RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 SKOR2Q2VWA4 1001 aaPredicted RBP13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 FAM133BQ5BKY9 247 aaKnown RBP13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 PIK3R6Q5UE93 754 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 RAP1GAP2Q684P5 730 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 SND1Q7KZF4 910 aaKnown RBP eCLIP13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 SLC26A9Q7LBE3 791 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 APTXQ7Z2E3 356 aaKnown RBP13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 CHSY1Q86X52 802 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 MFN1Q8IWA4 741 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 LGI2Q8N0V4 545 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 CARNMT1Q8N4J0 409 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 HJURPQ8NCD3 748 aaPredicted RBP13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 AZIN2Q96A70 460 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 BTN2A3PQ96KV6 586 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 SLC2A13Q96QE2 648 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 ACOX2Q99424 681 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 ABCB8Q9NUT2 735 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 EBF1Q9UH73 591 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 NOCTQ9UK39 431 aaKnown RBP13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 STAP1Q9ULZ2 295 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 USP18Q9UMW8 372 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 MYO18AQ92614 2054 aaKnown RBP13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 WASH3PC4AMC7 463 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 DCLK1O15075 740 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 MAP3K13O43283 966 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 DAB1O75553 588 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 CCDC172P0C7W6 258 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 HNRNPLP14866 589 aaKnown RBP eCLIP13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 CDH5P33151 784 aaPredicted RBP13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 NOS2P35228 1153 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 MATKP42679 507 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 SULT1E1P49888 294 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 NOMO3P69849 1222 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 CDH18Q13634 790 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 STARD3Q14849 445 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 E2F5Q15329 346 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 ELF2Q15723 593 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 NADSYN1Q6IA69 706 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 LUZP1Q86V48 1076 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 KBTBD6Q86V97 674 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 CFAP52Q8N1V2 620 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 FAM160A2Q8N612 972 aaPredicted RBP13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 SLC30A5Q8TAD4 765 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 SLC39A13Q96H72 371 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 FUCA2Q9BTY2 467 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 NUCKS1Q9H1E3 243 aaKnown RBP13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 CBX8Q9HC52 389 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 RTN4Q9NQC3 1192 aaKnown RBP13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 ELOVL2Q9NXB9 296 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 XPO7Q9UIA9 1087 aaKnown RBP13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 GGA2Q9UJY4 613 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 PLA2G4CQ9UP65 541 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 RAD54BQ9Y620 910 aa13.45□□□□□ -0.26
CTDSPL2-209ENST00000560620 KCNU1A8MYU2 1149 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 F5H5T6 163 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 H0Y626 953 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 SYNCRIPO60506 623 aaKnown RBP13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 RETP07949 1114 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 TACR2P21452 398 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 HLA-FP30511 346 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 NSFP46459 744 aaKnown RBP13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 GABRB2P47870 512 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 RPS24P62847 133 aaKnown RBP13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 FMO1Q01740 532 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 DEUP1Q05D60 604 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 SPEM2Q0P670 501 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 IQCB1Q15051 598 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 EIF4HQ15056 248 aaKnown RBP13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 ZSCAN23Q3MJ62 389 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 FNDC3BQ53EP0 1204 aaKnown RBP13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 MS4A13Q5J8X5 152 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 MPP7Q5T2T1 576 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 SERPINA13PQ6UXR4 307 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 TRIM72Q6ZMU5 477 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 MMS22LQ6ZRQ5 1243 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 CHST9Q7L1S5 443 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 PHLDB2Q86SQ0 1253 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 RASSF3Q86WH2 238 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 XYLT1Q86Y38 959 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 AHI1Q8N157 1196 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 ZNF557Q8N988 423 aaPredicted RBP13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 ZNF397Q8NF99 534 aaPredicted RBP13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 RLN3Q8WXF3 142 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 SORCS1Q8WY21 1168 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 SPACA7Q96KW9 195 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 PRICKLE1Q96MT3 831 aaPredicted RBP13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 C11orf70Q9BRQ4 267 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 RRN3Q9NYV6 651 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 HCN2Q9UL51 889 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 STON1Q9Y6Q2 735 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 FRYLO94915 3013 aa13.44□□□□□ -0.26
CTDSPL2-209ENST00000560620 GFRA2O00451 464 aa13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 NPC1O15118 1278 aa13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 TIMM44O43615 452 aa13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 RHOBTB1O94844 696 aa13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 IGLV3-25P01717 112 aa13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 ATP5BP06576 529 aaKnown RBP13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 EPHX1P07099 455 aa13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 PABPC1P11940 636 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms