RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 LATS1O95835 1130 aa18.1■□□□□ 0.49
CCNDBP1-204ENST00000563065 GPD1P21695 349 aa18.1■□□□□ 0.49
CCNDBP1-204ENST00000563065 SDC4P31431 198 aa18.1■□□□□ 0.49
CCNDBP1-204ENST00000563065 SLC18A3Q16572 532 aa18.1■□□□□ 0.49
CCNDBP1-204ENST00000563065 PIK3R6Q5UE93 754 aa18.1■□□□□ 0.49
CCNDBP1-204ENST00000563065 DCUN1D2Q6PH85 259 aa18.1■□□□□ 0.49
CCNDBP1-204ENST00000563065 FAM131BQ86XD5 332 aa18.1■□□□□ 0.49
CCNDBP1-204ENST00000563065 TMA16Q96EY4 203 aaKnown RBP18.1■□□□□ 0.49
CCNDBP1-204ENST00000563065 BTN2A3PQ96KV6 586 aa18.1■□□□□ 0.49
CCNDBP1-204ENST00000563065 NELL2Q99435 816 aa18.1■□□□□ 0.49
CCNDBP1-204ENST00000563065 PACSIN1Q9BY11 444 aa18.1■□□□□ 0.49
CCNDBP1-204ENST00000563065 TKTL2Q9H0I9 626 aa18.1■□□□□ 0.49
CCNDBP1-204ENST00000563065 PARVAQ9NVD7 372 aa18.1■□□□□ 0.49
CCNDBP1-204ENST00000563065 CCP110O43303 1012 aa18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 AKR1B10O60218 316 aa18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 ENDOD1O94919 500 aa18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 PENKP01210 267 aaPredicted RBP18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 PTPN9P43378 593 aa18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 GALCP54803 685 aa18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 GRSF1Q12849 480 aaKnown RBP eCLIP18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 CCINQ13939 588 aa18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 PPP2R5DQ14738 602 aa18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 MS4A13Q5J8X5 152 aa18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 Q6ZS52 159 aa18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 CFAP52Q8N1V2 620 aa18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 PHTF2Q8N3S3 785 aa18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 ATP6V0D2Q8N8Y2 350 aa18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 FAM172AQ8WUF8 416 aa18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 CLDN23Q96B33 292 aa18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 ARHGEF26Q96DR7 871 aa18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 CCDC42Q96M95 316 aa18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 PRICKLE1Q96MT3 831 aaPredicted RBP18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 PNKPQ96T60 521 aa18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 MAGEB5Q9BZ81 275 aa18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 OSBPL6Q9BZF3 934 aa18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 DNAJC17Q9NVM6 304 aaKnown RBP18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 ARHGEF38Q9NXL2 777 aa18.09■□□□□ 0.49
CCNDBP1-204ENST00000563065 CACNG3O60359 315 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 TBL1XO60907 577 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 PAGE1O75459 146 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 F9P00740 461 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 CISD3P0C7P0 127 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 SLC2A3P11169 496 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 TACR2P21452 398 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 CDC25BP30305 580 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 RDXP35241 583 aaKnown RBP18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 ZNF143P52747 638 aaPredicted RBP18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 HDAC4P56524 1084 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 RPS24P62847 133 aaKnown RBP18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 GAS6Q14393 721 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 MPPE1Q53F39 396 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 C1orf228Q6PIY5 440 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 SND1Q7KZF4 910 aaKnown RBP eCLIP18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 C14orf80Q86SX3 495 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 CHSY1Q86X52 802 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 LGI2Q8N0V4 545 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 CENPIQ92674 756 aaPredicted RBP18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 PRMT1Q99873 361 aaKnown RBP18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 SIK2Q9H0K1 926 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 ARHGEF4Q9NR80 690 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 STIM2Q9P246 746 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 DEC1Q9P2X7 70 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 SLC12A6Q9UHW9 1150 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 HS3ST4Q9Y661 456 aa18.08■□□□□ 0.49
CCNDBP1-204ENST00000563065 TMEM191CA6NGB0 347 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 K7EQS6 105 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 KAT7O95251 611 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 CYBBP04839 570 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 MYBL1P10243 752 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 HOXD9P28356 352 aaPredicted RBP18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 SEC13P55735 322 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 ZNF252P-AS1Q0IIN9 211 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 EMC10Q5UCC4 262 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 PKN3Q6P5Z2 889 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 XPO6Q96QU8 1125 aaKnown RBP18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 POLR3BQ9NW08 1133 aaPredicted RBP18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 FBXO10Q9UK96 956 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 NCAM2O15394 837 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 DRD1P21728 446 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 IRAK1P51617 712 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 AUHQ13825 339 aaKnown RBP18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 BRMS1LQ5PSV4 323 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 FBXL22Q6P050 247 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 STRADAQ7RTN6 431 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 CIR1Q86X95 450 aaPredicted RBP18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 ARFGAP1Q8N6T3 406 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 WFDC5Q8TCV5 224 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 IGSF8Q969P0 613 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 TRIM11Q96F44 468 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 BTBD6Q96KE9 485 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 PANX2Q96RD6 677 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 DDX50Q9BQ39 737 aaKnown RBP18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 ZDHHC4Q9NPG8 344 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 C2orf42Q9NWW7 574 aa18.07■□□□□ 0.48
CCNDBP1-204ENST00000563065 ANKRD62A6NC57 917 aa18.06■□□□□ 0.48
CCNDBP1-204ENST00000563065 TBC1D3BA6NDS4 549 aa18.06■□□□□ 0.48
CCNDBP1-204ENST00000563065 RNF40O75150 1001 aa18.06■□□□□ 0.48
CCNDBP1-204ENST00000563065 APODP05090 189 aa18.06■□□□□ 0.48
CCNDBP1-204ENST00000563065 CYP1A2P05177 515 aa18.06■□□□□ 0.48
CCNDBP1-204ENST00000563065 PSMA2P25787 234 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms