RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 KCNJ12Q14500 433 aa3.22□□□□□ -1.89
SPG11-222ENST00000560435 ACOX1Q15067 660 aa3.22□□□□□ -1.89
SPG11-222ENST00000560435 ZNF672Q499Z4 452 aaPredicted RBP3.22□□□□□ -1.89
SPG11-222ENST00000560435 GLE1Q53GS7 698 aaKnown RBP3.22□□□□□ -1.89
SPG11-222ENST00000560435 Q5PR19 223 aa3.22□□□□□ -1.89
SPG11-222ENST00000560435 PLAG1Q6DJT9 500 aa3.22□□□□□ -1.89
SPG11-222ENST00000560435 ARMC9Q7Z3E5 817 aa3.22□□□□□ -1.89
SPG11-222ENST00000560435 CTU1Q7Z7A3 348 aaKnown RBP3.22□□□□□ -1.89
SPG11-222ENST00000560435 YAF2Q8IY57 180 aa3.22□□□□□ -1.89
SPG11-222ENST00000560435 PPP1R35Q8TAP8 253 aa3.22□□□□□ -1.89
SPG11-222ENST00000560435 INPP4AQ96PE3 977 aaPredicted RBP3.22□□□□□ -1.89
SPG11-222ENST00000560435 MAP6D1Q9H9H5 199 aa3.22□□□□□ -1.89
SPG11-222ENST00000560435 SPAG4Q9NPE6 437 aa3.22□□□□□ -1.89
SPG11-222ENST00000560435 KRCC1Q9NPI7 259 aaPredicted RBP3.22□□□□□ -1.89
SPG11-222ENST00000560435 MID2Q9UJV3 735 aa3.22□□□□□ -1.89
SPG11-222ENST00000560435 LAMP3Q9UQV4 416 aa3.22□□□□□ -1.89
SPG11-222ENST00000560435 PCDHB2Q9Y5E7 798 aa3.22□□□□□ -1.89
SPG11-222ENST00000560435 PTGDR2Q9Y5Y4 395 aa3.22□□□□□ -1.89
SPG11-222ENST00000560435 USP19O94966 1318 aa3.21□□□□□ -1.89
SPG11-222ENST00000560435 RHODO00212 210 aa3.21□□□□□ -1.9
SPG11-222ENST00000560435 SLC16A5O15375 505 aa3.21□□□□□ -1.9
SPG11-222ENST00000560435 RGS14O43566 566 aa3.21□□□□□ -1.9
SPG11-222ENST00000560435 KRT36O76013 467 aa3.21□□□□□ -1.9
SPG11-222ENST00000560435 MAP4K4O95819 1239 aaPredicted RBP3.21□□□□□ -1.9
SPG11-222ENST00000560435 IL1R1P14778 569 aa3.21□□□□□ -1.9
SPG11-222ENST00000560435 PDLIM4P50479 330 aa3.21□□□□□ -1.9
SPG11-222ENST00000560435 GPS2Q13227 327 aa3.21□□□□□ -1.9
SPG11-222ENST00000560435 KCNAB1Q14722 419 aa3.21□□□□□ -1.9
SPG11-222ENST00000560435 RNF187Q5TA31 235 aaPredicted RBP3.21□□□□□ -1.9
SPG11-222ENST00000560435 ZNF474Q6S9Z5 364 aaPredicted RBP3.21□□□□□ -1.9
SPG11-222ENST00000560435 DHRS13Q6UX07 377 aa3.21□□□□□ -1.9
SPG11-222ENST00000560435 LRIG3Q6UXM1 1119 aa3.21□□□□□ -1.9
SPG11-222ENST00000560435 Q6ZTK2 550 aa3.21□□□□□ -1.9
SPG11-222ENST00000560435 MAEAQ7L5Y9 396 aa3.21□□□□□ -1.9
SPG11-222ENST00000560435 MUC20Q8N307 709 aaPredicted RBP3.21□□□□□ -1.9
SPG11-222ENST00000560435 FAM47BQ8NA70 645 aa3.21□□□□□ -1.9
SPG11-222ENST00000560435 TAF15Q92804 592 aaKnown RBP eCLIP3.21□□□□□ -1.9
SPG11-222ENST00000560435 SPRY4Q9C004 299 aa3.21□□□□□ -1.9
SPG11-222ENST00000560435 TRIM2Q9C040 744 aa3.21□□□□□ -1.9
SPG11-222ENST00000560435 CPNE7Q9UBL6 633 aa3.21□□□□□ -1.9
SPG11-222ENST00000560435 AFF4Q9UHB7 1163 aaKnown RBP3.21□□□□□ -1.9
SPG11-222ENST00000560435 CAPN11Q9UMQ6 739 aa3.21□□□□□ -1.9
SPG11-222ENST00000560435 MAGED2Q9UNF1 606 aaPredicted RBP3.21□□□□□ -1.9
SPG11-222ENST00000560435 HPSEQ9Y251 543 aa3.21□□□□□ -1.9
SPG11-222ENST00000560435 DTX4Q9Y2E6 619 aa3.21□□□□□ -1.9
SPG11-222ENST00000560435 A0A1B0GVT2 93 aa3.2□□□□□ -1.9
SPG11-222ENST00000560435 ISM1B1AKI9 464 aa3.2□□□□□ -1.9
SPG11-222ENST00000560435 KCNQ3O43525 872 aa3.2□□□□□ -1.9
SPG11-222ENST00000560435 CYP1A2P05177 515 aa3.2□□□□□ -1.9
SPG11-222ENST00000560435 PRSS2P07478 247 aa3.2□□□□□ -1.9
SPG11-222ENST00000560435 FCGR1AP12314 374 aa3.2□□□□□ -1.9
SPG11-222ENST00000560435 BTF3P20290 206 aaKnown RBP3.2□□□□□ -1.9
SPG11-222ENST00000560435 CIITAP33076 1130 aa3.2□□□□□ -1.9
SPG11-222ENST00000560435 SEC61A1P61619 476 aaKnown RBP3.2□□□□□ -1.9
SPG11-222ENST00000560435 DSC1Q08554 894 aa3.2□□□□□ -1.9
SPG11-222ENST00000560435 ANXA2RQ3ZCQ2 193 aa3.2□□□□□ -1.9
SPG11-222ENST00000560435 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.2□□□□□ -1.9
SPG11-222ENST00000560435 TTC39AQ5SRH9 613 aa3.2□□□□□ -1.9
SPG11-222ENST00000560435 WBP2NLQ6ICG8 309 aa3.2□□□□□ -1.9
SPG11-222ENST00000560435 SUN3Q8TAQ9 357 aa3.2□□□□□ -1.9
SPG11-222ENST00000560435 ASB12Q8WXK4 309 aa3.2□□□□□ -1.9
SPG11-222ENST00000560435 FAM227BQ96M60 508 aa3.2□□□□□ -1.9
SPG11-222ENST00000560435 ACO2Q99798 780 aaKnown RBP3.2□□□□□ -1.9
SPG11-222ENST00000560435 CHST8Q9H2A9 424 aa3.2□□□□□ -1.9
SPG11-222ENST00000560435 NMRK2Q9NPI5 230 aa3.2□□□□□ -1.9
SPG11-222ENST00000560435 IP6K2Q9UHH9 426 aa3.2□□□□□ -1.9
SPG11-222ENST00000560435 FZD10Q9ULW2 581 aa3.2□□□□□ -1.9
SPG11-222ENST00000560435 BECN2A8MW95 431 aa3.19□□□□□ -1.9
SPG11-222ENST00000560435 GLUD1P00367 558 aa3.19□□□□□ -1.9
SPG11-222ENST00000560435 LCATP04180 440 aa3.19□□□□□ -1.9
SPG11-222ENST00000560435 SP1P08047 785 aa3.19□□□□□ -1.9
SPG11-222ENST00000560435 BRAFP15056 766 aa3.19□□□□□ -1.9
SPG11-222ENST00000560435 HSPA6P17066 643 aa3.19□□□□□ -1.9
SPG11-222ENST00000560435 IGHMBP2P38935 993 aaKnown RBP3.19□□□□□ -1.9
SPG11-222ENST00000560435 PBX1P40424 430 aa3.19□□□□□ -1.9
SPG11-222ENST00000560435 GLUD2P49448 558 aa3.19□□□□□ -1.9
SPG11-222ENST00000560435 CLCN5P51795 746 aa3.19□□□□□ -1.9
SPG11-222ENST00000560435 RPS16P62249 146 aaKnown RBP3.19□□□□□ -1.9
SPG11-222ENST00000560435 ABATP80404 500 aa3.19□□□□□ -1.9
SPG11-222ENST00000560435 EEF1A2Q05639 463 aaKnown RBP3.19□□□□□ -1.9
SPG11-222ENST00000560435 RBM39Q14498 530 aaKnown RBP3.19□□□□□ -1.9
SPG11-222ENST00000560435 ZRSR1Q15695 479 aaKnown RBP3.19□□□□□ -1.9
SPG11-222ENST00000560435 KIAA1755Q5JYT7 1200 aa3.19□□□□□ -1.9
SPG11-222ENST00000560435 HMBOX1Q6NT76 420 aa3.19□□□□□ -1.9
SPG11-222ENST00000560435 KYAT3Q6YP21 454 aaKnown RBP3.19□□□□□ -1.9
SPG11-222ENST00000560435 CREB3L2Q70SY1 520 aa3.19□□□□□ -1.9
SPG11-222ENST00000560435 GPSM1Q86YR5 675 aa3.19□□□□□ -1.9
SPG11-222ENST00000560435 C1QTNF4Q9BXJ3 329 aa3.19□□□□□ -1.9
SPG11-222ENST00000560435 B3GNT5Q9BYG0 378 aa3.19□□□□□ -1.9
SPG11-222ENST00000560435 C22orf23Q9BZE7 217 aa3.19□□□□□ -1.9
SPG11-222ENST00000560435 RXFP3Q9NSD7 469 aa3.19□□□□□ -1.9
SPG11-222ENST00000560435 PLSCR5A0PG75 271 aa3.18□□□□□ -1.9
SPG11-222ENST00000560435 PRR23AA6NEV1 266 aa3.18□□□□□ -1.9
SPG11-222ENST00000560435 FRS3O43559 492 aa3.18□□□□□ -1.9
SPG11-222ENST00000560435 TUSC2O75896 110 aa3.18□□□□□ -1.9
SPG11-222ENST00000560435 ZBTB11O95625 1053 aaPredicted RBP3.18□□□□□ -1.9
SPG11-222ENST00000560435 SERPINB2P05120 415 aa3.18□□□□□ -1.9
SPG11-222ENST00000560435 ARSBP15848 533 aa3.18□□□□□ -1.9
SPG11-222ENST00000560435 YY1P25490 414 aa3.18□□□□□ -1.9
SPG11-222ENST00000560435 SLC8A1P32418 973 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms