RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 SLC2A13Q96QE2 648 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 TBCBQ99426 244 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 IER2Q9BTL4 223 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 HAUS4Q9H6D7 363 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 ABCB8Q9NUT2 735 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.5□□□□□ -0.73
HERC1-212ENST00000561348 ZSCAN32Q9NX65 697 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 CACNA2D2Q9NY47 1150 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 MARK1Q9P0L2 795 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 RAB23Q9ULC3 237 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 RAD54BQ9Y620 910 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 TCRBV21S2A2A0A5A6 115 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 ANKRD62A6NC57 917 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 KCNU1A8MYU2 1149 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 WASH3PC4AMC7 463 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 PRRT4C9JH25 899 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 F5H5T6 163 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 SGK1O00141 431 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 CBFA2T2O43439 604 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 GFRA3O60609 400 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 IGLV3-27P01718 113 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 CYP1A1P04798 512 aaPredicted RBP10.49□□□□□ -0.73
HERC1-212ENST00000561348 SLC2A3P11169 496 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 PDGFRAP16234 1089 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 TACR2P21452 398 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 FLT3P36888 993 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 ATXN1P54253 815 aaKnown RBP10.49□□□□□ -0.73
HERC1-212ENST00000561348 MRPS21P82921 87 aaKnown RBP10.49□□□□□ -0.73
HERC1-212ENST00000561348 RING1Q06587 406 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 SIM2Q14190 667 aaPredicted RBP10.49□□□□□ -0.73
HERC1-212ENST00000561348 FAM133BQ5BKY9 247 aaKnown RBP10.49□□□□□ -0.73
HERC1-212ENST00000561348 EOGTQ5NDL2 527 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 PIK3R6Q5UE93 754 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 NADSYN1Q6IA69 706 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 DNAJC24Q6P3W2 148 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 SCYL2Q6P3W7 929 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 DCUN1D2Q6PH85 259 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 CHST9Q7L1S5 443 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 SYT13Q7L8C5 426 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 IRF2BP2Q7Z5L9 587 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 ANKS1BQ7Z6G8 1248 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 CACUL1Q86Y37 369 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 IL17RCQ8NAC3 791 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 HJURPQ8NCD3 748 aaPredicted RBP10.49□□□□□ -0.73
HERC1-212ENST00000561348 CYB5D2Q8WUJ1 264 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 UCMAQ8WVF2 138 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 HMGB4Q8WW32 186 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 RXFP2Q8WXD0 754 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 BTN2A3PQ96KV6 586 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 RPRD1AQ96P16 312 aaPredicted RBP10.49□□□□□ -0.73
HERC1-212ENST00000561348 ACOX2Q99424 681 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 NUP58Q9BVL2 599 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 TKTL2Q9H0I9 626 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 WDCPQ9H6R7 721 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 POLMQ9NP87 494 aaPredicted RBP10.49□□□□□ -0.73
HERC1-212ENST00000561348 PRMT8Q9NR22 394 aaPredicted RBP10.49□□□□□ -0.73
HERC1-212ENST00000561348 TMPRSS4Q9NRS4 437 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 PIGVQ9NUD9 493 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 ASNSD1Q9NWL6 643 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 VANGL2Q9ULK5 521 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 ARIH1Q9Y4X5 557 aaPredicted RBP10.49□□□□□ -0.73
HERC1-212ENST00000561348 SNX10Q9Y5X0 201 aa10.49□□□□□ -0.73
HERC1-212ENST00000561348 K7ESF4 209 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 AXIN1O15169 862 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 ATMINO43313 823 aaPredicted RBP10.48□□□□□ -0.73
HERC1-212ENST00000561348 SRGAP2O75044 1071 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 PAGE1O75459 146 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 ALDH1A2O94788 518 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 ADCY5O95622 1261 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 APBB3O95704 486 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 PENKP01210 267 aaPredicted RBP10.48□□□□□ -0.73
HERC1-212ENST00000561348 CALB1P05937 261 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 CISD3P0C7P0 127 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 KRT3P12035 628 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 UNGP13051 313 aaPredicted RBP10.48□□□□□ -0.73
HERC1-212ENST00000561348 HOXB2P14652 356 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 MMP8P22894 467 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 HOXD9P28356 352 aaPredicted RBP10.48□□□□□ -0.73
HERC1-212ENST00000561348 NTSR1P30989 418 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 SDC4P31431 198 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 CASP14P31944 242 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 GABRB2P47870 512 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 C15orf59Q2T9L4 293 aaPredicted RBP10.48□□□□□ -0.73
HERC1-212ENST00000561348 ZNF528Q3MIS6 628 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 FNDC3BQ53EP0 1204 aaKnown RBP10.48□□□□□ -0.73
HERC1-212ENST00000561348 MS4A13Q5J8X5 152 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 E4F1Q66K89 784 aaPredicted RBP10.48□□□□□ -0.73
HERC1-212ENST00000561348 TMEM92Q6UXU6 159 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 TRMT11Q7Z4G4 463 aaKnown RBP10.48□□□□□ -0.73
HERC1-212ENST00000561348 LONP2Q86WA8 852 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 FAM131BQ86XD5 332 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 PHTF2Q8N3S3 785 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 ZNF366Q8N895 744 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 JOSD2Q8TAC2 188 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 MYEOVQ96EZ4 313 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 SLC39A13Q96H72 371 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 TRIM5Q9C035 493 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 TAS2R14Q9NYV8 317 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 NCDNQ9UBB6 729 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 MYO1AQ9UBC5 1043 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms