RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 SCAPQ12770 1279 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 SLC10A2Q12908 348 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-210ENST00000561817 HLTFQ14527 1009 aaKnown RBP eCLIP6.78□□□□□ -1.32
CAPN3-210ENST00000561817 NOMO1Q15155 1222 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 DCAF6Q58WW2 860 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 ANKRD20A8PQ5CZ79 823 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 ERMARDQ5T6L9 678 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 HIBCHQ6NVY1 386 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-210ENST00000561817 FUT10Q6P4F1 479 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 CNKSR3Q6P9H4 555 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 NPNTQ6UXI9 565 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 TAS1R1Q7RTX1 841 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 UBE2Q1Q7Z7E8 422 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 SCD5Q86SK9 330 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 RFX6Q8HWS3 928 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 SIX6OS1Q8N1H7 587 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 SDR16C5Q8N3Y7 309 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 SCAMP5Q8TAC9 235 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 NTAN1Q96AB6 310 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 TRIM43Q96BQ3 446 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-210ENST00000561817 HAUS1Q96CS2 278 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 ZNF689Q96CS4 500 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-210ENST00000561817 RTP4Q96DX8 246 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 SNF8Q96H20 258 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 FUBP3Q96I24 572 aaKnown RBP eCLIP6.78□□□□□ -1.32
CAPN3-210ENST00000561817 C8orf48Q96LL4 319 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 CSPG4P5Q96PW8 444 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 SLC9A7Q96T83 725 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 FMO2Q99518 471 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 LBHD1Q9BQE6 289 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-210ENST00000561817 OCSTAMPQ9BR26 566 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 COLEC11Q9BWP8 271 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 C10orf88Q9H8K7 445 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 USP29Q9HBJ7 922 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 LRRC4CQ9HCJ2 640 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 TMPRSS4Q9NRS4 437 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 PIGVQ9NUD9 493 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 CWC15Q9P013 229 aaKnown RBP6.78□□□□□ -1.32
CAPN3-210ENST00000561817 EGFL7Q9UHF1 273 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 FEZ2Q9UHY8 353 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-210ENST00000561817 TNRC18O15417 2968 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-210ENST00000561817 GREB1Q4ZG55 1949 aa6.78□□□□□ -1.32
CAPN3-210ENST00000561817 ZNF638Q14966 1978 aaKnown RBP6.77□□□□□ -1.33
CAPN3-210ENST00000561817 TBKBP1A7MCY6 615 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 DNALI1O14645 258 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-210ENST00000561817 TRAPPC3O43617 180 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 TADA2AO75478 443 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 GAS8O95995 478 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 ALDH2P05091 517 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 TGM2P21980 687 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 RDXP35241 583 aaKnown RBP6.77□□□□□ -1.33
CAPN3-210ENST00000561817 RPL22P35268 128 aaKnown RBP6.77□□□□□ -1.33
CAPN3-210ENST00000561817 ADRA1BP35368 520 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 CHKAP35790 457 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 PBX3P40426 434 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 GPR15P49685 360 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 ITGA8P53708 1063 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 SLC5A3P53794 718 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 GDF10P55107 478 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 BCAR1P56945 870 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 DYNLT1P63172 113 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 CBX1P83916 185 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 RELBQ01201 579 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 LMNB2Q03252 620 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 DPYSQ14117 519 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 TFDP2Q14188 446 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 PPP1R7Q15435 360 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 TRIP13Q15645 432 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-210ENST00000561817 SLC39A12Q504Y0 691 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 TTMPQ5BVD1 217 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 RTP2Q5QGT7 225 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 RNASEH2BQ5TBB1 312 aaKnown RBP6.77□□□□□ -1.33
CAPN3-210ENST00000561817 FAM171A1Q5VUB5 890 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 BSPRYQ5W0U4 402 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 SCYL2Q6P3W7 929 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 VSTM1Q6UX27 236 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 LRIG3Q6UXM1 1119 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 C4orf50Q6ZRC1 276 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 DEFB128Q7Z7B8 93 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 TAC4Q86UU9 113 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 FAM131BQ86XD5 332 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 RELL1Q8IUW5 271 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 MAP7D3Q8IWC1 876 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 UNC45BQ8IWX7 931 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 DCP1BQ8IZD4 617 aaKnown RBP6.77□□□□□ -1.33
CAPN3-210ENST00000561817 ABI1Q8IZP0 508 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 PYROXD2Q8N2H3 581 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 TTC9BQ8N6N2 239 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 CCDC89Q8N998 374 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 NANOS1Q8WY41 292 aaKnown RBP6.77□□□□□ -1.33
CAPN3-210ENST00000561817 RIN2Q8WYP3 895 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-210ENST00000561817 BADQ92934 168 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 RNF34Q969K3 372 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 ARL8AQ96BM9 186 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 FAM149B1Q96BN6 582 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 LRRC45Q96CN5 670 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 B3GALT6Q96L58 329 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 FAM193BQ96PV7 902 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-210ENST00000561817 TMEM121Q9BTD3 319 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 CALN1Q9BXU9 219 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms