RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 LRRC19Q9H756 370 aa12.61□□□□□ -0.39
HERC1-205ENST00000559886 SFXN1Q9H9B4 322 aa12.61□□□□□ -0.39
HERC1-205ENST00000559886 LMCD1Q9NZU5 365 aa12.61□□□□□ -0.39
HERC1-205ENST00000559886 COLQQ9Y215 455 aaPredicted RBP12.61□□□□□ -0.39
HERC1-205ENST00000559886 SNX10Q9Y5X0 201 aa12.61□□□□□ -0.39
HERC1-205ENST00000559886 HS3ST4Q9Y661 456 aa12.61□□□□□ -0.39
HERC1-205ENST00000559886 TMEM265A0A087WTH1 108 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 CTIFO43310 598 aaKnown RBP12.6□□□□□ -0.39
HERC1-205ENST00000559886 MOSPD3O75425 235 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 STC2O76061 302 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 LRIG2O94898 1065 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 MBL2P11226 248 aaPredicted RBP12.6□□□□□ -0.39
HERC1-205ENST00000559886 GJA1P17302 382 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 DYNLT1P63172 113 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 CCNG2Q16589 344 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 TCEAL5Q5H9L2 206 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 PRSS36Q5K4E3 855 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 ARTNQ5T4W7 220 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 ACBD5Q5T8D3 534 aaPredicted RBP12.6□□□□□ -0.39
HERC1-205ENST00000559886 PIK3R6Q5UE93 754 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 MANEALQ5VSG8 457 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 GRASPQ7Z6J2 395 aaPredicted RBP12.6□□□□□ -0.39
HERC1-205ENST00000559886 KLHL7Q8IXQ5 586 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 PLD5Q8N7P1 536 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 EFHBQ8N7U6 833 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 C12orf76Q8N812 135 aaPredicted RBP12.6□□□□□ -0.39
HERC1-205ENST00000559886 MAB21L3Q8N8X9 362 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 TTC13Q8NBP0 860 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 C1orf54Q8WWF1 131 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 MAGOHBQ96A72 148 aaKnown RBP12.6□□□□□ -0.39
HERC1-205ENST00000559886 TCEAL4Q96EI5 215 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 KRT12Q99456 494 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 DCLK3Q9C098 648 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 IGFLR1Q9H665 355 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 ARHGEF4Q9NR80 690 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 GKN1Q9NS71 199 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 NUP205Q92621 2012 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 SOBPA7XYQ1 873 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 APOC4-APOC2K7ER74 178 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 APOL1O14791 398 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 GLP2RO95838 553 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 APOC2P02655 101 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 ZFXP17010 805 aaPredicted RBP12.6□□□□□ -0.39
HERC1-205ENST00000559886 AMPD1P23109 780 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 DDX6P26196 483 aaKnown RBP eCLIP12.6□□□□□ -0.39
HERC1-205ENST00000559886 CHRNA3P32297 505 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 HTR7P34969 479 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 GGCXP38435 758 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 HARS2P49590 506 aaKnown RBP12.6□□□□□ -0.39
HERC1-205ENST00000559886 TPI1P60174 286 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 SLC7A9P82251 487 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 SLC5A9Q2M3M2 681 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 MS4A13Q5J8X5 152 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 TEX35Q5T0J7 233 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 ATG4AQ8WYN0 398 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 SMG7Q92540 1137 aaKnown RBP12.6□□□□□ -0.39
HERC1-205ENST00000559886 UBXN4Q92575 508 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 AZIN2Q96A70 460 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 SLC46A2Q9BY10 475 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 SLITRK6Q9H5Y7 841 aa12.6□□□□□ -0.39
HERC1-205ENST00000559886 TRAV19A0A0A6YYK7 116 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 TGM2P21980 687 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 HOXC13P31276 330 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 TERF1P54274 439 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 NTHL1P78549 312 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 STXBP5Q5T5C0 1151 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 TMC5Q6UXY8 1006 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 FRMD8P1Q9BZ68 369 aaPredicted RBP12.59□□□□□ -0.39
HERC1-205ENST00000559886 TTYH1Q9H313 450 aaPredicted RBP12.59□□□□□ -0.39
HERC1-205ENST00000559886 PRDM12Q9H4Q4 367 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 PIDD1Q9HB75 910 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 SAE1Q9UBE0 346 aaPredicted RBP12.59□□□□□ -0.39
HERC1-205ENST00000559886 NEU3Q9UQ49 428 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 CLUHO75153 1309 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 ZNF197O14709 1029 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 DCLK1O15075 740 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 KLKB1P03952 638 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 CKMP06732 381 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 COILP38432 576 aaPredicted RBP12.59□□□□□ -0.39
HERC1-205ENST00000559886 FNTAP49354 379 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 ZXDBP98169 803 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 TEAD2Q15562 447 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 ERCC6LQ2NKX8 1250 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 ARHGAP15Q53QZ3 475 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 TTC27Q6P3X3 843 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 DRICH1Q6PGQ1 229 aaPredicted RBP12.59□□□□□ -0.39
HERC1-205ENST00000559886 ZNF683Q8IZ20 524 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 ACTL9Q8TC94 416 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 ADAMTS19Q8TE59 1207 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 HAUS1Q96CS2 278 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 PRMT1Q99873 361 aaKnown RBP12.59□□□□□ -0.39
HERC1-205ENST00000559886 TASP1Q9H6P5 420 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 ETNK2Q9NVF9 386 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 SMPD4Q9NXE4 827 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.59□□□□□ -0.39
HERC1-205ENST00000559886 PCYOX1Q9UHG3 505 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 CPQQ9Y646 472 aa12.59□□□□□ -0.39
HERC1-205ENST00000559886 V9GYY5 206 aaPredicted RBP12.59□□□□□ -0.39
HERC1-205ENST00000559886 E9PAM4 449 aa12.58□□□□□ -0.4
HERC1-205ENST00000559886 DAPK3O43293 454 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms