RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 E2F5Q15329 346 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 PLK5Q496M5 336 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 FNDC3BQ53EP0 1204 aaKnown RBP8.5□□□□□ -1.05
SNX1-207ENST00000559401 FAM133BQ5BKY9 247 aaKnown RBP8.5□□□□□ -1.05
SNX1-207ENST00000559401 FAM102AQ5T9C2 384 aaPredicted RBP8.5□□□□□ -1.05
SNX1-207ENST00000559401 PIK3R6Q5UE93 754 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 NAA35Q5VZE5 725 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 RAP1GAP2Q684P5 730 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 SMYD5Q6GMV2 418 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 NADSYN1Q6IA69 706 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 KIAA1211LQ6NV74 962 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 DPY19L2P1Q6NXN4 242 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 OLFML1Q6UWY5 402 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 SERPINA13PQ6UXR4 307 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 CHST9Q7L1S5 443 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 BEND5Q7L4P6 421 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 ARMCX6Q7L4S7 300 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 C11orf74Q86VG3 221 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 ERICH1Q86X53 443 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 CACUL1Q86Y37 369 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 MFN1Q8IWA4 741 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 LGI2Q8N0V4 545 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 CFAP52Q8N1V2 620 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 CARNMT1Q8N4J0 409 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 ZNF557Q8N988 423 aaPredicted RBP8.5□□□□□ -1.05
SNX1-207ENST00000559401 C12orf50Q8NA57 414 aaPredicted RBP8.5□□□□□ -1.05
SNX1-207ENST00000559401 EPS8L1Q8TE68 723 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 WFIKKN2Q8TEU8 576 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 SLC20A1Q8WUM9 679 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 SORCS1Q8WY21 1168 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 C18orf8Q96DM3 657 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 BTN2A3PQ96KV6 586 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 PRICKLE1Q96MT3 831 aaPredicted RBP8.5□□□□□ -1.05
SNX1-207ENST00000559401 NAA15Q9BXJ9 866 aaKnown RBP8.5□□□□□ -1.05
SNX1-207ENST00000559401 NUCKS1Q9H1E3 243 aaKnown RBP8.5□□□□□ -1.05
SNX1-207ENST00000559401 DUSP15Q9H1R2 295 aaPredicted RBP8.5□□□□□ -1.05
SNX1-207ENST00000559401 ABCB8Q9NUT2 735 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 SEPT11Q9NVA2 429 aaKnown RBP8.5□□□□□ -1.05
SNX1-207ENST00000559401 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.5□□□□□ -1.05
SNX1-207ENST00000559401 ASNSD1Q9NWL6 643 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 ELOVL2Q9NXB9 296 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 CALCOCO1Q9P1Z2 691 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 GGA2Q9UJY4 613 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 STOML2Q9UJZ1 356 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 FBXO10Q9UK96 956 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 HCN2Q9UL51 889 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.5□□□□□ -1.05
SNX1-207ENST00000559401 GPR179Q6PRD1 2367 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 CEP192Q8TEP8 1941 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 PLXND1Q9Y4D7 1925 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 A0A1W2PQF6 199 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 SYCE3A1L190 88 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 F5H5T6 163 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 H0Y626 953 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 M0QYT0 321 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 GFRA2O00451 464 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 NPC1O15118 1278 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 EPHB6O15197 1021 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 LRP3O75074 770 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 EPN2O95208 641 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 LSM8O95777 96 aaKnown RBP8.49□□□□□ -1.05
SNX1-207ENST00000559401 EPHX1P07099 455 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 SLC2A3P11169 496 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 PABPC1P11940 636 aaKnown RBP8.49□□□□□ -1.05
SNX1-207ENST00000559401 POLR2EP19388 210 aaKnown RBP8.49□□□□□ -1.05
SNX1-207ENST00000559401 NDUFV2P19404 249 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 TACR2P21452 398 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 HLA-FP30511 346 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 CCR1P32246 355 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 MPLP40238 635 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 P2RY2P41231 377 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 IL12RB1P42701 662 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 SULT1E1P49888 294 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 ZNF165P49910 485 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 RPS24P62847 133 aaKnown RBP8.49□□□□□ -1.05
SNX1-207ENST00000559401 ZNF234Q14588 700 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 NCAPHQ15003 741 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 CSRP2Q16527 193 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 FILIP1LQ4L180 1135 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 AASDHQ4L235 1098 aaPredicted RBP8.49□□□□□ -1.05
SNX1-207ENST00000559401 C2CD6Q53TS8 623 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 MS4A13Q5J8X5 152 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 PRR23CQ6ZRP0 262 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 SND1Q7KZF4 910 aaKnown RBP eCLIP8.49□□□□□ -1.05
SNX1-207ENST00000559401 LPCAT2Q7L5N7 544 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 SLC26A9Q7LBE3 791 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 CYP2U1Q7Z449 544 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 ZDHHC17Q8IUH5 632 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 TMEFF1Q8IYR6 380 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 AHI1Q8N157 1196 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 FRMD1Q8N878 549 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 ZNF366Q8N895 744 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 WFDC5Q8TCV5 224 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 CYB5D2Q8WUJ1 264 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 CPA5Q8WXQ8 436 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 AZIN2Q96A70 460 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 SLC39A13Q96H72 371 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 LOXL4Q96JB6 756 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 ZC3H10Q96K80 434 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms