RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 MICAL1Q8TDZ2 1067 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 NT5C3BQ969T7 300 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 SMARCD1Q96GM5 515 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 LRCH3Q96II8 777 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 RTP3Q9BQQ7 232 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 ACBD6Q9BR61 282 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 POPDC2Q9HBU9 364 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 CNGB3Q9NQW8 809 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 FZD10Q9ULW2 581 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 MYBPHLA2RUH7 354 aa18.4■□□□□ 0.54
SNX1-208ENST00000559844 H7C4K7 107 aa18.4■□□□□ 0.54
SNX1-208ENST00000559844 ZBED1O96006 694 aa18.4■□□□□ 0.54
SNX1-208ENST00000559844 RPL17P18621 184 aaKnown RBP18.4■□□□□ 0.54
SNX1-208ENST00000559844 ARL4AP40617 200 aa18.4■□□□□ 0.54
SNX1-208ENST00000559844 PDIA2Q13087 525 aaKnown RBP18.4■□□□□ 0.54
SNX1-208ENST00000559844 DCAF6Q58WW2 860 aa18.4■□□□□ 0.54
SNX1-208ENST00000559844 PLPP4Q5VZY2 271 aa18.4■□□□□ 0.54
SNX1-208ENST00000559844 PPP1R21Q6ZMI0 780 aa18.4■□□□□ 0.54
SNX1-208ENST00000559844 BNIPLQ7Z465 357 aa18.4■□□□□ 0.54
SNX1-208ENST00000559844 ZBED8Q8IZ13 594 aa18.4■□□□□ 0.54
SNX1-208ENST00000559844 OR10T2Q8NGX3 314 aa18.4■□□□□ 0.54
SNX1-208ENST00000559844 KCTD15Q96SI1 283 aaPredicted RBP18.4■□□□□ 0.54
SNX1-208ENST00000559844 NPY6RQ99463 290 aa18.4■□□□□ 0.54
SNX1-208ENST00000559844 HEY1Q9Y5J3 304 aa18.4■□□□□ 0.54
SNX1-208ENST00000559844 TMEM265A0A087WTH1 108 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.39■□□□□ 0.53
SNX1-208ENST00000559844 E7EVH7 732 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 NDUFAB1O14561 156 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 TSHRP16473 764 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 IRS1P35568 1242 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 ATXN1P54253 815 aaKnown RBP18.39■□□□□ 0.53
SNX1-208ENST00000559844 BASP1P80723 227 aaKnown RBP18.39■□□□□ 0.53
SNX1-208ENST00000559844 RAB41Q5JT25 222 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 BZW1Q7L1Q6 419 aaKnown RBP18.39■□□□□ 0.53
SNX1-208ENST00000559844 CCDC185Q8N715 623 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 SMOQ99835 787 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 ADAM33Q9BZ11 813 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 TTYH1Q9H313 450 aaPredicted RBP18.39■□□□□ 0.53
SNX1-208ENST00000559844 USP29Q9HBJ7 922 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 MTMR10Q9NXD2 777 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 MTRRQ9UBK8 725 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 SSX2IPQ9Y2D8 614 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 E7ESA3 106 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 KCNN4O15554 427 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 CXCL14O95715 111 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 PHBP35232 272 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 AIF1P55008 147 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 DAOAP59103 153 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 ANKRD22Q5VYY1 191 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 RSPO2Q6UXX9 243 aaPredicted RBP18.39■□□□□ 0.53
SNX1-208ENST00000559844 NLRP14Q86W24 1093 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 PDIK1LQ8N165 341 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 ARHGEF2Q92974 986 aaKnown RBP18.39■□□□□ 0.53
SNX1-208ENST00000559844 CSPG4P5Q96PW8 444 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 TMEM209Q96SK2 561 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 FRMD8Q9BZ67 464 aaPredicted RBP18.39■□□□□ 0.53
SNX1-208ENST00000559844 ULBP1Q9BZM6 244 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 RRN3Q9NYV6 651 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 XPO7Q9UIA9 1087 aaKnown RBP18.39■□□□□ 0.53
SNX1-208ENST00000559844 CDY1Q9Y6F8 540 aa18.39■□□□□ 0.53
SNX1-208ENST00000559844 GMNCA6NCL1 334 aa18.38■□□□□ 0.53
SNX1-208ENST00000559844 H3BRJ5 948 aa18.38■□□□□ 0.53
SNX1-208ENST00000559844 M0QYT0 321 aa18.38■□□□□ 0.53
SNX1-208ENST00000559844 CHADO15335 359 aa18.38■□□□□ 0.53
SNX1-208ENST00000559844 NDUFV1P49821 464 aa18.38■□□□□ 0.53
SNX1-208ENST00000559844 NR1H3Q13133 447 aa18.38■□□□□ 0.53
SNX1-208ENST00000559844 INTS6LQ5JSJ4 861 aaKnown RBP18.38■□□□□ 0.53
SNX1-208ENST00000559844 FAM171BQ6P995 826 aa18.38■□□□□ 0.53
SNX1-208ENST00000559844 EXOC3L1Q86VI1 746 aa18.38■□□□□ 0.53
SNX1-208ENST00000559844 TDRPQ86YL5 185 aa18.38■□□□□ 0.53
SNX1-208ENST00000559844 VPS37BQ9H9H4 285 aa18.38■□□□□ 0.53
SNX1-208ENST00000559844 CSNK1G1Q9HCP0 422 aa18.38■□□□□ 0.53
SNX1-208ENST00000559844 BACE2Q9Y5Z0 518 aa18.38■□□□□ 0.53
SNX1-208ENST00000559844 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.38■□□□□ 0.53
SNX1-208ENST00000559844 EXOC1LA0A1B0GW35 172 aa18.37■□□□□ 0.53
SNX1-208ENST00000559844 OR6C75A6NL08 312 aa18.37■□□□□ 0.53
SNX1-208ENST00000559844 HIDE1A8MVS5 230 aa18.37■□□□□ 0.53
SNX1-208ENST00000559844 CAPN9O14815 690 aa18.37■□□□□ 0.53
SNX1-208ENST00000559844 LPXNO60711 386 aa18.37■□□□□ 0.53
SNX1-208ENST00000559844 LILRB3O75022 631 aa18.37■□□□□ 0.53
SNX1-208ENST00000559844 OR4Q2P0C623 313 aa18.37■□□□□ 0.53
SNX1-208ENST00000559844 CHN1P15882 459 aa18.37■□□□□ 0.53
SNX1-208ENST00000559844 ARPP19P56211 112 aa18.37■□□□□ 0.53
SNX1-208ENST00000559844 TSPY1Q01534 308 aa18.37■□□□□ 0.53
SNX1-208ENST00000559844 DEUP1Q05D60 604 aa18.37■□□□□ 0.53
SNX1-208ENST00000559844 MAPRE1Q15691 268 aaKnown RBP18.37■□□□□ 0.53
SNX1-208ENST00000559844 ZNF697Q5TEC3 545 aa18.37■□□□□ 0.53
SNX1-208ENST00000559844 FAM131BQ86XD5 332 aa18.37■□□□□ 0.53
SNX1-208ENST00000559844 ATP11CQ8NB49 1132 aa18.37■□□□□ 0.53
SNX1-208ENST00000559844 PYROXD1Q8WU10 500 aa18.37■□□□□ 0.53
SNX1-208ENST00000559844 IRGQQ8WZA9 623 aa18.37■□□□□ 0.53
SNX1-208ENST00000559844 NDRG1Q92597 394 aaKnown RBP18.37■□□□□ 0.53
SNX1-208ENST00000559844 MYLPFQ96A32 169 aa18.37■□□□□ 0.53
SNX1-208ENST00000559844 XPO6Q96QU8 1125 aaKnown RBP18.37■□□□□ 0.53
SNX1-208ENST00000559844 CLSTN3Q9BQT9 956 aa18.37■□□□□ 0.53
SNX1-208ENST00000559844 PRDM12Q9H4Q4 367 aa18.37■□□□□ 0.53
SNX1-208ENST00000559844 PPANQ9NQ55 473 aaKnown RBP18.37■□□□□ 0.53
SNX1-208ENST00000559844 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.37■□□□□ 0.53
SNX1-208ENST00000559844 ACTL7BQ9Y614 415 aa18.37■□□□□ 0.53
SNX1-208ENST00000559844 IRAK3Q9Y616 596 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms