RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 SMARCD1Q96GM5 515 aa10.02□□□□□ -0.81
RTF1-206ENST00000560447 SIGLEC10Q96LC7 697 aa10.02□□□□□ -0.81
RTF1-206ENST00000560447 VAT1Q99536 393 aa10.02□□□□□ -0.81
RTF1-206ENST00000560447 ACBD6Q9BR61 282 aa10.02□□□□□ -0.81
RTF1-206ENST00000560447 MED10Q9BTT4 135 aa10.02□□□□□ -0.81
RTF1-206ENST00000560447 RAB6CQ9H0N0 254 aa10.02□□□□□ -0.81
RTF1-206ENST00000560447 C10orf88Q9H8K7 445 aa10.02□□□□□ -0.81
RTF1-206ENST00000560447 RRAGCQ9HB90 399 aa10.02□□□□□ -0.81
RTF1-206ENST00000560447 CSNK1G1Q9HCP0 422 aa10.02□□□□□ -0.81
RTF1-206ENST00000560447 SLC40A1Q9NP59 571 aa10.02□□□□□ -0.81
RTF1-206ENST00000560447 ARHGEF4Q9NR80 690 aa10.02□□□□□ -0.81
RTF1-206ENST00000560447 KLC4Q9NSK0 619 aa10.02□□□□□ -0.81
RTF1-206ENST00000560447 DDX43Q9NXZ2 648 aaKnown RBP10.02□□□□□ -0.81
RTF1-206ENST00000560447 IGSF9Q9P2J2 1179 aa10.02□□□□□ -0.81
RTF1-206ENST00000560447 ST3GAL5Q9UNP4 418 aa10.02□□□□□ -0.81
RTF1-206ENST00000560447 A0A1W2PPM1 405 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 C2CD2LO14523 706 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 DCLK1O15075 740 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 SEPT4O43236 478 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 PSMD3O43242 534 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 MGRN1O60291 552 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 LPXNO60711 386 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 BANF1O75531 89 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 CABYRO75952 493 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 ALDH1A2O94788 518 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 APRTP07741 180 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 C6orf222P0C671 652 aaPredicted RBP10.01□□□□□ -0.81
RTF1-206ENST00000560447 CCNB1P14635 433 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 MX2P20592 715 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 HNRNPH1P31943 449 aaKnown RBP10.01□□□□□ -0.81
RTF1-206ENST00000560447 SERPINB6P35237 376 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 ADRA1BP35368 520 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 ETV4P43268 484 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 RASSF2P50749 326 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 TKTL1P51854 596 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 FCGRTP55899 365 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 GBE1Q04446 702 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 GAD2Q05329 585 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 GRIK3Q13003 919 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 SEMA3BQ13214 749 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 DPYSQ14117 519 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 SLC1A5Q15758 541 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 KBTBD12Q3ZCT8 623 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 DCAF6Q58WW2 860 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 FAM26DQ5JW98 314 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 GNASQ5JWF2 1037 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 ANKRD20A2Q5SQ80 823 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 ANKRD20A1Q5TYW2 823 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 ANKRD20A3Q5VUR7 823 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 OTUD1Q5VV17 481 aaPredicted RBP10.01□□□□□ -0.81
RTF1-206ENST00000560447 WSCD1Q658N2 575 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 CGB2Q6NT52 195 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 DSTYKQ6XUX3 929 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 MARK2Q7KZI7 788 aaKnown RBP10.01□□□□□ -0.81
RTF1-206ENST00000560447 GSTCDQ8NEC7 633 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 TCP10LQ8TDR4 215 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 CLEC4CQ8WTT0 213 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 CDKL2Q92772 493 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 PPP1R2P1Q96PQ5 205 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 SAR1AQ9NR31 198 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 TRHDEQ9UKU6 1024 aa10.01□□□□□ -0.81
RTF1-206ENST00000560447 RPL26L1Q9UNX3 145 aaKnown RBP10.01□□□□□ -0.81
RTF1-206ENST00000560447 FNDC1Q4ZHG4 1894 aaPredicted RBP10□□□□□ -0.81
RTF1-206ENST00000560447 NLRC5Q86WI3 1866 aa10□□□□□ -0.81
RTF1-206ENST00000560447 SDR42E2A6NKP2 422 aa10□□□□□ -0.81
RTF1-206ENST00000560447 M0QYT0 321 aa10□□□□□ -0.81
RTF1-206ENST00000560447 M0QZQ0 153 aa10□□□□□ -0.81
RTF1-206ENST00000560447 EEF2KO00418 725 aaKnown RBP10□□□□□ -0.81
RTF1-206ENST00000560447 COPEO14579 308 aa10□□□□□ -0.81
RTF1-206ENST00000560447 CAPN9O14815 690 aa10□□□□□ -0.81
RTF1-206ENST00000560447 CHUKO15111 745 aa10□□□□□ -0.81
RTF1-206ENST00000560447 BIRC5O15392 142 aa10□□□□□ -0.81
RTF1-206ENST00000560447 CA12O43570 354 aa10□□□□□ -0.81
RTF1-206ENST00000560447 AP1G2O75843 785 aa10□□□□□ -0.81
RTF1-206ENST00000560447 UBOX5O94941 541 aa10□□□□□ -0.81
RTF1-206ENST00000560447 ALDH1A1P00352 501 aa10□□□□□ -0.81
RTF1-206ENST00000560447 LTFP02788 710 aa10□□□□□ -0.81
RTF1-206ENST00000560447 RARBP10826 455 aa10□□□□□ -0.81
RTF1-206ENST00000560447 GOT1P17174 413 aa10□□□□□ -0.81
RTF1-206ENST00000560447 PGAM1P18669 254 aa10□□□□□ -0.81
RTF1-206ENST00000560447 TFE3P19532 575 aaPredicted RBP10□□□□□ -0.81
RTF1-206ENST00000560447 TYMPP19971 482 aa10□□□□□ -0.81
RTF1-206ENST00000560447 AMPD1P23109 780 aa10□□□□□ -0.81
RTF1-206ENST00000560447 SLC8A1P32418 973 aa10□□□□□ -0.81
RTF1-206ENST00000560447 TM4SF4P48230 202 aa10□□□□□ -0.81
RTF1-206ENST00000560447 NCALDP61601 193 aa10□□□□□ -0.81
RTF1-206ENST00000560447 COG7P83436 770 aa10□□□□□ -0.81
RTF1-206ENST00000560447 SLC10A2Q12908 348 aaPredicted RBP10□□□□□ -0.81
RTF1-206ENST00000560447 DSC3Q14574 896 aa10□□□□□ -0.81
RTF1-206ENST00000560447 NBPF20Q3BBV1 942 aa10□□□□□ -0.81
RTF1-206ENST00000560447 MDH1BQ5I0G3 518 aa10□□□□□ -0.81
RTF1-206ENST00000560447 HP1BP3Q5SSJ5 553 aaPredicted RBP10□□□□□ -0.81
RTF1-206ENST00000560447 ZNF618Q5T7W0 954 aa10□□□□□ -0.81
RTF1-206ENST00000560447 ATG16L1Q676U5 607 aa10□□□□□ -0.81
RTF1-206ENST00000560447 PM20D1Q6GTS8 502 aa10□□□□□ -0.81
RTF1-206ENST00000560447 FAM171BQ6P995 826 aa10□□□□□ -0.81
RTF1-206ENST00000560447 CYB5D1Q6P9G0 228 aa10□□□□□ -0.81
RTF1-206ENST00000560447 UNC5AQ6ZN44 842 aa10□□□□□ -0.81
RTF1-206ENST00000560447 CAPN12Q6ZSI9 719 aa10□□□□□ -0.81
RTF1-206ENST00000560447 ZNF534Q76KX8 674 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms