RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 GAD2Q05329 585 aa22.46■■□□□ 1.19
SNX1-206ENST00000559389 PIGHQ14442 188 aaPredicted RBP22.46■■□□□ 1.19
SNX1-206ENST00000559389 ACAP1Q15027 740 aa22.46■■□□□ 1.19
SNX1-206ENST00000559389 RAP1GAP2Q684P5 730 aa22.46■■□□□ 1.19
SNX1-206ENST00000559389 TPGS1Q6ZTW0 290 aa22.46■■□□□ 1.19
SNX1-206ENST00000559389 TPRG1Q6ZUI0 275 aa22.46■■□□□ 1.19
SNX1-206ENST00000559389 RALGPS2Q86X27 583 aaPredicted RBP22.46■■□□□ 1.19
SNX1-206ENST00000559389 ARFGAP1Q8N6T3 406 aa22.46■■□□□ 1.19
SNX1-206ENST00000559389 SLC35G2Q8TBE7 412 aa22.46■■□□□ 1.19
SNX1-206ENST00000559389 IRX2Q9BZI1 471 aaPredicted RBP22.46■■□□□ 1.19
SNX1-206ENST00000559389 TMPRSS4Q9NRS4 437 aa22.46■■□□□ 1.19
SNX1-206ENST00000559389 TFR2Q9UP52 801 aa22.46■■□□□ 1.19
SNX1-206ENST00000559389 HS3ST4Q9Y661 456 aa22.46■■□□□ 1.19
SNX1-206ENST00000559389 MYO1FO00160 1098 aa22.45■■□□□ 1.18
SNX1-206ENST00000559389 NRDCO43847 1150 aa22.45■■□□□ 1.18
SNX1-206ENST00000559389 LRCH4O75427 683 aa22.45■■□□□ 1.18
SNX1-206ENST00000559389 RNF8O76064 485 aa22.45■■□□□ 1.18
SNX1-206ENST00000559389 TACR2P21452 398 aa22.45■■□□□ 1.18
SNX1-206ENST00000559389 KRT83P78385 493 aa22.45■■□□□ 1.18
SNX1-206ENST00000559389 SCAPQ12770 1279 aa22.45■■□□□ 1.18
SNX1-206ENST00000559389 FYB2Q5VWT5 728 aa22.45■■□□□ 1.18
SNX1-206ENST00000559389 RFWD3Q6PCD5 774 aa22.45■■□□□ 1.18
SNX1-206ENST00000559389 SIX5Q8N196 739 aa22.45■■□□□ 1.18
SNX1-206ENST00000559389 CCDC185Q8N715 623 aa22.45■■□□□ 1.18
SNX1-206ENST00000559389 HAPLN3Q96S86 360 aa22.45■■□□□ 1.18
SNX1-206ENST00000559389 BBS2Q9BXC9 721 aa22.45■■□□□ 1.18
SNX1-206ENST00000559389 LCMT1Q9UIC8 334 aa22.45■■□□□ 1.18
SNX1-206ENST00000559389 A0A0A6YYK5 440 aaPredicted RBP22.44■■□□□ 1.18
SNX1-206ENST00000559389 RCCD1A6NED2 376 aa22.44■■□□□ 1.18
SNX1-206ENST00000559389 NEDD8-MDP1E9PL57 170 aa22.44■■□□□ 1.18
SNX1-206ENST00000559389 TRDMT1O14717 391 aaKnown RBP22.44■■□□□ 1.18
SNX1-206ENST00000559389 CACNG3O60359 315 aa22.44■■□□□ 1.18
SNX1-206ENST00000559389 ADRA1BP35368 520 aa22.44■■□□□ 1.18
SNX1-206ENST00000559389 GGCXP38435 758 aa22.44■■□□□ 1.18
SNX1-206ENST00000559389 SGSHP51688 502 aa22.44■■□□□ 1.18
SNX1-206ENST00000559389 HADHBP55084 474 aaKnown RBP22.44■■□□□ 1.18
SNX1-206ENST00000559389 ANO4Q32M45 955 aa22.44■■□□□ 1.18
SNX1-206ENST00000559389 ARL13BQ3SXY8 428 aa22.44■■□□□ 1.18
SNX1-206ENST00000559389 MPPE1Q53F39 396 aa22.44■■□□□ 1.18
SNX1-206ENST00000559389 C1orf228Q6PIY5 440 aa22.44■■□□□ 1.18
SNX1-206ENST00000559389 TRIM67Q6ZTA4 783 aa22.44■■□□□ 1.18
SNX1-206ENST00000559389 C12orf40Q86WS4 652 aa22.44■■□□□ 1.18
SNX1-206ENST00000559389 ETFBKMTQ8IXQ9 262 aa22.44■■□□□ 1.18
SNX1-206ENST00000559389 MYEOVQ96EZ4 313 aa22.44■■□□□ 1.18
SNX1-206ENST00000559389 NCAPGQ9BPX3 1015 aa22.44■■□□□ 1.18
SNX1-206ENST00000559389 F5H5T6 163 aa22.43■■□□□ 1.18
SNX1-206ENST00000559389 PJA2O43164 708 aa22.43■■□□□ 1.18
SNX1-206ENST00000559389 TSPAN3O60637 253 aa22.43■■□□□ 1.18
SNX1-206ENST00000559389 PROSCO94903 275 aa22.43■■□□□ 1.18
SNX1-206ENST00000559389 CYBBP04839 570 aa22.43■■□□□ 1.18
SNX1-206ENST00000559389 PTMAP06454 111 aaKnown RBP22.43■■□□□ 1.18
SNX1-206ENST00000559389 TYRP14679 529 aa22.43■■□□□ 1.18
SNX1-206ENST00000559389 MIPP30301 263 aa22.43■■□□□ 1.18
SNX1-206ENST00000559389 MAN1A1P33908 653 aa22.43■■□□□ 1.18
SNX1-206ENST00000559389 PCK1P35558 622 aa22.43■■□□□ 1.18
SNX1-206ENST00000559389 OPRD1P41143 372 aa22.43■■□□□ 1.18
SNX1-206ENST00000559389 EIF2DP41214 584 aaKnown RBP22.43■■□□□ 1.18
SNX1-206ENST00000559389 AIF1P55008 147 aa22.43■■□□□ 1.18
SNX1-206ENST00000559389 STARD6P59095 220 aa22.43■■□□□ 1.18
SNX1-206ENST00000559389 ACBD5Q5T8D3 534 aaPredicted RBP22.43■■□□□ 1.18
SNX1-206ENST00000559389 DAB2IPQ5VWQ8 1189 aa22.43■■□□□ 1.18
SNX1-206ENST00000559389 RNF43Q68DV7 783 aa22.43■■□□□ 1.18
SNX1-206ENST00000559389 NAIF1Q69YI7 327 aaPredicted RBP22.43■■□□□ 1.18
SNX1-206ENST00000559389 TXNDC11Q6PKC3 985 aa22.43■■□□□ 1.18
SNX1-206ENST00000559389 CYP4V2Q6ZWL3 525 aaPredicted RBP22.43■■□□□ 1.18
SNX1-206ENST00000559389 KIAA1328Q86T90 577 aa22.43■■□□□ 1.18
SNX1-206ENST00000559389 LGI2Q8N0V4 545 aa22.43■■□□□ 1.18
SNX1-206ENST00000559389 HJURPQ8NCD3 748 aaPredicted RBP22.43■■□□□ 1.18
SNX1-206ENST00000559389 PEBP4Q96S96 227 aa22.43■■□□□ 1.18
SNX1-206ENST00000559389 LACRTQ9GZZ8 138 aa22.43■■□□□ 1.18
SNX1-206ENST00000559389 ADGRG1Q9Y653 693 aa22.43■■□□□ 1.18
SNX1-206ENST00000559389 BTNL10A8MVZ5 291 aa22.42■■□□□ 1.18
SNX1-206ENST00000559389 HOXD9P28356 352 aaPredicted RBP22.42■■□□□ 1.18
SNX1-206ENST00000559389 AMPD2Q01433 879 aa22.42■■□□□ 1.18
SNX1-206ENST00000559389 CCDC173Q0VFZ6 552 aa22.42■■□□□ 1.18
SNX1-206ENST00000559389 AUHQ13825 339 aaKnown RBP22.42■■□□□ 1.18
SNX1-206ENST00000559389 MPP7Q5T2T1 576 aa22.42■■□□□ 1.18
SNX1-206ENST00000559389 SCYL2Q6P3W7 929 aa22.42■■□□□ 1.18
SNX1-206ENST00000559389 SLFN11Q7Z7L1 901 aa22.42■■□□□ 1.18
SNX1-206ENST00000559389 ZNF683Q8IZ20 524 aa22.42■■□□□ 1.18
SNX1-206ENST00000559389 TXLNBQ8N3L3 684 aa22.42■■□□□ 1.18
SNX1-206ENST00000559389 BHMTQ93088 406 aa22.42■■□□□ 1.18
SNX1-206ENST00000559389 SHDQ96IW2 340 aa22.42■■□□□ 1.18
SNX1-206ENST00000559389 C1orf74Q96LT6 269 aa22.42■■□□□ 1.18
SNX1-206ENST00000559389 PLK2Q9NYY3 685 aa22.42■■□□□ 1.18
SNX1-206ENST00000559389 FZD10Q9ULW2 581 aa22.42■■□□□ 1.18
SNX1-206ENST00000559389 SNX10Q9Y5X0 201 aa22.42■■□□□ 1.18
SNX1-206ENST00000559389 MAN2B1O00754 1011 aa22.41■■□□□ 1.18
SNX1-206ENST00000559389 RPS24P62847 133 aaKnown RBP22.41■■□□□ 1.18
SNX1-206ENST00000559389 NRG1Q02297 640 aaPredicted RBP22.41■■□□□ 1.18
SNX1-206ENST00000559389 EFHC2Q5JST6 749 aa22.41■■□□□ 1.18
SNX1-206ENST00000559389 ARTNQ5T4W7 220 aa22.41■■□□□ 1.18
SNX1-206ENST00000559389 MANEALQ5VSG8 457 aa22.41■■□□□ 1.18
SNX1-206ENST00000559389 FBXL22Q6P050 247 aa22.41■■□□□ 1.18
SNX1-206ENST00000559389 DDI1Q8WTU0 396 aa22.41■■□□□ 1.18
SNX1-206ENST00000559389 FAM3CQ92520 227 aa22.41■■□□□ 1.18
SNX1-206ENST00000559389 TMA16Q96EY4 203 aaKnown RBP22.41■■□□□ 1.18
SNX1-206ENST00000559389 PPP1R9BQ96SB3 815 aa22.41■■□□□ 1.18
SNX1-206ENST00000559389 SNRNP25Q9BV90 132 aaKnown RBP22.41■■□□□ 1.18
SNX1-206ENST00000559389 SIK2Q9H0K1 926 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms