RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 GJB6O95452 261 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 MOCS2O96007 188 aaPredicted RBP15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 CYBBP04839 570 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 GBP1P32455 592 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 TIE1P35590 1138 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 CXCR3P49682 368 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 DMC1Q14565 340 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 PPP2R5DQ14738 602 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 ASIC2Q16515 512 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 GEN1Q17RS7 908 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 SLC25A52Q3SY17 297 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 HSF5Q4G112 596 aaPredicted RBP15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 PREPLQ4J6C6 727 aaPredicted RBP15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 MS4A13Q5J8X5 152 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 C10orf76Q5T2E6 689 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 MPP7Q5T2T1 576 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 HGSNATQ68CP4 663 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 KIAA0907Q7Z7F0 614 aaPredicted RBP15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 CCDC33Q8N5R6 958 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 ALLCQ8N6M5 410 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 WFDC5Q8TCV5 224 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 KCNV2Q8TDN2 545 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 ACDQ96AP0 544 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 LMLNQ96KR4 655 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 BTN2A3PQ96KV6 586 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 TBCBQ99426 244 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 ANLNQ9NQW6 1124 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 PIGVQ9NUD9 493 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 ADAM22Q9P0K1 906 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 CAPN11Q9UMQ6 739 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 PCDHGA2Q9Y5H1 932 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 SYNJ2BP-COX16A0A087WUM0 186 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 SGK1O00141 431 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 ENDOD1O94919 500 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 KLF8O95600 359 aaPredicted RBP15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 APOEP02649 317 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 GYPCP04921 128 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 SKILP12757 684 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 TACR2P21452 398 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 TNFAIP3P21580 790 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 HLA-FP30511 346 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 CCR1P32246 355 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 NSFP46459 744 aaKnown RBP15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 FNTBP49356 437 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 ATXN1P54253 815 aaKnown RBP15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 RPS24P62847 133 aaKnown RBP15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 C1QBPQ07021 282 aaKnown RBP15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 ARTNQ5T4W7 220 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 EGFLAMQ63HQ2 1017 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 TMEM215Q68D42 235 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 ACAD10Q6JQN1 1059 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 TMEM92Q6UXU6 159 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 MCOLN2Q8IZK6 566 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 EMC1Q8N766 993 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 ATP6V0D2Q8N8Y2 350 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 JOSD2Q8TAC2 188 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 SYN2Q92777 582 aaPredicted RBP15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 ACOX2Q99424 681 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 METTL5Q9NRN9 209 aaKnown RBP15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 ARHGEF38Q9NXL2 777 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 COX16Q9P0S2 106 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 STAP1Q9ULZ2 295 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 ITIH6Q6UXX5 1313 aa15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 PTPRZ1P23471 2315 aaPredicted RBP15.83■□□□□ 0.12
SNRPA1-213ENST00000560856 OTOGLQ3ZCN5 2332 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 EP300Q09472 2414 aaPredicted RBP15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 C2CD4BA6NLJ0 364 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 DDX3XO00571 662 aaKnown RBP eCLIP15.82■□□□□ 0.122e-19■■■□□ 18.1
SNRPA1-213ENST00000560856 TBL1XO60907 577 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 ADCY5O95622 1261 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 SLC2A3P11169 496 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 SULT1E1P49888 294 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 NRLP54845 237 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 ZBED6P86452 979 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 NME3Q13232 169 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 CRY1Q16526 586 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 RAB6CQ53S08 254 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 RAP1GAP2Q684P5 730 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 NUDT18Q6ZVK8 323 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 CAMKK1Q8N5S9 505 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 ZNF513Q8N8E2 541 aaPredicted RBP15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 TXNDC5Q8NBS9 432 aaKnown RBP15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 C3orf20Q8ND61 904 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 RXFP2Q8WXD0 754 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 IQCDQ96DY2 449 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 CFAP57Q96MR6 1250 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 HHIPQ96QV1 700 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 DDX50Q9BQ39 737 aaKnown RBP15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 RAB6CQ9H0N0 254 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 CD248Q9HCU0 757 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 SEPT11Q9NVA2 429 aaKnown RBP15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 SLC8A2Q9UPR5 921 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 FAM186AA6NE01 2351 aa15.82■□□□□ 0.12
SNRPA1-213ENST00000560856 CCDC163A0A0D9SF12 145 aa15.81■□□□□ 0.12
SNRPA1-213ENST00000560856 SIGLEC16A6NMB1 481 aa15.81■□□□□ 0.12
SNRPA1-213ENST00000560856 AP5Z1O43299 807 aa15.81■□□□□ 0.12
SNRPA1-213ENST00000560856 F9P00740 461 aa15.81■□□□□ 0.12
SNRPA1-213ENST00000560856 CALB1P05937 261 aa15.81■□□□□ 0.12
SNRPA1-213ENST00000560856 GZMAP12544 262 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms