RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 FERMT1Q9BQL6 677 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 NT5C1AQ9BXI3 368 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 NRDE2Q9H7Z3 1164 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 SIX4Q9UIU6 781 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 CDH22Q9UJ99 828 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 ZNF180Q9UJW8 692 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 ADAMTS6Q9UKP5 1117 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 MFHAS1Q9Y4C4 1052 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 DOCK5Q9H7D0 1870 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 SDR42E2A6NKP2 422 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 ATP9BO43861 1147 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 MAFO75444 373 aaPredicted RBP12.16□□□□□ -0.46
ABCA3-203ENST00000563623 CPA3P15088 417 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 GARSP41250 739 aaKnown RBP12.16□□□□□ -0.46
ABCA3-203ENST00000563623 CCDC14Q49A88 953 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 TEX44Q53QW1 395 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 TEDDM1Q5T9Z0 273 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 MAP1SQ66K74 1059 aaPredicted RBP12.16□□□□□ -0.46
ABCA3-203ENST00000563623 TRNP1Q6NT89 227 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 PID1Q7Z2X4 250 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 SESTD1Q86VW0 696 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 FAM131BQ86XD5 332 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 PQLC3Q8N755 202 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 COLGALT1Q8NBJ5 622 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 MPP4Q96JB8 637 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 SIGLEC10Q96LC7 697 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 C2orf40Q9H1Z8 148 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 TMEM216Q9P0N5 145 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 HACL1Q9UJ83 578 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 ARHGAP26Q9UNA1 814 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 INPP5FQ9Y2H2 1132 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 PSAT1Q9Y617 370 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 RBBP6Q7Z6E9 1792 aaKnown RBP12.15□□□□□ -0.46
ABCA3-203ENST00000563623 UQCRBP14927 111 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 TFE3P19532 575 aaPredicted RBP12.15□□□□□ -0.46
ABCA3-203ENST00000563623 PRKCHP24723 683 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 MRPS22P82650 360 aaKnown RBP12.15□□□□□ -0.46
ABCA3-203ENST00000563623 FSCBQ5H9T9 825 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 KYAT3Q6YP21 454 aaKnown RBP12.15□□□□□ -0.46
ABCA3-203ENST00000563623 AGBL3Q8NEM8 1001 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 ADAM32Q8TC27 787 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 AZIN2Q96A70 460 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 ZNF669Q96BR6 464 aaPredicted RBP12.15□□□□□ -0.46
ABCA3-203ENST00000563623 KIF12Q96FN5 646 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 TSNARE1Q96NA8 513 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 PLEKHG4BQ96PX9 1271 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 PCYT2Q99447 389 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 APOL2Q9BQE5 337 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 UNKQ9C0B0 810 aaKnown RBP12.15□□□□□ -0.46
ABCA3-203ENST00000563623 GPAMQ9HCL2 828 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 DMAP1Q9NPF5 467 aaPredicted RBP12.15□□□□□ -0.46
ABCA3-203ENST00000563623 DDX18Q9NVP1 670 aaKnown RBP12.15□□□□□ -0.46
ABCA3-203ENST00000563623 POMPQ9Y244 141 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 PCDHA11Q9Y5I1 949 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 GOLGA8TH3BQL2 631 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 GPR25O00155 361 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 ATG7O95352 703 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 TGM2P21980 687 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 IDH3AP50213 366 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 IFRD2Q12894 506 aaPredicted RBP12.15□□□□□ -0.46
ABCA3-203ENST00000563623 PDE1CQ14123 709 aaPredicted RBP12.15□□□□□ -0.46
ABCA3-203ENST00000563623 TMEM132DQ14C87 1099 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 TMCO4Q5TGY1 634 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 OLFML2BQ68BL8 750 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 PACS1Q6VY07 963 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 AP4E1Q9UPM8 1137 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 ANKRD31Q8N7Z5 1873 aa12.15□□□□□ -0.46
ABCA3-203ENST00000563623 BIRC5O15392 142 aa12.15□□□□□ -0.47
ABCA3-203ENST00000563623 PLIN3O60664 434 aa12.15□□□□□ -0.47
ABCA3-203ENST00000563623 CILPO75339 1184 aa12.15□□□□□ -0.47
ABCA3-203ENST00000563623 HMGB2P26583 209 aaKnown RBP12.15□□□□□ -0.47
ABCA3-203ENST00000563623 CRABP2P29373 138 aa12.15□□□□□ -0.47
ABCA3-203ENST00000563623 GABRB2P47870 512 aa12.15□□□□□ -0.47
ABCA3-203ENST00000563623 FOLH1Q04609 750 aa12.15□□□□□ -0.47
ABCA3-203ENST00000563623 OLIG2Q13516 323 aa12.15□□□□□ -0.47
ABCA3-203ENST00000563623 ACAP1Q15027 740 aa12.15□□□□□ -0.47
ABCA3-203ENST00000563623 CYTH1Q15438 398 aa12.15□□□□□ -0.47
ABCA3-203ENST00000563623 PMF1Q6P1K2 205 aa12.15□□□□□ -0.47
ABCA3-203ENST00000563623 FRMD7Q6ZUT3 714 aa12.15□□□□□ -0.47
ABCA3-203ENST00000563623 ARCQ7LC44 396 aa12.15□□□□□ -0.47
ABCA3-203ENST00000563623 DNAJC1Q96KC8 554 aaKnown RBP12.15□□□□□ -0.47
ABCA3-203ENST00000563623 MARK4Q96L34 752 aa12.15□□□□□ -0.47
ABCA3-203ENST00000563623 NIFKQ9BYG3 293 aaKnown RBP12.15□□□□□ -0.47
ABCA3-203ENST00000563623 WDR55Q9H6Y2 383 aaPredicted RBP12.15□□□□□ -0.47
ABCA3-203ENST00000563623 MINDY3Q9H8M7 445 aa12.15□□□□□ -0.47
ABCA3-203ENST00000563623 DNAAF2Q9NVR5 837 aaKnown RBP12.15□□□□□ -0.47
ABCA3-203ENST00000563623 HOXC10Q9NYD6 342 aa12.15□□□□□ -0.47
ABCA3-203ENST00000563623 ACKR2O00590 384 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 FARP2O94887 1054 aaPredicted RBP12.14□□□□□ -0.47
ABCA3-203ENST00000563623 PGK2P07205 417 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 IMPDH2P12268 514 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 PMLP29590 882 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 ABCE1P61221 599 aaKnown RBP12.14□□□□□ -0.47
ABCA3-203ENST00000563623 ACAD11Q709F0 780 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 SNX32Q86XE0 403 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 PYROXD2Q8N2H3 581 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 SPATA33Q96N06 139 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 KCNK16Q96T55 309 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 TSPYL2Q9H2G4 693 aaPredicted RBP12.14□□□□□ -0.47
ABCA3-203ENST00000563623 CAB39LQ9H9S4 337 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms