RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ZNF335Q9H4Z2 1342 aaPredicted RBP4.28□□□□□ -1.72
SPG11-218ENST00000559754 B4DGG1 531 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 KPNA5O15131 536 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 PMM2O15305 246 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 ZSCAN9O15535 394 aaPredicted RBP4.28□□□□□ -1.72
SPG11-218ENST00000559754 CRYABP02511 175 aaKnown RBP4.28□□□□□ -1.72
SPG11-218ENST00000559754 HSP90AA1P07900 732 aaKnown RBP4.28□□□□□ -1.72
SPG11-218ENST00000559754 CBSLP0DN79 551 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 MST1P26927 711 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 HOXA7P31268 230 aaPredicted RBP4.28□□□□□ -1.72
SPG11-218ENST00000559754 CBSP35520 551 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 GSTM5P46439 218 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 STT3AP46977 705 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 TRAPPC10P48553 1259 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 CASP5P51878 434 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 AK2P54819 239 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 IFIT5Q13325 482 aaKnown RBP4.28□□□□□ -1.72
SPG11-218ENST00000559754 ATP1A4Q13733 1029 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 ALFQ53S48 1182 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 TMEM196Q5HYL7 178 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 MANEAQ5SRI9 462 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 CCDC70Q6NSX1 233 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 TFAP2DQ7Z6R9 452 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 CCDC28AQ8IWP9 274 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 FAM186BQ8IYM0 893 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 TEX19Q8NA77 164 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 KAT2BQ92831 832 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 CELF1Q92879 486 aaKnown RBP4.28□□□□□ -1.72
SPG11-218ENST00000559754 GRAMD1AQ96CP6 724 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 NLRP4Q96MN2 994 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 SCNM1Q9BWG6 230 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 TTLL2Q9BWV7 592 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 TRIM2Q9C040 744 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 FAM234AQ9H0X4 552 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 SEMA4BQ9NPR2 832 aaPredicted RBP4.28□□□□□ -1.72
SPG11-218ENST00000559754 DECR2Q9NUI1 292 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 ASNSD1Q9NWL6 643 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 LUZP4Q9P127 313 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 IPO11Q9UI26 975 aaKnown RBP4.28□□□□□ -1.72
SPG11-218ENST00000559754 FAM50BQ9Y247 325 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 IGKV2D-30A0A075B6S6 120 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 IGLV5-39A0A0G2JS06 123 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 A0A1W2PPC4 97 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 SLC22A23A1A5C7 686 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 OR2W5A6NFC9 320 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 FAM90A8PA6NJQ4 464 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 C16orf96A6NNT2 1141 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 APOL1O14791 398 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 PRPF4O43172 522 aaKnown RBP eCLIP4.27□□□□□ -1.73
SPG11-218ENST00000559754 TOMM40O96008 361 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 VIPP01282 170 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 ENO1P06733 434 aaKnown RBP4.27□□□□□ -1.73
SPG11-218ENST00000559754 FAM90A13PP0C7W8 464 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 FAM90A24PP0C7X0 464 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 SETSIPP0DME0 302 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 ST6GAL1P15907 406 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 TSHRP16473 764 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 NDUFS1P28331 727 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 CCKARP32238 428 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 CCKBRP32239 447 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 SLC8A1P32418 973 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 HALP42357 657 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 ALDH7A1P49419 539 aaKnown RBP4.27□□□□□ -1.73
SPG11-218ENST00000559754 PPM1FP49593 454 aaPredicted RBP4.27□□□□□ -1.73
SPG11-218ENST00000559754 LMOD3Q0VAK6 560 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 CHAF1AQ13111 956 aaPredicted RBP4.27□□□□□ -1.73
SPG11-218ENST00000559754 CBFBQ13951 182 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 SLC5A9Q2M3M2 681 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 KLHDC7AQ5VTJ3 777 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 DAB2IPQ5VWQ8 1189 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 C1orf228Q6PIY5 440 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 C9orf47Q6ZRZ4 202 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 KIAA0408Q6ZU52 694 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 TTC30AQ86WT1 665 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 ADGRF4Q8IZF3 695 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 RNF152Q8N8N0 203 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 SLC44A5Q8NCS7 719 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 WIPF2Q8TF74 440 aaPredicted RBP4.27□□□□□ -1.73
SPG11-218ENST00000559754 GLMPQ8WWB7 406 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 IGFBPL1Q8WX77 278 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 ZNF845Q96IR2 970 aaPredicted RBP4.27□□□□□ -1.73
SPG11-218ENST00000559754 LYZL4Q96KX0 146 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 MARK4Q96L34 752 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 MYD88Q99836 296 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 AS3MTQ9HBK9 375 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 ERVK-5Q9HDB9 667 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 STARD7Q9NQZ5 370 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 MAP3K20Q9NYL2 800 aaKnown RBP4.27□□□□□ -1.73
SPG11-218ENST00000559754 ZMYND8Q9ULU4 1186 aaPredicted RBP4.27□□□□□ -1.73
SPG11-218ENST00000559754 GTF2A1LQ9UNN4 478 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 SCINQ9Y6U3 715 aa4.27□□□□□ -1.73
SPG11-218ENST00000559754 EMSYQ7Z589 1322 aa4.26□□□□□ -1.73
SPG11-218ENST00000559754 ABHD14A-ACY1A0A1B0GW23 586 aa4.26□□□□□ -1.73
SPG11-218ENST00000559754 PRYO14603 147 aa4.26□□□□□ -1.73
SPG11-218ENST00000559754 TLX3O43711 291 aaPredicted RBP4.26□□□□□ -1.73
SPG11-218ENST00000559754 SGPL1O95470 568 aa4.26□□□□□ -1.73
SPG11-218ENST00000559754 SYF2O95926 243 aaKnown RBP4.26□□□□□ -1.73
SPG11-218ENST00000559754 IDUAP35475 653 aa4.26□□□□□ -1.73
SPG11-218ENST00000559754 SETQ01105 290 aaPredicted RBP4.26□□□□□ -1.73
SPG11-218ENST00000559754 P3H1Q32P28 736 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms