Q15165 354 aa17.27■□□□□ 0.36
RNF40-206ENST00000564260 SPA17Q15506 151 aa17.27■□□□□ 0.36
RNF40-206ENST00000564260 NADSYN1Q6IA69 706 aa17.27■□□□□ 0.36
RNF40-206ENST00000564260 GRAMD4Q6IC98 578 aa17.27■□□□□ 0.36
RNF40-206ENST00000564260 LRRC31Q6UY01 552 aa17.27■□□□□ 0.36
RNF40-206ENST00000564260 TRMT11Q7Z4G4 463 aaKnown RBP17.27■□□□□ 0.36
RNF40-206ENST00000564260 PHTF2Q8N3S3 785 aa17.27■□□□□ 0.36
RNF40-206ENST00000564260 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.27■□□□□ 0.36
RNF40-206ENST00000564260 TTC8Q8TAM2 541 aa17.27■□□□□ 0.36
RNF40-206ENST00000564260 WFIKKN2Q8TEU8 576 aa17.27■□□□□ 0.36
RNF40-206ENST00000564260 ADAM33Q9BZ11 813 aa17.27■□□□□ 0.36
RNF40-206ENST00000564260 FOXQ1Q9C009 403 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms