RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 CRABP2P29373 138 aa13.47□□□□□ -0.25
USB1-207ENST00000563149 CPOXP36551 454 aa13.47□□□□□ -0.25
USB1-207ENST00000563149 IREB2P48200 963 aaKnown RBP13.47□□□□□ -0.25
USB1-207ENST00000563149 CDK7P50613 346 aa13.47□□□□□ -0.25
USB1-207ENST00000563149 HIC1Q14526 733 aa13.47□□□□□ -0.25
USB1-207ENST00000563149 RABGAP1LQ5R372 815 aa13.47□□□□□ -0.25
USB1-207ENST00000563149 N4BP2L1Q5TBK1 243 aaPredicted RBP13.47□□□□□ -0.25
USB1-207ENST00000563149 GRTP1Q5TC63 336 aa13.47□□□□□ -0.25
USB1-207ENST00000563149 ERO1BQ86YB8 467 aa13.47□□□□□ -0.25
USB1-207ENST00000563149 SHCBP1Q8NEM2 672 aa13.47□□□□□ -0.25
USB1-207ENST00000563149 TRAPPC9Q96Q05 1148 aa13.47□□□□□ -0.25
USB1-207ENST00000563149 YIPF3Q9GZM5 350 aa13.47□□□□□ -0.25
USB1-207ENST00000563149 SPATS2LQ9NUQ6 558 aaKnown RBP13.47□□□□□ -0.25
USB1-207ENST00000563149 FAM49BQ9NUQ9 324 aa13.47□□□□□ -0.25
USB1-207ENST00000563149 DLGAP2Q9P1A6 1054 aa13.47□□□□□ -0.25
USB1-207ENST00000563149 PDP2Q9P2J9 529 aa13.47□□□□□ -0.25
USB1-207ENST00000563149 MARCOQ9UEW3 520 aaPredicted RBP13.47□□□□□ -0.25
USB1-207ENST00000563149 ADAM28Q9UKQ2 775 aa13.47□□□□□ -0.25
USB1-207ENST00000563149 FZD10Q9ULW2 581 aa13.47□□□□□ -0.25
USB1-207ENST00000563149 TPP1O14773 563 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 ALDOAP04075 364 aaKnown RBP13.46□□□□□ -0.25
USB1-207ENST00000563149 VAV1P15498 845 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 MX2P20592 715 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 PRDX6P30041 224 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 GRIA1P42261 906 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 PDE1CQ14123 709 aaPredicted RBP13.46□□□□□ -0.25
USB1-207ENST00000563149 FRG1Q14331 258 aaKnown RBP13.46□□□□□ -0.25
USB1-207ENST00000563149 Q3C1V9 767 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 CCDC153Q494R4 210 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 SPANXN3Q5MJ09 141 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 C1orf146Q5VVC0 180 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 OR52E8Q6IFG1 317 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 DENND5BQ6ZUT9 1274 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 GPC2Q8N158 579 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 OR6B3Q8NGW1 331 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 PPTC7Q8NI37 304 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 CNKSR2Q8WXI2 1034 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 ARNTL2Q8WYA1 636 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 JADE3Q92613 823 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 ISL2Q96A47 359 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 EMID1Q96A84 441 aaPredicted RBP13.46□□□□□ -0.25
USB1-207ENST00000563149 SNX27Q96L92 541 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 EBF4Q9BQW3 602 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 B3GNT5Q9BYG0 378 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 R3HDMLQ9H3Y0 253 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 PDGFCQ9NRA1 345 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 NDE1Q9NXR1 346 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 IGSF9Q9P2J2 1179 aa13.46□□□□□ -0.25
USB1-207ENST00000563149 A0A088AWK7 358 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.45□□□□□ -0.26
USB1-207ENST00000563149 CCNT2O60583 730 aaKnown RBP13.45□□□□□ -0.26
USB1-207ENST00000563149 PROCP04070 461 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 POLBP06746 335 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 ITGA2BP08514 1039 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 CCDC130P13994 396 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 TFE3P19532 575 aaPredicted RBP13.45□□□□□ -0.26
USB1-207ENST00000563149 GP5P40197 560 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 HARS2P49590 506 aaKnown RBP13.45□□□□□ -0.26
USB1-207ENST00000563149 RPL10AP62906 217 aaKnown RBP13.45□□□□□ -0.26
USB1-207ENST00000563149 CDC42EP1Q00587 391 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 DSG1Q02413 1049 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 PCLAFQ15004 111 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 PDK1Q15118 436 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 SOWAHAQ2M3V2 549 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 CASC4Q6P4E1 433 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 ZCCHC23Q6ZST2 131 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 FBXO27Q8NI29 283 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 CLMNQ96JQ2 1002 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 ZNF778Q96MU6 729 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 TSPAN18Q96SJ8 248 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 TSC22D3Q99576 134 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 CPNE1Q99829 537 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 APOL6Q9BWW8 343 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 SLC24A3Q9HC58 644 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 TXNRD2Q9NNW7 524 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 TXNDC16Q9P2K2 825 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 KCNH4Q9UQ05 1017 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 NME7Q9Y5B8 376 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 WASF2Q9Y6W5 498 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 OTOFQ9HC10 1997 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 RBM47A0AV96 593 aaKnown RBP13.45□□□□□ -0.26
USB1-207ENST00000563149 SPDYE5A6NIY4 337 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 ITM2AO43736 263 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 C6orf222P0C671 652 aaPredicted RBP13.45□□□□□ -0.26
USB1-207ENST00000563149 GOT1P17174 413 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 MGAT1P26572 445 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 MATKP42679 507 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 MAGEA12P43365 314 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 COPAP53621 1224 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 ABCE1P61221 599 aaKnown RBP13.45□□□□□ -0.26
USB1-207ENST00000563149 XIAPP98170 497 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 PDE1BQ01064 536 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 DEUP1Q05D60 604 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 UBAP2LQ14157 1087 aaKnown RBP13.45□□□□□ -0.26
USB1-207ENST00000563149 PCBP1Q15365 356 aaKnown RBP eCLIP13.45□□□□□ -0.26
USB1-207ENST00000563149 SLC25A52Q3SY17 297 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 MDH1BQ5I0G3 518 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 C16orf46Q6P387 395 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 CCDC185Q8N715 623 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 ZNF483Q8TF39 744 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms