RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 CCNYQ8ND76 341 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 STKLD1Q8NE28 680 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 DQX1Q8TE96 717 aaKnown RBP19.72■□□□□ 0.75
SMPD3-203ENST00000563226 FRMD8Q9BZ67 464 aaPredicted RBP19.72■□□□□ 0.75
SMPD3-203ENST00000563226 SEPT10Q9P0V9 454 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 NUP205Q92621 2012 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 ARVCFO00192 962 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 MSH2P43246 934 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 GLUD2P49448 558 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 SLC5A3P53794 718 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 WASHC5Q12768 1159 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 GPNMBQ14956 572 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 SLC39A12Q504Y0 691 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 BZW1Q7L1Q6 419 aaKnown RBP19.71■□□□□ 0.75
SMPD3-203ENST00000563226 SPATA2LQ8IUW3 424 aaPredicted RBP19.71■□□□□ 0.75
SMPD3-203ENST00000563226 SMC6Q96SB8 1091 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 CYTH2Q99418 400 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 WDCPQ9H6R7 721 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 PRDM16Q9HAZ2 1276 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 RRN3Q9NYV6 651 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 ZC3H7BQ9UGR2 993 aaKnown RBP19.71■□□□□ 0.75
SMPD3-203ENST00000563226 SHROOM3Q8TF72 1996 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 PRPF4O43172 522 aaKnown RBP eCLIP19.71■□□□□ 0.75
SMPD3-203ENST00000563226 PAX3P23760 479 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 STX2P32856 288 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 PDK1Q15118 436 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 MAPRE1Q15691 268 aaKnown RBP19.71■□□□□ 0.75
SMPD3-203ENST00000563226 LRRC8DQ7L1W4 858 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 PIGWQ7Z7B1 504 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 SPATS2Q86XZ4 545 aaKnown RBP19.71■□□□□ 0.75
SMPD3-203ENST00000563226 COLGALT1Q8NBJ5 622 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 DENND1AQ8TEH3 1009 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 SIGLEC10Q96LC7 697 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 PNPLA8Q9NP80 782 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 FGFR1OP2Q9NVK5 253 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 GGA2Q9UJY4 613 aa19.71■□□□□ 0.75
SMPD3-203ENST00000563226 TET1Q8NFU7 2136 aa19.7■□□□□ 0.74
SMPD3-203ENST00000563226 TNFRSF10BO14763 440 aa19.7■□□□□ 0.74
SMPD3-203ENST00000563226 TYROBPO43914 113 aa19.7■□□□□ 0.74
SMPD3-203ENST00000563226 NBNO60934 754 aa19.7■□□□□ 0.74
SMPD3-203ENST00000563226 KRT4P19013 534 aa19.7■□□□□ 0.74
SMPD3-203ENST00000563226 FOXN2P32314 431 aa19.7■□□□□ 0.74
SMPD3-203ENST00000563226 RPA3P35244 121 aaPredicted RBP19.7■□□□□ 0.74
SMPD3-203ENST00000563226 GRIK1P39086 918 aa19.7■□□□□ 0.74
SMPD3-203ENST00000563226 MICALCLQ6ZW33 695 aa19.7■□□□□ 0.74
SMPD3-203ENST00000563226 SCML4Q8N228 414 aa19.7■□□□□ 0.74
SMPD3-203ENST00000563226 URGCPQ8TCY9 931 aa19.7■□□□□ 0.74
SMPD3-203ENST00000563226 ELAC2Q9BQ52 826 aaKnown RBP19.7■□□□□ 0.74
SMPD3-203ENST00000563226 SENP1Q9P0U3 644 aa19.7■□□□□ 0.74
SMPD3-203ENST00000563226 GRID1Q9ULK0 1009 aa19.7■□□□□ 0.74
SMPD3-203ENST00000563226 CXorf49A8MYA2 514 aaPredicted RBP19.69■□□□□ 0.74
SMPD3-203ENST00000563226 PPP1R12AO14974 1030 aaPredicted RBP19.69■□□□□ 0.74
SMPD3-203ENST00000563226 ASMTLO95671 621 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 F9P00740 461 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 GATMP50440 423 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 ARL13BQ3SXY8 428 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 ZNF567Q8N184 647 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 DEPDC1BQ8WUY9 529 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 SLC44A1Q8WWI5 657 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 CABS1Q96KC9 395 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 KLF6Q99612 283 aaPredicted RBP19.69■□□□□ 0.74
SMPD3-203ENST00000563226 PAIP2Q9BPZ3 127 aaKnown RBP19.69■□□□□ 0.74
SMPD3-203ENST00000563226 SMYD2Q9NRG4 433 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 PIH1D1Q9NWS0 290 aaKnown RBP19.69■□□□□ 0.74
SMPD3-203ENST00000563226 ABI2Q9NYB9 513 aaPredicted RBP19.69■□□□□ 0.74
SMPD3-203ENST00000563226 ATXN2Q99700 1313 aaKnown RBP19.69■□□□□ 0.74
SMPD3-203ENST00000563226 ARHGEF37A1IGU5 675 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 KCNK1O00180 336 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 SPAG6O75602 509 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 FAM155BO75949 473 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 LRIG2O94898 1065 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 IGLV3-25P01717 112 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 PSMB4P28070 264 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 GRK4P32298 578 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 SLC1A5Q15758 541 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 SDHAF4Q5VUM1 108 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 UNC5AQ6ZN44 842 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 C4orf50Q6ZRC1 276 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 PDCD7Q8N8D1 485 aaKnown RBP19.69■□□□□ 0.74
SMPD3-203ENST00000563226 SLAIN1Q8ND83 568 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 SGSM3Q96HU1 749 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 TGS1Q96RS0 853 aaKnown RBP19.69■□□□□ 0.74
SMPD3-203ENST00000563226 HCSTQ9UBK5 93 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 OR12D3Q9UGF7 316 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 PHF24Q9UPV7 400 aa19.69■□□□□ 0.74
SMPD3-203ENST00000563226 TMEM189-UBE2V1I3L0A0 370 aa19.68■□□□□ 0.74
SMPD3-203ENST00000563226 GOLGA8RI6L899 631 aa19.68■□□□□ 0.74
SMPD3-203ENST00000563226 CPP00450 1065 aa19.68■□□□□ 0.74
SMPD3-203ENST00000563226 SELPP16109 830 aa19.68■□□□□ 0.74
SMPD3-203ENST00000563226 HCAR3P49019 387 aa19.68■□□□□ 0.74
SMPD3-203ENST00000563226 GPR15P49685 360 aa19.68■□□□□ 0.74
SMPD3-203ENST00000563226 FAAP100Q0VG06 881 aa19.68■□□□□ 0.74
SMPD3-203ENST00000563226 ZKSCAN8Q15776 578 aaPredicted RBP19.68■□□□□ 0.74
SMPD3-203ENST00000563226 NUGGCQ68CJ6 796 aa19.68■□□□□ 0.74
SMPD3-203ENST00000563226 SCD5Q86SK9 330 aa19.68■□□□□ 0.74
SMPD3-203ENST00000563226 SCN4BQ8IWT1 228 aa19.68■□□□□ 0.74
SMPD3-203ENST00000563226 ZNF296Q8WUU4 475 aaPredicted RBP19.68■□□□□ 0.74
SMPD3-203ENST00000563226 MAGEB18Q96M61 343 aa19.68■□□□□ 0.74
SMPD3-203ENST00000563226 ZCWPW1Q9H0M4 648 aa19.68■□□□□ 0.74
SMPD3-203ENST00000563226 SMG5Q9UPR3 1016 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms