RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 PECAM1P16284 738 aaPredicted RBP11.6□□□□□ -0.55
USP3-218ENST00000560202 ZFXP17010 805 aaPredicted RBP11.6□□□□□ -0.55
USP3-218ENST00000560202 TGM2P21980 687 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 CDC25CP30307 473 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 GGCXP38435 758 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 PTGIRP43119 386 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 RGS19P49795 217 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 TPI1P60174 286 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 SLC7A5Q01650 507 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 OTUD4Q01804 1114 aaKnown RBP11.6□□□□□ -0.55
USP3-218ENST00000560202 DHX34Q14147 1143 aaKnown RBP11.6□□□□□ -0.55
USP3-218ENST00000560202 DUSP6Q16828 381 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 DRICH1Q6PGQ1 229 aaPredicted RBP11.6□□□□□ -0.55
USP3-218ENST00000560202 ELMSAN1Q6PJG2 1045 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 POTEHQ6S545 545 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 CHRDL2Q6WN34 429 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 GAREM2Q75VX8 874 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 CCDC105Q8IYK2 499 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 ATP6V0D2Q8N8Y2 350 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 ACTL9Q8TC94 416 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 MRPS31Q92665 395 aaKnown RBP11.6□□□□□ -0.55
USP3-218ENST00000560202 P3H4Q92791 437 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 C1orf74Q96LT6 269 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 PRO3102Q9H379 93 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 PRDM16Q9HAZ2 1276 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 TRPC7Q9HCX4 862 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 ASAH2Q9NR71 780 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 ARHGEF4Q9NR80 690 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 ZDHHC7Q9NXF8 308 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 DMGDHQ9UI17 866 aaKnown RBP11.6□□□□□ -0.55
USP3-218ENST00000560202 XPO7Q9UIA9 1087 aaKnown RBP11.6□□□□□ -0.55
USP3-218ENST00000560202 DNPEPQ9ULA0 475 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 HS3ST4Q9Y661 456 aa11.6□□□□□ -0.55
USP3-218ENST00000560202 XYLBO75191 536 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 MYL4P12829 197 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 PTPN2P17706 415 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 NRIP1P48552 1158 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 KCNQ1P51787 676 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 MLLT6P55198 1093 aaPredicted RBP11.59□□□□□ -0.55
USP3-218ENST00000560202 COG7P83436 770 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 CYP4F8P98187 520 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 BYSLQ13895 437 aaKnown RBP11.59□□□□□ -0.55
USP3-218ENST00000560202 DPYSQ14117 519 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 NUGGCQ68CJ6 796 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 NCBP2-AS2Q69YL0 99 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 TXNDC8Q6A555 127 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 C1orf228Q6PIY5 440 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 NPNTQ6UXI9 565 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 UNC45BQ8IWX7 931 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 ATL2Q8NHH9 583 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 SLC35B2Q8TB61 432 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 NKD2Q969F2 451 aaPredicted RBP11.59□□□□□ -0.55
USP3-218ENST00000560202 BTN2A3PQ96KV6 586 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 GCNAQ96QF7 691 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 PNKPQ96T60 521 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 PARD6BQ9BYG5 372 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 ATXN3LQ9H3M9 355 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 ETNK2Q9NVF9 386 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 HCFC1R1Q9NWW0 138 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 STIM2Q9P246 746 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 FEZ2Q9UHY8 353 aaPredicted RBP11.59□□□□□ -0.55
USP3-218ENST00000560202 HEY1Q9Y5J3 304 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 ZNF638Q14966 1978 aaKnown RBP11.59□□□□□ -0.55
USP3-218ENST00000560202 A0A1W2PRU2 124 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 FAM187AA6NFU0 413 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 HEXIM1O94992 359 aaKnown RBP11.59□□□□□ -0.55
USP3-218ENST00000560202 ECEL1O95672 775 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 OLFM2O95897 454 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 SRGAP2BP0DMP2 458 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 MBL2P11226 248 aaPredicted RBP11.59□□□□□ -0.55
USP3-218ENST00000560202 ERCC2P18074 760 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 HDCP19113 662 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 EPHB2P29323 1055 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 HTR7P34969 479 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 EPHA5P54756 1037 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 VCPP55072 806 aaKnown RBP11.59□□□□□ -0.55
USP3-218ENST00000560202 HNRNPH2P55795 449 aaKnown RBP11.59□□□□□ -0.55
USP3-218ENST00000560202 NRG1Q02297 640 aaPredicted RBP11.59□□□□□ -0.55
USP3-218ENST00000560202 MTA1Q13330 715 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 NOMO1Q15155 1222 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 MS4A13Q5J8X5 152 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 ZNF697Q5TEC3 545 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 PIK3R6Q5UE93 754 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 MANEALQ5VSG8 457 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 JAMLQ86YT9 394 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 GRK7Q8WTQ7 553 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 SLCO2A1Q92959 643 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 PLD4Q96BZ4 506 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 MRPL38Q96DV4 380 aaKnown RBP11.59□□□□□ -0.55
USP3-218ENST00000560202 CCDC114Q96M63 670 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 SLC22A12Q96S37 553 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 CYP2S1Q96SQ9 504 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 HINFPQ9BQA5 517 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 KLF16Q9BXK1 252 aaPredicted RBP11.59□□□□□ -0.55
USP3-218ENST00000560202 PRKD2Q9BZL6 878 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 RASSF4Q9H2L5 321 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 GKN1Q9NS71 199 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 DNMT3BQ9UBC3 853 aaKnown RBP11.59□□□□□ -0.55
USP3-218ENST00000560202 ZNF148Q9UQR1 794 aa11.59□□□□□ -0.55
USP3-218ENST00000560202 DRG1Q9Y295 367 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms