RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 CCDC13Q8IYE1 715 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 ZBED8Q8IZ13 594 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 ANKLE1Q8NAG6 615 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 SPPL2BQ8TCT7 592 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 TFB1MQ8WVM0 346 aaKnown RBP17.09■□□□□ 0.33
PKD1-225ENST00000562297 TTC25Q96NG3 672 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 FBXO44Q9H4M3 255 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 SFMBT1Q9UHJ3 866 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 ZMYND8Q9ULU4 1186 aaPredicted RBP17.09■□□□□ 0.33
PKD1-225ENST00000562297 NR2E3Q9Y5X4 410 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 DOCK4Q8N1I0 1966 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 SMIM23A6NLE4 172 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 H7C4K7 107 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 EIF3HO15372 352 aaKnown RBP eCLIP17.09■□□□□ 0.334e-7■■■□□ 17.6
PKD1-225ENST00000562297 MSI1O43347 362 aaKnown RBP17.09■□□□□ 0.33
PKD1-225ENST00000562297 LRIG2O94898 1065 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 ALDH7A1P49419 539 aaKnown RBP17.09■□□□□ 0.33
PKD1-225ENST00000562297 ATP1A2P50993 1020 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 ARPP19P56211 112 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 ARL4CP56559 192 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 HEATR6Q6AI08 1181 aaKnown RBP17.09■□□□□ 0.33
PKD1-225ENST00000562297 NPWQ8N729 165 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 GPR152Q8TDT2 470 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 HTR3CQ8WXA8 447 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 PAWRQ96IZ0 340 aaKnown RBP17.09■□□□□ 0.33
PKD1-225ENST00000562297 SERPINB12Q96P63 405 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 OXCT2Q9BYC2 517 aaPredicted RBP17.09■□□□□ 0.33
PKD1-225ENST00000562297 OSBPL2Q9H1P3 480 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 NUDT5Q9UKK9 219 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 SLC27A5Q9Y2P5 690 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.09■□□□□ 0.33
PKD1-225ENST00000562297 CLUHO75153 1309 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 METTL18O95568 372 aa17.08■□□□□ 0.33
PKD1-225ENST00000562297 HPDP32754 393 aaPredicted RBP17.08■□□□□ 0.33
PKD1-225ENST00000562297 GLUD2P49448 558 aa17.08■□□□□ 0.33
PKD1-225ENST00000562297 IFI35P80217 286 aaPredicted RBP17.08■□□□□ 0.33
PKD1-225ENST00000562297 SMARCB1Q12824 385 aa17.08■□□□□ 0.33
PKD1-225ENST00000562297 BRMS1LQ5PSV4 323 aa17.08■□□□□ 0.33
PKD1-225ENST00000562297 MSANTD2Q6P1R3 559 aa17.08■□□□□ 0.33
PKD1-225ENST00000562297 C4orf22Q6V702 233 aa17.08■□□□□ 0.33
PKD1-225ENST00000562297 TOP1MTQ969P6 601 aa17.08■□□□□ 0.33
PKD1-225ENST00000562297 PRDM12Q9H4Q4 367 aa17.08■□□□□ 0.33
PKD1-225ENST00000562297 RC3H2Q9HBD1 1191 aaKnown RBP17.08■□□□□ 0.33
PKD1-225ENST00000562297 EURLQ9NYK6 297 aa17.08■□□□□ 0.33
PKD1-225ENST00000562297 SLC12A6Q9UHW9 1150 aa17.08■□□□□ 0.33
PKD1-225ENST00000562297 RGS16O15492 202 aaPredicted RBP17.08■□□□□ 0.32
PKD1-225ENST00000562297 ADAM12O43184 909 aa17.08■□□□□ 0.32
PKD1-225ENST00000562297 AGTP01019 485 aa17.08■□□□□ 0.32
PKD1-225ENST00000562297 HAPLN1P10915 354 aaPredicted RBP17.08■□□□□ 0.32
PKD1-225ENST00000562297 PPP2R5DQ14738 602 aa17.08■□□□□ 0.32
PKD1-225ENST00000562297 PDK1Q15118 436 aa17.08■□□□□ 0.32
PKD1-225ENST00000562297 ZSCAN26Q16670 478 aa17.08■□□□□ 0.32
PKD1-225ENST00000562297 FAXCQ5TGI0 409 aa17.08■□□□□ 0.32
PKD1-225ENST00000562297 SLC8B1Q6J4K2 584 aa17.08■□□□□ 0.32
PKD1-225ENST00000562297 DENND5BQ6ZUT9 1274 aa17.08■□□□□ 0.32
PKD1-225ENST00000562297 ZNF689Q96CS4 500 aaPredicted RBP17.08■□□□□ 0.32
PKD1-225ENST00000562297 IGSF21Q96ID5 467 aa17.08■□□□□ 0.32
PKD1-225ENST00000562297 SPATA17Q96L03 361 aa17.08■□□□□ 0.32
PKD1-225ENST00000562297 HAPLN3Q96S86 360 aa17.08■□□□□ 0.32
PKD1-225ENST00000562297 EPAS1Q99814 870 aa17.08■□□□□ 0.32
PKD1-225ENST00000562297 KLC2Q9H0B6 622 aa17.08■□□□□ 0.32
PKD1-225ENST00000562297 ETNK1Q9HBU6 452 aa17.08■□□□□ 0.32
PKD1-225ENST00000562297 GMIPQ9P107 970 aa17.08■□□□□ 0.32
PKD1-225ENST00000562297 CDY1Q9Y6F8 540 aa17.08■□□□□ 0.32
PKD1-225ENST00000562297 KCNU1A8MYU2 1149 aa17.07■□□□□ 0.32
PKD1-225ENST00000562297 GPX6P59796 221 aa17.07■□□□□ 0.32
PKD1-225ENST00000562297 STAT4Q14765 748 aa17.07■□□□□ 0.32
PKD1-225ENST00000562297 USP41Q3LFD5 358 aa17.07■□□□□ 0.32
PKD1-225ENST00000562297 SYCP2LQ5T4T6 812 aa17.07■□□□□ 0.32
PKD1-225ENST00000562297 MANEALQ5VSG8 457 aa17.07■□□□□ 0.32
PKD1-225ENST00000562297 ANKMY2Q8IV38 441 aa17.07■□□□□ 0.32
PKD1-225ENST00000562297 PDIK1LQ8N165 341 aa17.07■□□□□ 0.32
PKD1-225ENST00000562297 AGGF1Q8N302 714 aaeCLIP17.07■□□□□ 0.32
PKD1-225ENST00000562297 FBXO22Q8NEZ5 403 aa17.07■□□□□ 0.32
PKD1-225ENST00000562297 C2orf15Q8WU43 125 aaKnown RBP17.07■□□□□ 0.32
PKD1-225ENST00000562297 RNF34Q969K3 372 aa17.07■□□□□ 0.32
PKD1-225ENST00000562297 P2RY11Q96G91 374 aa17.07■□□□□ 0.32
PKD1-225ENST00000562297 CAPS2Q9BXY5 557 aa17.07■□□□□ 0.32
PKD1-225ENST00000562297 C11orf49Q9H6J7 331 aa17.07■□□□□ 0.32
PKD1-225ENST00000562297 MTRRQ9UBK8 725 aa17.07■□□□□ 0.32
PKD1-225ENST00000562297 RAD54BQ9Y620 910 aa17.07■□□□□ 0.32
PKD1-225ENST00000562297 KIAA1671Q9BY89 1806 aa17.07■□□□□ 0.32
PKD1-225ENST00000562297 A0A087WUV0 522 aaPredicted RBP17.06■□□□□ 0.32
PKD1-225ENST00000562297 A0A0A0MRY4 1105 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 ABHD14A-ACY1A0A1B0GW23 586 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 WDR27A2RRH5 827 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 TRIM43BA6NCK2 446 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 PAGE1O75459 146 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 CCR1P32246 355 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 PPP2R2AP63151 447 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 DUSP4Q13115 394 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 MTM1Q13496 603 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 SKIDA1Q1XH10 827 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 LEKR1Q6ZMV7 388 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 TMCO2Q7Z6W1 182 aaPredicted RBP17.06■□□□□ 0.32
PKD1-225ENST00000562297 DNAJC5GQ8N7S2 189 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 TRIM43Q96BQ3 446 aaPredicted RBP17.06■□□□□ 0.32
PKD1-225ENST00000562297 SLC39A13Q96H72 371 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 SPATA13Q96N96 652 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 CTNNAL1Q9UBT7 734 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms