RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 DNMT3LQ9UJW3 386 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 NEU2Q9Y3R4 380 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 FAM47DPA6NHR8 397 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 ZWINTO95229 277 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 ITIH2P19823 946 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 CENPCQ03188 943 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 TAF1BQ53T94 588 aaPredicted RBP10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 PPP2R2DQ66LE6 453 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 RETSATQ6NUM9 610 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 VSTM1Q6UX27 236 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 SLC39A5Q6ZMH5 540 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 C16orf59Q7L2K0 433 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 MON1AQ86VX9 555 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 TTC30BQ8N4P2 665 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 TMEM121Q9BTD3 319 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 ATP13A1Q9HD20 1204 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 CNGB3Q9NQW8 809 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 TRAV19A0A0A6YYK7 116 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 PSMD3O43242 534 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 SCNN1BP51168 640 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 INTS6LQ5JSJ4 861 aaKnown RBP10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 CDCA2Q69YH5 1023 aaPredicted RBP10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 C11orf63Q6NUN7 778 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 LCLAT1Q6UWP7 414 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 SYDE1Q6ZW31 735 aaPredicted RBP10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 TRIM42Q8IWZ5 723 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 SMG7Q92540 1137 aaKnown RBP10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 NDRG1Q92597 394 aaKnown RBP10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 APOL2Q9BQE5 337 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 NFKBIZQ9BYH8 718 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 CEP41Q9BYV8 373 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 DPEP3Q9H4B8 488 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 RBM22Q9NW64 420 aaKnown RBP eCLIP10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 OR12D3Q9UGF7 316 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 ZC3H7BQ9UGR2 993 aaKnown RBP10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 C15orf41Q9Y2V0 281 aa10.96□□□□□ -0.65
CARMIL3-202ENST00000559694 IGKV6D-21A0A0A0MT36 114 aa10.96□□□□□ -0.66
CARMIL3-202ENST00000559694 KCNK1O00180 336 aa10.96□□□□□ -0.66
CARMIL3-202ENST00000559694 XPO1O14980 1071 aaKnown RBP10.96□□□□□ -0.66
CARMIL3-202ENST00000559694 CDH16O75309 829 aa10.96□□□□□ -0.66
CARMIL3-202ENST00000559694 CDC25CP30307 473 aa10.96□□□□□ -0.66
CARMIL3-202ENST00000559694 PSEN1P49768 467 aa10.96□□□□□ -0.66
CARMIL3-202ENST00000559694 RHOAP61586 193 aa10.96□□□□□ -0.66
CARMIL3-202ENST00000559694 MAB21L3Q8N8X9 362 aa10.96□□□□□ -0.66
CARMIL3-202ENST00000559694 AUTS2Q8WXX7 1259 aa10.96□□□□□ -0.66
CARMIL3-202ENST00000559694 PCED1BQ96HM7 432 aa10.96□□□□□ -0.66
CARMIL3-202ENST00000559694 NAF1Q96HR8 494 aaKnown RBP10.96□□□□□ -0.66
CARMIL3-202ENST00000559694 ACBD6Q9BR61 282 aa10.96□□□□□ -0.66
CARMIL3-202ENST00000559694 DCLK3Q9C098 648 aa10.96□□□□□ -0.66
CARMIL3-202ENST00000559694 NT5MQ9NPB1 228 aa10.96□□□□□ -0.66
CARMIL3-202ENST00000559694 NDFIP2Q9NV92 336 aa10.96□□□□□ -0.66
CARMIL3-202ENST00000559694 NDE1Q9NXR1 346 aa10.96□□□□□ -0.66
CARMIL3-202ENST00000559694 SPECC1L-ADORA2AF8WAN1 911 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 ENPP3O14638 875 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 SYN3O14994 580 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 SPTLC1O15269 473 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 RARAP10276 462 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 PYGMP11217 842 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 SERPINB4P48594 390 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 KPNA2P52292 529 aaKnown RBP10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 MRPS5P82675 430 aaKnown RBP10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 ZNF844Q08AG5 666 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 KYNUQ16719 465 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 PTPN20Q4JDL3 420 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 MEI1Q5TIA1 1274 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 RAP1GAP2Q684P5 730 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 PPHLN1Q8NEY8 458 aaKnown RBP10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 FBXO22Q8NEZ5 403 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 CPXM1Q96SM3 734 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 TRIM56Q9BRZ2 755 aaKnown RBP10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 C11orf84Q9BUA3 381 aaPredicted RBP10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 UBP1Q9NZI7 540 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 SFMBT1Q9UHJ3 866 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 CHMP2BQ9UQN3 213 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 SCN9AQ15858 1988 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 PPEF2O14830 753 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 ATP13A4Q4VNC1 1196 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 KLC3Q6P597 504 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 TRMT10CQ7L0Y3 403 aaKnown RBP10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 RNF135Q8IUD6 432 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 PCDHB18PQ96TA0 734 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 GAS2L1Q99501 681 aaPredicted RBP10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 FIS1Q9Y3D6 152 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 A0A1B0GUL6 1792 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 RCCD1A6NED2 376 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 ANXA9O76027 345 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 NOL4O94818 638 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 IQCF3P0C7M6 154 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 ZNF143P52747 638 aaPredicted RBP10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 TMPRSS15P98073 1019 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 GHRHRQ02643 423 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 SMARCB1Q12824 385 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 PDCD2Q16342 344 aaPredicted RBP10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 MARC1Q5VT66 337 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 NAPEPLDQ6IQ20 393 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 PHF13Q86YI8 300 aaPredicted RBP10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 DENND1CQ8IV53 801 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 EPS8L3Q8TE67 593 aaKnown RBP10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 SCG3Q8WXD2 468 aaKnown RBP10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 DCUN1D1Q96GG9 259 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms