RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 FAM149B1Q96BN6 582 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 FCRL2Q96LA5 508 aaPredicted RBP10.7□□□□□ -0.7
CLK3-205ENST00000561673 FAM81BQ96LP2 452 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 THAP9Q9H5L6 903 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 PRDM16Q9HAZ2 1276 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 ABCB8Q9NUT2 735 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 EVLQ9UI08 416 aaPredicted RBP10.7□□□□□ -0.7
CLK3-205ENST00000561673 TLR6Q9Y2C9 796 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 SPTBN2O15020 2390 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 ASPMQ8IZT6 3477 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 IRAK2O43187 625 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 SART1O43290 800 aaKnown RBP10.69□□□□□ -0.7
CLK3-205ENST00000561673 COPAP53621 1224 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 ARID5AQ03989 594 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 NNTQ13423 1086 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 E2F5Q15329 346 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 TAF5Q15542 800 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 DPCR1Q3MIW9 517 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 MPP7Q5T2T1 576 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 N4BP2L1Q5TBK1 243 aaPredicted RBP10.69□□□□□ -0.7
CLK3-205ENST00000561673 SLC23A3Q6PIS1 610 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 SERPINA13PQ6UXR4 307 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 CHST9Q7L1S5 443 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 BEND5Q7L4P6 421 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 METTL3Q86U44 580 aaKnown RBP10.69□□□□□ -0.7
CLK3-205ENST00000561673 TAC4Q86UU9 113 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 TMPRSS6Q8IU80 811 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 SLC41A1Q8IVJ1 513 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 WDTC1Q8N5D0 677 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.69□□□□□ -0.7
CLK3-205ENST00000561673 WFDC5Q8TCV5 224 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 CYB5D2Q8WUJ1 264 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 SHC3Q92529 594 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 MYEOVQ96EZ4 313 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 SLC39A13Q96H72 371 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 ZNF419Q96HQ0 510 aaPredicted RBP10.69□□□□□ -0.7
CLK3-205ENST00000561673 SERPINB11Q96P15 392 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 NUSAP1Q9BXS6 441 aaKnown RBP10.69□□□□□ -0.7
CLK3-205ENST00000561673 TMEM245Q9H330 911 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 SIX2Q9NPC8 291 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 TMEM9BQ9NQ34 198 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 FSCN3Q9NQT6 498 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 ITM2CQ9NQX7 267 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 STIM2Q9P246 746 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 TJP2Q9UDY2 1190 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 GGA2Q9UJY4 613 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 AJAP1Q9UKB5 411 aaPredicted RBP10.69□□□□□ -0.7
CLK3-205ENST00000561673 PLA2G4CQ9UP65 541 aa10.69□□□□□ -0.7
CLK3-205ENST00000561673 THADAQ6YHU6 1953 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 KCNJ18B7U540 433 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 FOXN3O00409 490 aaPredicted RBP10.68□□□□□ -0.7
CLK3-205ENST00000561673 CAPN9O14815 690 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 NDUFS2O75306 463 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 KCNK5O95279 499 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 CFIP05156 583 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 EPHX1P07099 455 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 PABPC1P11940 636 aaKnown RBP10.68□□□□□ -0.7
CLK3-205ENST00000561673 HLA-EP13747 358 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 ENGP17813 658 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 ERCC5P28715 1186 aaPredicted RBP10.68□□□□□ -0.7
CLK3-205ENST00000561673 CD6P30203 668 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 CD70P32970 193 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 HOXD12P35452 270 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 CLCN1P35523 988 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 DPP6P42658 865 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 TPMTP51580 245 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 RPS24P62847 133 aaKnown RBP10.68□□□□□ -0.7
CLK3-205ENST00000561673 YWHAZP63104 245 aaKnown RBP10.68□□□□□ -0.7
CLK3-205ENST00000561673 LMAN2Q12907 356 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 PDCLQ13371 301 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 MAN2A1Q16706 1144 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 PTPRNQ16849 979 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 DUOXA1Q1HG43 343 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 VWA3BQ502W6 1294 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 FNDC3BQ53EP0 1204 aaKnown RBP10.68□□□□□ -0.7
CLK3-205ENST00000561673 HSP90AA4PQ58FG1 418 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 ZC3H12AQ5D1E8 599 aaKnown RBP10.68□□□□□ -0.7
CLK3-205ENST00000561673 MIIPQ5JXC2 388 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 DAB2IPQ5VWQ8 1189 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 MBLAC2Q68D91 279 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 DPY19L2P1Q6NXN4 242 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 AHI1Q8N157 1196 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 FIBINQ8TAL6 211 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 CEP76Q8TAP6 659 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 WFIKKN2Q8TEU8 576 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 PRCCQ92733 491 aaPredicted RBP10.68□□□□□ -0.7
CLK3-205ENST00000561673 SIPA1Q96FS4 1042 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 TOE1Q96GM8 510 aaKnown RBP10.68□□□□□ -0.7
CLK3-205ENST00000561673 LMLNQ96KR4 655 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 HSPA12BQ96MM6 686 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 PRICKLE1Q96MT3 831 aaPredicted RBP10.68□□□□□ -0.7
CLK3-205ENST00000561673 CPXM1Q96SM3 734 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 TRIM62Q9BVG3 475 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 IRX2Q9BZI1 471 aaPredicted RBP10.68□□□□□ -0.7
CLK3-205ENST00000561673 NUCKS1Q9H1E3 243 aaKnown RBP10.68□□□□□ -0.7
CLK3-205ENST00000561673 NUP62CLQ9H1M0 184 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 NDST4Q9H3R1 872 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 POPDC2Q9HBU9 364 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 WSB2Q9NYS7 404 aaPredicted RBP10.68□□□□□ -0.7
CLK3-205ENST00000561673 USP36Q9P275 1121 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms