RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 ZBED6P86452 979 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 CUL3Q13618 768 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 DPY19L1Q2PZI1 675 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 CCDC181Q5TID7 509 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 CNKSR3Q6P9H4 555 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 CACNA2D4Q7Z3S7 1137 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 APBB1IPQ7Z5R6 666 aaPredicted RBP7.4□□□□□ -1.22
ZEB1-216ENST00000559496 CTU1Q7Z7A3 348 aaKnown RBP7.4□□□□□ -1.22
ZEB1-216ENST00000559496 FAM129CQ86XR2 697 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 THNSL1Q8IYQ7 743 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 FAM169BQ8N8A8 192 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 P3H4Q92791 437 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 DEFB118Q96PH6 123 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 ADPGKQ9BRR6 497 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 CELF4Q9BZC1 486 aaKnown RBP7.4□□□□□ -1.22
ZEB1-216ENST00000559496 EDEM3Q9BZQ6 932 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 TMEM117Q9H0C3 514 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 INTS2Q9H0H0 1204 aaKnown RBP7.4□□□□□ -1.22
ZEB1-216ENST00000559496 GANQ9H2C0 597 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 EBF2Q9HAK2 575 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 TMEM8AQ9HCN3 771 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 SLC40A1Q9NP59 571 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 PARD6AQ9NPB6 346 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 PLCB1Q9NQ66 1216 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 STARD7Q9NQZ5 370 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 PAPOLBQ9NRJ5 636 aaKnown RBP7.4□□□□□ -1.22
ZEB1-216ENST00000559496 TOPORSQ9NS56 1045 aaPredicted RBP7.4□□□□□ -1.22
ZEB1-216ENST00000559496 ABHD10Q9NUJ1 306 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 AGPAT5Q9NUQ2 364 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 CEP72Q9P209 647 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 TRPV2Q9Y5S1 764 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 BACE2Q9Y5Z0 518 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 GMEB1Q9Y692 573 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 CDY2AQ9Y6F7 541 aa7.4□□□□□ -1.22
ZEB1-216ENST00000559496 ENO4A6NNW6 628 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 DNM1LO00429 736 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 PMM2O15305 246 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 CREB3O43889 395 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 BUB1BO60566 1050 aaPredicted RBP7.39□□□□□ -1.23
ZEB1-216ENST00000559496 NOL4O94818 638 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 PENKP01210 267 aaPredicted RBP7.39□□□□□ -1.23
ZEB1-216ENST00000559496 CLTAP09496 248 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 HSPA8P11142 646 aaKnown RBP7.39□□□□□ -1.23
ZEB1-216ENST00000559496 ATF4P18848 351 aaPredicted RBP7.39□□□□□ -1.23
ZEB1-216ENST00000559496 TNNI1P19237 187 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 AXLP30530 894 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 THPOP40225 353 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 POLR2FP61218 127 aaKnown RBP7.39□□□□□ -1.23
ZEB1-216ENST00000559496 OSTNP61366 133 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 APBA1Q02410 837 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 SURF1Q15526 300 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 KYAT1Q16773 422 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 DCAF4L1Q3SXM0 396 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 EPC2Q52LR7 807 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 KLHDC7AQ5VTJ3 777 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 NUGGCQ68CJ6 796 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 LMBRD2Q68DH5 695 aaPredicted RBP7.39□□□□□ -1.23
ZEB1-216ENST00000559496 KRT39Q6A163 491 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 ZNF280DQ6N043 979 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 NOTUMQ6P988 496 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 PDXDC1Q6P996 788 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 BZW1Q7L1Q6 419 aaKnown RBP7.39□□□□□ -1.23
ZEB1-216ENST00000559496 RRAGAQ7L523 313 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 TMEM139Q8IV31 216 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 TEX9Q8N6V9 391 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 BCAS4Q8TDM0 211 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 PPP1R14BQ96C90 147 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 ANAPC16Q96DE5 110 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 DNAJC7Q99615 494 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 CGRRF1Q99675 332 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 NAA15Q9BXJ9 866 aaKnown RBP7.39□□□□□ -1.23
ZEB1-216ENST00000559496 TRIM4Q9C037 500 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 ZCCHC4Q9H5U6 513 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 RPF1Q9H9Y2 349 aaKnown RBP7.39□□□□□ -1.23
ZEB1-216ENST00000559496 NLRC4Q9NPP4 1024 aa7.39□□□□□ -1.23
ZEB1-216ENST00000559496 TRMT13Q9NUP7 481 aaKnown RBP7.39□□□□□ -1.23
ZEB1-216ENST00000559496 ZNHIT6Q9NWK9 470 aaKnown RBP7.39□□□□□ -1.23
ZEB1-216ENST00000559496 CPSF3Q9UKF6 684 aaKnown RBP7.39□□□□□ -1.23
ZEB1-216ENST00000559496 LRRC53A6NM62 1247 aa7.38□□□□□ -1.23
ZEB1-216ENST00000559496 F8VZ95 297 aa7.38□□□□□ -1.23
ZEB1-216ENST00000559496 ARVCFO00192 962 aa7.38□□□□□ -1.23
ZEB1-216ENST00000559496 ARHGAP6O43182 974 aa7.38□□□□□ -1.23
ZEB1-216ENST00000559496 IL18RAPO95256 599 aa7.38□□□□□ -1.23
ZEB1-216ENST00000559496 NPTXRO95502 500 aa7.38□□□□□ -1.23
ZEB1-216ENST00000559496 CHRNA1P02708 482 aa7.38□□□□□ -1.23
ZEB1-216ENST00000559496 STAG3L1P0CL83 205 aa7.38□□□□□ -1.23
ZEB1-216ENST00000559496 CXCL8P10145 99 aa7.38□□□□□ -1.23
ZEB1-216ENST00000559496 UCHL3P15374 230 aa7.38□□□□□ -1.23
ZEB1-216ENST00000559496 PFKLP17858 780 aa7.38□□□□□ -1.23
ZEB1-216ENST00000559496 NAT1P18440 290 aa7.38□□□□□ -1.23
ZEB1-216ENST00000559496 HOXA11P31270 313 aaPredicted RBP7.38□□□□□ -1.23
ZEB1-216ENST00000559496 ZNF143P52747 638 aaPredicted RBP7.38□□□□□ -1.23
ZEB1-216ENST00000559496 PSMC1P62191 440 aaKnown RBP7.38□□□□□ -1.23
ZEB1-216ENST00000559496 MGAT3Q09327 533 aa7.38□□□□□ -1.23
ZEB1-216ENST00000559496 BIRC3Q13489 604 aa7.38□□□□□ -1.23
ZEB1-216ENST00000559496 RAPGEF1Q13905 1077 aa7.38□□□□□ -1.23
ZEB1-216ENST00000559496 KBTBD12Q3ZCT8 623 aa7.38□□□□□ -1.23
ZEB1-216ENST00000559496 MFSD4BQ5TF39 518 aa7.38□□□□□ -1.23
ZEB1-216ENST00000559496 SFMBT2Q5VUG0 894 aa7.38□□□□□ -1.23
ZEB1-216ENST00000559496 DPY19L2P1Q6NXN4 242 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms